; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23952 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23952
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:3948728..3949560
RNA-Seq ExpressionCarg23952
SyntenyCarg23952
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585750.1 hypothetical protein SDJN03_18483, partial [Cucurbita argyrosperma subsp. sororia]1.2e-70100Show/hide
Query:  MNHNQLRLIRSTVNWKPRGEFLLKRLEGTNQSRFLRSGEERSREGGPRRSRRGIRRFREERFPFRCGCRERFRFVFFTKLSTTNCDYYCLSPVSTPLNHE
        MNHNQLRLIRSTVNWKPRGEFLLKRLEGTNQSRFLRSGEERSREGGPRRSRRGIRRFREERFPFRCGCRERFRFVFFTKLSTTNCDYYCLSPVSTPLNHE
Subjt:  MNHNQLRLIRSTVNWKPRGEFLLKRLEGTNQSRFLRSGEERSREGGPRRSRRGIRRFREERFPFRCGCRERFRFVFFTKLSTTNCDYYCLSPVSTPLNHE

Query:  LSLIVPVDVSCRHSRRRSACEFAQILSGYSQAALSVC
        LSLIVPVDVSCRHSRRRSACEFAQILSGYSQAALSVC
Subjt:  LSLIVPVDVSCRHSRRRSACEFAQILSGYSQAALSVC
KGN62379.1 hypothetical protein Csa_018717 [Cucumis sativus]4.3e-1250Show/hide
Query:  KRLEGTNQSRFLRSGEERSREGGPRRSRRGIRRFREERFPFRCGCRERFRFVFFTKL-----STTNCDYYCLSPVSTPLNHELSLIVPVDVSCRHSRRRS
        KR+E TNQSRF R  EE    G       G+   ++   P  CG  ERF  ++   L      T  C     SPV+   NHELS IVPVDVSCR SRRR 
Subjt:  KRLEGTNQSRFLRSGEERSREGGPRRSRRGIRRFREERFPFRCGCRERFRFVFFTKL-----STTNCDYYCLSPVSTPLNHELSLIVPVDVSCRHSRRRS

Query:  ACEFAQILSGYSQAALSV
        ACEFA+IL+GYSQAALS+
Subjt:  ACEFAQILSGYSQAALSV
TrEMBL top hitse value%identityAlignment
A0A0A0LN05 Uncharacterized protein2.1e-1250Show/hide
Query:  KRLEGTNQSRFLRSGEERSREGGPRRSRRGIRRFREERFPFRCGCRERFRFVFFTKL-----STTNCDYYCLSPVSTPLNHELSLIVPVDVSCRHSRRRS
        KR+E TNQSRF R  EE    G       G+   ++   P  CG  ERF  ++   L      T  C     SPV+   NHELS IVPVDVSCR SRRR 
Subjt:  KRLEGTNQSRFLRSGEERSREGGPRRSRRGIRRFREERFPFRCGCRERFRFVFFTKL-----STTNCDYYCLSPVSTPLNHELSLIVPVDVSCRHSRRRS

Query:  ACEFAQILSGYSQAALSV
        ACEFA+IL+GYSQAALS+
Subjt:  ACEFAQILSGYSQAALSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCATAATCAGCTCCGTTTGATTCGGTCAACGGTGAACTGGAAGCCACGTGGAGAATTCTTATTGAAGCGCCTTGAAGGAACAAACCAATCCAGATTTCTGAGGAG
CGGAGAGGAGAGGAGTCGAGAGGGAGGCCCACGACGGAGTAGACGGGGGATCCGGCGGTTCCGCGAGGAAAGATTCCCTTTCCGTTGCGGTTGTCGAGAACGGTTTCGTT
TTGTCTTTTTCACTAAGCTTTCGACAACGAACTGCGATTACTACTGCCTTTCTCCCGTCTCCACTCCGTTAAATCACGAGCTGAGCCTCATTGTTCCTGTGGATGTATCT
TGTCGTCATTCAAGAAGAAGATCGGCTTGTGAATTTGCCCAAATCCTTTCTGGGTATTCTCAGGCCGCCTTGTCTGTCTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCATAATCAGCTCCGTTTGATTCGGTCAACGGTGAACTGGAAGCCACGTGGAGAATTCTTATTGAAGCGCCTTGAAGGAACAAACCAATCCAGATTTCTGAGGAG
CGGAGAGGAGAGGAGTCGAGAGGGAGGCCCACGACGGAGTAGACGGGGGATCCGGCGGTTCCGCGAGGAAAGATTCCCTTTCCGTTGCGGTTGTCGAGAACGGTTTCGTT
TTGTCTTTTTCACTAAGCTTTCGACAACGAACTGCGATTACTACTGCCTTTCTCCCGTCTCCACTCCGTTAAATCACGAGCTGAGCCTCATTGTTCCTGTGGATGTATCT
TGTCGTCATTCAAGAAGAAGATCGGCTTGTGAATTTGCCCAAATCCTTTCTGGGTATTCTCAGGCCGCCTTGTCTGTCTGTTAA
Protein sequenceShow/hide protein sequence
MNHNQLRLIRSTVNWKPRGEFLLKRLEGTNQSRFLRSGEERSREGGPRRSRRGIRRFREERFPFRCGCRERFRFVFFTKLSTTNCDYYCLSPVSTPLNHELSLIVPVDVS
CRHSRRRSACEFAQILSGYSQAALSVC