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Carg23951 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23951
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein, putative
Genome locationCarg_Chr12:3950920..3951531
RNA-Seq ExpressionCarg23951
SyntenyCarg23951
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064730.1 putative transmembrane protein [Cucumis melo var. makuwa]3.3e-5364.39Show/hide
Query:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTA--DKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSA
        +AAGM AAIAMIT LCGV  RSRR S PSEASS TA  + K + N S TTT+ +  T   A    + + E E  +KELPLPPKMQQV S SPP++I KSA
Subjt:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTA--DKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSA

Query:  SERRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALP
        SER+L HM S+++KVPRS SV R  L+EG  RRKEK+  E+ IW KTIILGEKC+VSDEEDG+IYEGKGK+I+AYHPR+PSSMSIS+SRQ+SA +AEALP
Subjt:  SERRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALP

Query:  DLGAK
        +  AK
Subjt:  DLGAK

KAG6585751.1 hypothetical protein SDJN03_18484, partial [Cucurbita argyrosperma subsp. sororia]1.5e-9899.01Show/hide
Query:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE
        MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGND  ETEELMKELPLPPKMQQVASPSPPSKIAKSASE
Subjt:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE

Query:  RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL
        RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL
Subjt:  RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL

Query:  GAK
        GAK
Subjt:  GAK

KAG7020662.1 hypothetical protein SDJN02_17348, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-100100Show/hide
Query:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE
        MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE
Subjt:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE

Query:  RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL
        RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL
Subjt:  RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL

Query:  GAK
        GAK
Subjt:  GAK

KGN47811.2 hypothetical protein Csa_018925 [Cucumis sativus]1.6e-5565.02Show/hide
Query:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE
        +AAGM AAI+MIT LCGVRSR RRS+P  ++S   AD K D N S TTT+      P  GE+ N +GE    MKELPLPPKMQQVAS SPPS+I+KSASE
Subjt:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE

Query:  RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL
        R+L HM S+++KVPRS SV R  L+EG  RRKE++  E+ IW KTIILGEKC+VSDEEDG+IYEGKGK+I+AYHPR+PSSMSIS+SRQ+SA++AEAL   
Subjt:  RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL

Query:  GAK
         AK
Subjt:  GAK

XP_023002698.1 uncharacterized protein LOC111496482 [Cucurbita maxima]6.4e-8991.13Show/hide
Query:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE
        MAAGMV AIAMITALCGV  RSRRS  PSEASSKTADKKQDINGSRTTTSSTAG TP AG+SG+D GETEE MKELPLPPKMQQVASPSPPS+IAKSASE
Subjt:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE

Query:  RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL
        RRLKHMT +NM+VPRSHSVARKDLEEGG RRKEKM EEELIW+KTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL
Subjt:  RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL

Query:  GAK
        GAK
Subjt:  GAK

TrEMBL top hitse value%identityAlignment
A0A0A0KD46 Uncharacterized protein1.0e-5264.77Show/hide
Query:  MITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASERRLKHMTSLN
        MIT LCGVRSR RRS+P  ++S   AD K D N S TTT+      P  GE+ N +GE    MKELPLPPKMQQVAS SPPS+I+KSASER+L HM S++
Subjt:  MITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASERRLKHMTSLN

Query:  MKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDLGAK
        +KVPRS SV R  L+EG  RRKE++  E+ IW KTIILGEKC+VSDEEDG+IYEGKGK+I+AYHPR+PSSMSIS+SRQ+SA++AEAL    AK
Subjt:  MKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDLGAK

A0A5A7VC31 Putative transmembrane protein1.6e-5364.39Show/hide
Query:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTA--DKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSA
        +AAGM AAIAMIT LCGV  RSRR S PSEASS TA  + K + N S TTT+ +  T   A    + + E E  +KELPLPPKMQQV S SPP++I KSA
Subjt:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTA--DKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSA

Query:  SERRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALP
        SER+L HM S+++KVPRS SV R  L+EG  RRKEK+  E+ IW KTIILGEKC+VSDEEDG+IYEGKGK+I+AYHPR+PSSMSIS+SRQ+SA +AEALP
Subjt:  SERRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALP

Query:  DLGAK
        +  AK
Subjt:  DLGAK

A0A5E4EDG1 PREDICTED: LR48_Vigan04g2349002.9e-2645.59Show/hide
Query:  AAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQ---QVASP-SPPSKIAKS
        AAGM A IAMITALC  R   R+ SPP   S  +   + D   +    + T  TTP      + + E     KELPLPP+M+   Q+ S  +  + I KS
Subjt:  AAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQ---QVASP-SPPSKIAKS

Query:  ASERRLKHMTSLNMKVPRSHSVARKD--LEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAE
        ASERRL  +++L+MK+PRS S+ARKD   EE   R+  K+  EE IW KTIILGEKC+V DE++  IY+ KG++I AY P+         SRQSS ID  
Subjt:  ASERRLKHMTSLNMKVPRSHSVARKD--LEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAE

Query:  ALPD
        A+PD
Subjt:  ALPD

A0A6A1WQ24 Uncharacterized protein2.4e-2847.32Show/hide
Query:  MAAGMVAAIAMITALCGVRSRSRRSSP-PSEASSKTADKKQDINGSRTTTSSTAGTTP---VAGESGNDDGET---EELMKELPLPPKMQQVASPSPPSK
        +A G+ AAIA ITALCG R   R S P PS    KTA+K    N + TT + T+ T P    A +    +G T   E   +ELPLPP M  +       +
Subjt:  MAAGMVAAIAMITALCGVRSRSRRSSP-PSEASSKTADKKQDINGSRTTTSSTAGTTP---VAGESGNDDGET---EELMKELPLPPKMQQVASPSPPSK

Query:  IAKSASERRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAID
        I KS+S+R L    +L MK+PRS S+ARK   E   +RK+ +  E+ IW KTIILGEKC+V DE+D VIY+GKGKRIS YHP++PS   IS+SR+ S  +
Subjt:  IAKSASERRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAID

Query:  AEALP
         EA P
Subjt:  AEALP

A0A6J1KUB9 uncharacterized protein LOC1114964823.1e-8991.13Show/hide
Query:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE
        MAAGMV AIAMITALCGV  RSRRS  PSEASSKTADKKQDINGSRTTTSSTAG TP AG+SG+D GETEE MKELPLPPKMQQVASPSPPS+IAKSASE
Subjt:  MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASE

Query:  RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL
        RRLKHMT +NM+VPRSHSVARKDLEEGG RRKEKM EEELIW+KTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL
Subjt:  RRLKHMTSLNMKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDL

Query:  GAK
        GAK
Subjt:  GAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G26114.1 unknown protein1.9e-0644.58Show/hide
Query:  VARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRIS---AYHPRSPSSMSISISRQSSAIDAEALP
        V ++D EE    RK+K+  +  I    IILGE+CRV D E+G   E + +R++    Y PRS S  SISISR  S ID  A+P
Subjt:  VARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRIS---AYHPRSPSSMSISISRQSSAIDAEALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTGGAATGGTAGCAGCCATCGCCATGATCACCGCGTTATGCGGCGTCCGATCCCGATCCCGACGAAGCTCGCCGCCTTCCGAAGCTTCATCTAAAACCGCCGA
CAAGAAACAGGACATAAACGGTTCCCGAACGACAACCTCATCAACAGCGGGGACAACCCCAGTAGCTGGAGAATCAGGAAACGACGACGGCGAAACAGAGGAGTTGATGA
AAGAGCTTCCCCTGCCACCAAAAATGCAGCAGGTGGCGAGTCCGAGCCCGCCGAGCAAAATTGCAAAATCGGCATCGGAGAGAAGGCTGAAGCATATGACGAGCTTGAAC
ATGAAAGTTCCGAGGAGCCATTCGGTGGCGAGGAAGGATTTGGAGGAAGGAGGAGGGAGGAGAAAAGAGAAGATGATAGAGGAAGAATTGATATGGCAGAAGACGATAAT
ATTAGGGGAGAAATGCAGAGTTTCAGATGAAGAAGATGGTGTTATTTATGAAGGAAAAGGGAAGAGGATTTCGGCTTATCATCCGAGATCTCCGAGCTCGATGTCGATAT
CGATTTCTCGACAAAGTTCCGCCATTGATGCTGAAGCTCTGCCTGACCTAGGAGCAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTGGAATGGTAGCAGCCATCGCCATGATCACCGCGTTATGCGGCGTCCGATCCCGATCCCGACGAAGCTCGCCGCCTTCCGAAGCTTCATCTAAAACCGCCGA
CAAGAAACAGGACATAAACGGTTCCCGAACGACAACCTCATCAACAGCGGGGACAACCCCAGTAGCTGGAGAATCAGGAAACGACGACGGCGAAACAGAGGAGTTGATGA
AAGAGCTTCCCCTGCCACCAAAAATGCAGCAGGTGGCGAGTCCGAGCCCGCCGAGCAAAATTGCAAAATCGGCATCGGAGAGAAGGCTGAAGCATATGACGAGCTTGAAC
ATGAAAGTTCCGAGGAGCCATTCGGTGGCGAGGAAGGATTTGGAGGAAGGAGGAGGGAGGAGAAAAGAGAAGATGATAGAGGAAGAATTGATATGGCAGAAGACGATAAT
ATTAGGGGAGAAATGCAGAGTTTCAGATGAAGAAGATGGTGTTATTTATGAAGGAAAAGGGAAGAGGATTTCGGCTTATCATCCGAGATCTCCGAGCTCGATGTCGATAT
CGATTTCTCGACAAAGTTCCGCCATTGATGCTGAAGCTCTGCCTGACCTAGGAGCAAAATAG
Protein sequenceShow/hide protein sequence
MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAGESGNDDGETEELMKELPLPPKMQQVASPSPPSKIAKSASERRLKHMTSLN
MKVPRSHSVARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDLGAK