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Carg23955 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23955
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:3941115..3944917
RNA-Seq ExpressionCarg23955
SyntenyCarg23955
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020659.1 hypothetical protein SDJN02_17345, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-119100Show/hide
Query:  MVAVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSS
        MVAVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSS
Subjt:  MVAVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSS

Query:  VLTNLTGISKSTSSTTITHLENSLDGDQSPGRCYSPSRQEAGVLETAFLLQPHIQISSSTEYKNQLGIFNCVDGHSALLVDKLSILHNHQESQIWKVCSA
        VLTNLTGISKSTSSTTITHLENSLDGDQSPGRCYSPSRQEAGVLETAFLLQPHIQISSSTEYKNQLGIFNCVDGHSALLVDKLSILHNHQESQIWKVCSA
Subjt:  VLTNLTGISKSTSSTTITHLENSLDGDQSPGRCYSPSRQEAGVLETAFLLQPHIQISSSTEYKNQLGIFNCVDGHSALLVDKLSILHNHQESQIWKVCSA

Query:  WRRLLELQLPAIVEDE
        WRRLLELQLPAIVEDE
Subjt:  WRRLLELQLPAIVEDE

KAG8495447.1 hypothetical protein CXB51_013068 [Gossypium anomalum]6.8e-2045.14Show/hide
Query:  AVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSSVL
        A + TLGLG PMY S+G+  I  LGRGEGIGTE+PK+PGV LGD+ TCS A  C+S GYS T PI GP PL+HL  K     +N  + LL   + R SVL
Subjt:  AVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSSVL

Query:  TNLTGISKSTSSTTITHLENSL-DGDQSPGRCYSPSRQEAGVLE
         +      S++S     L+ +L D D    +   P  +E    E
Subjt:  TNLTGISKSTSSTTITHLENSL-DGDQSPGRCYSPSRQEAGVLE

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTGTCACAGGCACCCTTGGGCTCGGGATCCCCATGTATGAGAGTCTGGGAGACATCCTAATCTTCGGGCTAGGCCGAGGTGAAGGTATCGGAACAGAGCTGCC
GAAGAAACCCGGTGTGGGTCTTGGTGACAAGTTCACTTGCTCAAATGCTCGTGCTTGCAACTCTGCTGGGTACTCCTTCACACATCCAATTCTGGGGCCAACTCCACTGC
TCCATCTGCACAGCAAGCGCTTTGGTACATCTATCAATGGTGCCTCTATTCTGCTACCTGGGTTCTCTTGCCGCTCAAGTGTGCTAACCAACTTGACTGGTATTTCCAAA
TCGACATCCTCTACAACCATTACACACCTTGAGAACTCCCTCGACGGCGACCAATCGCCCGGCCGCTGTTATAGCCCCTCCAGACAGGAAGCTGGAGTGCTGGAAACGGC
CTTTCTTCTTCAGCCCCACATACAAATCTCTAGTAGTACTGAGTACAAAAATCAACTTGGAATCTTCAACTGTGTTGATGGGCACTCTGCTTTGCTTGTAGATAAGCTTT
CCATCCTCCACAACCACCAGGAAAGCCAGATATGGAAGGTTTGCAGTGCATGGCGGCGTCTGCTAGAGCTGCAGCTGCCAGCCATTGTTGAAGATGAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCTGTCACAGGCACCCTTGGGCTCGGGATCCCCATGTATGAGAGTCTGGGAGACATCCTAATCTTCGGGCTAGGCCGAGGTGAAGGTATCGGAACAGAGCTGCC
GAAGAAACCCGGTGTGGGTCTTGGTGACAAGTTCACTTGCTCAAATGCTCGTGCTTGCAACTCTGCTGGGTACTCCTTCACACATCCAATTCTGGGGCCAACTCCACTGC
TCCATCTGCACAGCAAGCGCTTTGGTACATCTATCAATGGTGCCTCTATTCTGCTACCTGGGTTCTCTTGCCGCTCAAGTGTGCTAACCAACTTGACTGGTATTTCCAAA
TCGACATCCTCTACAACCATTACACACCTTGAGAACTCCCTCGACGGCGACCAATCGCCCGGCCGCTGTTATAGCCCCTCCAGACAGGAAGCTGGAGTGCTGGAAACGGC
CTTTCTTCTTCAGCCCCACATACAAATCTCTAGTAGTACTGAGTACAAAAATCAACTTGGAATCTTCAACTGTGTTGATGGGCACTCTGCTTTGCTTGTAGATAAGCTTT
CCATCCTCCACAACCACCAGGAAAGCCAGATATGGAAGGTTTGCAGTGCATGGCGGCGTCTGCTAGAGCTGCAGCTGCCAGCCATTGTTGAAGATGAA
Protein sequenceShow/hide protein sequence
MVAVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSSVLTNLTGISK
STSSTTITHLENSLDGDQSPGRCYSPSRQEAGVLETAFLLQPHIQISSSTEYKNQLGIFNCVDGHSALLVDKLSILHNHQESQIWKVCSAWRRLLELQLPAIVEDE