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Carg23950 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23950
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF3511)
Genome locationCarg_Chr12:3953149..3953478
RNA-Seq ExpressionCarg23950
SyntenyCarg23950
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585752.1 hypothetical protein SDJN03_18485, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5199.08Show/hide
Query:  MDGRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGK
        MDGRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGST SSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGK
Subjt:  MDGRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGK

Query:  YTQILYGWW
        YTQILYGWW
Subjt:  YTQILYGWW

KAG6598609.1 hypothetical protein SDJN03_08387, partial [Cucurbita argyrosperma subsp. sororia]5.1e-2462.86Show/hide
Query:  SSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQI
        SS M+IESYYGPP+         +QI GKK KR+SG               S+SK ++F DPEFQRKKRVASYKMYSVEGKMKGSFR SFRWLK KYTQ+
Subjt:  SSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQI

Query:  LYGWW
        LYGWW
Subjt:  LYGWW

KAG7020663.1 hypothetical protein SDJN02_17349, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-53100Show/hide
Query:  MDGRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGK
        MDGRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGK
Subjt:  MDGRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGK

Query:  YTQILYGWW
        YTQILYGWW
Subjt:  YTQILYGWW

KAG7029545.1 hypothetical protein SDJN02_07884, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-2462.86Show/hide
Query:  SSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQI
        SS M+IESYYGPP+         +QI GKK KR+SG               S+SK ++F DPEFQRKKRVASYKMYSVEGKMKGSFR SFRWLK KYTQ+
Subjt:  SSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQI

Query:  LYGWW
        LYGWW
Subjt:  LYGWW

XP_021596675.1 uncharacterized protein LOC110603285 [Manihot esculenta]1.9e-2355.2Show/hide
Query:  SSCMEIESYYGPPRPPP----------PSSYPQTQISG----------KKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEG
        S+ M++ESYYGPPRPP            +SY QTQ++           KKGK+ SG +SSSSS          SK W   DPEFQRKKRVASYKMYSVEG
Subjt:  SSCMEIESYYGPPRPPP----------PSSYPQTQISG----------KKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEG

Query:  KMKGSFRNSFRWLKGKYTQILYGWW
        K+KGSFR SFRWLK  +TQ++YGWW
Subjt:  KMKGSFRNSFRWLKGKYTQILYGWW

TrEMBL top hitse value%identityAlignment
A0A251IZ93 Uncharacterized protein9.4e-2455.2Show/hide
Query:  SSCMEIESYYGPPRPPP----------PSSYPQTQISG----------KKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEG
        S+ M++ESYYGPPRPP            +SY QTQ++           KKGK+ SG +SSSSS          SK W   DPEFQRKKRVASYKMYSVEG
Subjt:  SSCMEIESYYGPPRPPP----------PSSYPQTQISG----------KKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEG

Query:  KMKGSFRNSFRWLKGKYTQILYGWW
        K+KGSFR SFRWLK  +TQ++YGWW
Subjt:  KMKGSFRNSFRWLKGKYTQILYGWW

A0A5A7VGY1 Uncharacterized protein1.2e-2362.96Show/hide
Query:  GRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRF-GDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKY
        G SS MEIE YYGP          ++Q+S KKGK TSG               S+SK WRF  DPEFQRKKRVASYKMYSVEGKMKGSFR SFRWLK KY
Subjt:  GRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRF-GDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKY

Query:  TQILYGWW
        TQ+LYGWW
Subjt:  TQILYGWW

A0A5N6RKJ1 Uncharacterized protein1.8e-2261.76Show/hide
Query:  MEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYG
        M++ SYYGPP P P SSY     S    +   GS          S+S  +SK W FGDPEFQRKKRVASYKMYSVEGKMKGS R SFRWLK KYTQ+LYG
Subjt:  MEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYG

Query:  WW
        WW
Subjt:  WW

A0A6P3ZT47 uncharacterized protein LOC1074200713.0e-2257.63Show/hide
Query:  MEIESYYGPPRPPPPS--------SYPQTQ--------ISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFR
        M++E+YYGPP   P S        SY QTQ        I  KKGK TSGS+S S               W F DPEFQRKKRVASYKMYSVEGKMKGSFR
Subjt:  MEIESYYGPPRPPPPS--------SYPQTQ--------ISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFR

Query:  NSFRWLKGKYTQILYGWW
         SFRWLK KYTQ++YGWW
Subjt:  NSFRWLKGKYTQILYGWW

W9R3W8 Uncharacterized protein1.2e-2357.26Show/hide
Query:  SSCMEIESYYGPPRPPPPSSYPQTQISG------------KKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRN
        S  M+I++YYGPPR    +S+ QTQ+              KKGK  SGS              S+SKPW FGDPEFQRKKRVASYKMYSVEGK+KGSFR 
Subjt:  SSCMEIESYYGPPRPPPPSSYPQTQISG------------KKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRN

Query:  SFRWLKGKYTQILYGWW
        SFRWLK KYTQ++YGWW
Subjt:  SFRWLKGKYTQILYGWW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19460.1 Protein of unknown function (DUF3511)1.3e-0938.32Show/hide
Query:  DGRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGS---TSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLK
        DGR+S  +++ Y    R   P S+    +   +   TS +   T      +      S+S  W F DP+ QRKKRV SY+ Y+VEGK+KGSFR SF+W+K
Subjt:  DGRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGS---TSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLK

Query:  GKYTQIL
         K  ++L
Subjt:  GKYTQIL

AT2G47480.1 Protein of unknown function (DUF3511)5.6e-0535.48Show/hide
Query:  YGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILY
        YG  R     S  + QI G +    S        ++  S++ S+ +     D E +RKKR+A YK Y+VEGK+K + +N FRW+K K  QI++
Subjt:  YGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILY

AT3G13910.1 Protein of unknown function (DUF3511)3.5e-0744.12Show/hide
Query:  SGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLK
        +G + +          S S  ++  + S+ W F DPE +RK+RVA YK+YSVE KMKGS R SF+W K
Subjt:  SGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLK

AT3G62640.1 Protein of unknown function (DUF3511)1.2e-0736.25Show/hide
Query:  TQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYG
        TQ+   +        S      S S + +T+ PWR  D E +RKKR+A+YK Y++EGK+K + +  F W+K +Y+ I++G
Subjt:  TQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYG

AT5G11970.1 Protein of unknown function (DUF3511)1.8e-1975Show/hide
Query:  SCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYGWW
        S + SK W   DPE QRKKRVASYKMY VEGK+KGSFRNSFRWLK +YTQ++YGWW
Subjt:  SCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYGWW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAAGGTCGTCATGCATGGAGATAGAAAGCTATTATGGCCCTCCAAGGCCTCCTCCCCCTTCCTCCTATCCACAAACCCAGATTTCAGGTAAGAAAGGTAAAAG
AACTTCTGGGTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCATCTTGTTCAACATCAAAGCCATGGAGATTTGGAGACCCTGAGTTTCAGAGGAAGAAAAGGG
TTGCGAGTTACAAGATGTACTCTGTTGAAGGCAAGATGAAGGGGTCCTTCAGGAACAGCTTCAGATGGCTCAAGGGTAAGTACACCCAGATCCTTTATGGCTGGTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAAGGTCGTCATGCATGGAGATAGAAAGCTATTATGGCCCTCCAAGGCCTCCTCCCCCTTCCTCCTATCCACAAACCCAGATTTCAGGTAAGAAAGGTAAAAG
AACTTCTGGGTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCATCTTGTTCAACATCAAAGCCATGGAGATTTGGAGACCCTGAGTTTCAGAGGAAGAAAAGGG
TTGCGAGTTACAAGATGTACTCTGTTGAAGGCAAGATGAAGGGGTCCTTCAGGAACAGCTTCAGATGGCTCAAGGGTAAGTACACCCAGATCCTTTATGGCTGGTGGTGA
Protein sequenceShow/hide protein sequence
MDGRSSCMEIESYYGPPRPPPPSSYPQTQISGKKGKRTSGSTSSSSSSSSCSSSCSTSKPWRFGDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKGKYTQILYGWW