; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23968 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23968
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionfar upstream element-binding protein 1-like
Genome locationCarg_Chr12:3870510..3874029
RNA-Seq ExpressionCarg23968
SyntenyCarg23968
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585737.1 Far upstream element-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.4e-16498.39Show/hide
Query:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
        MADEAQYSSGTD ASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
Subjt:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP

Query:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
        RVENGGGFDSYEKGFSSGSDLKSH+SNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
Subjt:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ

Query:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
        IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
Subjt:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL

Query:  VNEVTSEVRLQ
        VNEVTSE R++
Subjt:  VNEVTSEVRLQ

KAG7020646.1 Far upstream element-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-176100Show/hide
Query:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
        MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
Subjt:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP

Query:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
        RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
Subjt:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ

Query:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
        IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
Subjt:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL

Query:  VNEVTSEVRLQILVPLRLLCPFVVGTNA
        VNEVTSEVRLQILVPLRLLCPFVVGTNA
Subjt:  VNEVTSEVRLQILVPLRLLCPFVVGTNA

XP_022951945.1 far upstream element-binding protein 1-like isoform X1 [Cucurbita moschata]1.2e-16498.71Show/hide
Query:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
        MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
Subjt:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP

Query:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
        RVENGGGFDSYEKGFSSGSDLKSH+SNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
Subjt:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ

Query:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
        IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
Subjt:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL

Query:  VNEVTSEVRLQ
        VNEVTSE R++
Subjt:  VNEVTSEVRLQ

XP_022951946.1 far upstream element-binding protein 1-like isoform X2 [Cucurbita moschata]1.2e-16498.71Show/hide
Query:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
        MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
Subjt:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP

Query:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
        RVENGGGFDSYEKGFSSGSDLKSH+SNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
Subjt:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ

Query:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
        IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
Subjt:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL

Query:  VNEVTSEVRLQ
        VNEVTSE R++
Subjt:  VNEVTSEVRLQ

XP_023536823.1 far upstream element-binding protein 1-like [Cucurbita pepo subsp. pepo]9.9e-16498.07Show/hide
Query:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
        MADEAQYSSGTD ASNKRKYDDHPPPMVSRRPTGFSGPITSPSSD+ANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
Subjt:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP

Query:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
        RVENGGGFDSYEKGFSSGSDLKSH+SNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
Subjt:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ

Query:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
        IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
Subjt:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL

Query:  VNEVTSEVRLQ
        VNEVTSE R++
Subjt:  VNEVTSEVRLQ

TrEMBL top hitse value%identityAlignment
A0A6J1GIW7 far upstream element-binding protein 1-like isoform X25.6e-16598.71Show/hide
Query:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
        MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
Subjt:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP

Query:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
        RVENGGGFDSYEKGFSSGSDLKSH+SNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
Subjt:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ

Query:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
        IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
Subjt:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL

Query:  VNEVTSEVRLQ
        VNEVTSE R++
Subjt:  VNEVTSEVRLQ

A0A6J1GKB7 far upstream element-binding protein 1-like isoform X15.6e-16598.71Show/hide
Query:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
        MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
Subjt:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP

Query:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
        RVENGGGFDSYEKGFSSGSDLKSH+SNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
Subjt:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ

Query:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
        IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
Subjt:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL

Query:  VNEVTSEVRLQ
        VNEVTSE R++
Subjt:  VNEVTSEVRLQ

A0A6J1HCS4 far upstream element-binding protein 14.2e-15291Show/hide
Query:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
        MADEAQYSSGTD  SNKRKY+D PPPMV+RRPTGFSGPITSPSSD+A+PPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVG D KRP
Subjt:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP

Query:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
        RVENG GFDSY+KGFSSG+DLK H+S+SAPS+ PVSYGFQGTSKKI+IPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATR V+LMGT DQ
Subjt:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ

Query:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
        IAKAEQL+NDVLSEAESGGSGIVS+RLTG SGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
Subjt:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL

Query:  VNEVTSEVRLQ
        VNEV SE R++
Subjt:  VNEVTSEVRLQ

A0A6J1K9U8 far upstream element-binding protein 11.3e-15391.64Show/hide
Query:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
        MADEAQYSSGTD+ SNKRKY+D PPPMV+RRPTGFSGPITSPSSD A+PPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGAD KRP
Subjt:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP

Query:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
        RVENG GFDSY+KGFSSG+DLK H+S+SAPS+ PVSYGFQGTSKKI+IPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATR V+LMGTPDQ
Subjt:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ

Query:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
        IAKAEQL+NDVLSEAESGGSGIVS+RLTG SGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
Subjt:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL

Query:  VNEVTSEVRLQ
        VNEV SE R++
Subjt:  VNEVTSEVRLQ

A0A6J1KKK3 far upstream element-binding protein 1-like4.0e-16397.75Show/hide
Query:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
        MADEAQYSSGTD ASNKRKYDDHPPPMVSRRPTGFSGPITSPSSD+ANP PPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP
Subjt:  MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRP

Query:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
        RVENGGGFDSYEKGFSSGSDLKSH+SNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ
Subjt:  RVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQ

Query:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
        IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL
Subjt:  IAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQL

Query:  VNEVTSEVRLQ
        VNEVTSE R++
Subjt:  VNEVTSEVRLQ

SwissProt top hitse value%identityAlignment
Q3U0V1 Far upstream element-binding protein 24.3e-2129.96Show/hide
Query:  PPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRPRVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPN
        PP         D    A QRA++IA+++   +        P  G   ++ ++E+G   DS +K  S G  + S L    P            +++  +P+
Subjt:  PPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRPRVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPN

Query:  GRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIG
        G VG+IIG+GGE I  +Q  SG K+Q++ D    P    R+V L G P+ + KA+ +++D++S    G  G       G        + IP  K GLVIG
Subjt:  GRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIG

Query:  KGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVTSE
        KGGETIK +Q R G  +++I +     +T+ ++ L+I G   +++ A ++V ++  E
Subjt:  KGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVTSE

Q8UVD9 Far upstream element-binding protein 21.8e-1932.6Show/hide
Query:  SGGVGAGAGPGVGADAKR-PRVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRD
        SG VG   GP      +R P    GG   S       G        +  P +T V+  ++       +P+G VG+IIG+GGE I  +Q  SG K+Q++ D
Subjt:  SGGVGAGAGPGVGADAKR-PRVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRD

Query:  MDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTS
            P    R+V L G+P+ + KA+ +++D++S    G  G       G +G+ Q +M IP  K GLVIGKGGETIK +Q R G  +++I +     +T+
Subjt:  MDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTS

Query:  TERTLQIDGSSEQIESAKQLVNEVTSE
         ++ L+I G   +++ A ++V ++  E
Subjt:  TERTLQIDGSSEQIESAKQLVNEVTSE

Q91WJ8 Far upstream element-binding protein 13.1e-1930.26Show/hide
Query:  YNNVPPPM-------------DEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRPRVENGGGFDSYEKGFSSGS--DLKS--HLSNSAPSATPVS
        Y+ VPPP              D  + A QRA++IA++               +G DA      N  G+   ++    G   D K     ++S  +  P  
Subjt:  YNNVPPPM-------------DEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRPRVENGGGFDSYEKGFSSGS--DLKS--HLSNSAPSATPVS

Query:  YGFQGTS---KKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGS
        +  Q  S   ++  +P+G VG IIG+GGE I  +Q +SG KIQ+  D    P    R+  L GTP+ +  A++L++ ++   E G          G   +
Subjt:  YGFQGTS---KKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGS

Query:  EQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEV
         Q +M IP +K GLVIGKGGETIK +Q R G  ++++ +   P +T  ++ L+I G   +++ AK++V E+
Subjt:  EQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEV

Q92945 Far upstream element-binding protein 21.6e-2029.47Show/hide
Query:  PPMVSRRPTGFSGPITSPSSDTANPP--PPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRPRVENGGGFDSYEKGFSSGSDLK
        PP    R  G  G    P   +A  P  PP         D    A QRA++IA+++   +      + P  G   ++ ++E+G   +S +K  S G  + 
Subjt:  PPMVSRRPTGFSGPITSPSSDTANPP--PPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRPRVENGGGFDSYEKGFSSGSDLK

Query:  SHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGI
        S L    P            +++  +P+G VG+IIG+GGE I  +Q  SG K+Q++ D    P    R+V L G P+ + KA+ +++D++S    G  G 
Subjt:  SHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGI

Query:  VSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVTSE
              G        + IP  K GLVIGKGGETIK +Q R G  +++I +     +T+ ++ L+I G   +++ A ++V ++  E
Subjt:  VSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVTSE

Q99PF5 Far upstream element-binding protein 24.3e-2129.96Show/hide
Query:  PPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRPRVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPN
        PP         D    A QRA++IA+++   +        P  G   ++ ++E+G   DS +K  S G  + S L    P            +++  +P+
Subjt:  PPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRPRVENGGGFDSYEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPN

Query:  GRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIG
        G VG+IIG+GGE I  +Q  SG K+Q++ D    P    R+V L G P+ + KA+ +++D++S    G  G       G        + IP  K GLVIG
Subjt:  GRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIG

Query:  KGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVTSE
        KGGETIK +Q R G  +++I +     +T+ ++ L+I G   +++ A ++V ++  E
Subjt:  KGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVTSE

Arabidopsis top hitse value%identityAlignment
AT1G33680.1 KH domain-containing protein1.2e-3740.79Show/hide
Query:  IISSGGVGAGAGPGVGADAKRPRVENGGGFDSYEKGFSSGSDL--KSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQ
        +++   V  G+      D+++    N GG      G  S  ++  +S   N   +   V    Q T+++ID+P+ +VG +IGKGGE ++YLQ+ SGAKIQ
Subjt:  IISSGGVGAGAGPGVGADAKRPRVENGGGFDSYEKGFSSGSDL--KSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQ

Query:  VTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPP
        + RD +ADP+SA R V+++GT   I KAE+LIN V++E E+GG   ++ R       EQ  +K+P++KVG++IG+GGETIK+MQ ++ ARIQ+IP +   
Subjt:  VTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPP

Query:  GDTSTERTLQIDGSSEQIESAKQLVNEV
        GD S ERT++I G   QI+ A  L+ +V
Subjt:  GDTSTERTLQIDGSSEQIESAKQLVNEV

AT2G25970.1 KH domain-containing protein1.9e-10468.77Show/hide
Query:  MADEAQYSSGTDVASNKRKYDD-HPPPMVSRRPTGF-SGPITSPSSDTANP---PPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGA
        MADE+QYSS  D  SNKRKY++   PP  +RRPTGF SGPI S S D   P   PP SYN+VPPPMDEIQ+AKQ+AQEIA+RL+ S             A
Subjt:  MADEAQYSSGTDVASNKRKYDD-HPPPMVSRRPTGF-SGPITSPSSDTANP---PPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGA

Query:  DAKRPRVENGGGFD-SYEKGFSSGSDLKSHLSNSAPSATPVSYG-FQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVD
        DAKRPRV+NG  +D    KGFSS       +S + PS+ PVSYG FQGT+KKIDIPN RVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPN ATRTVD
Subjt:  DAKRPRVENGGGFD-SYEKGFSSGSDLKSHLSNSAPSATPVSYG-FQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVD

Query:  LMGTPDQIAKAEQLINDVLSEAESGGS----GIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDG
        L GTPDQI+KAEQLI DVL EAE+G +    G   +R+ G +G++QFVMKIPNNKVGL+IGKGGETIKSMQA+TGARIQVIPLHLPPGD + ERTLQIDG
Subjt:  LMGTPDQIAKAEQLINDVLSEAESGGS----GIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDG

Query:  SSEQIESAKQLVNEVTS
         +EQIE AKQLVNE+ S
Subjt:  SSEQIESAKQLVNEVTS

AT4G10070.1 KH domain-containing protein3.0e-4150.57Show/hide
Query:  GFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGS----
        G Q T+++ID+P+ +VGV+IGKGGETI+YLQ  SGAKIQ+ RD +ADP+SA R V+++G+   I  AE+LI+ V++EAE+GGS  +  R   S+ +    
Subjt:  GFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSGS----

Query:  EQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVTSE
        EQ  +K+PN+KVGL+IG+GGETIK+MQ R+GAR Q+IP H   GD   ERT++I G   QI+ A  ++ +V ++
Subjt:  EQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVTSE

AT5G04430.1 binding to TOMV RNA 1L (long form)3.8e-1234.13Show/hide
Query:  IPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVL-SEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVG
        + N   G +IGKGG TI   Q +SGA+IQ++R+ +  P +  R + + G+  ++    +LI D L SE  +     V  R        +  + +PN+  G
Subjt:  IPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVL-SEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVG

Query:  LVIGKGGETIKSMQARTGARIQVIPL
         +IGKGG TIKS    + A I++ PL
Subjt:  LVIGKGGETIKSMQARTGARIQVIPL

AT5G04430.2 binding to TOMV RNA 1L (long form)3.8e-1234.13Show/hide
Query:  IPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVL-SEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVG
        + N   G +IGKGG TI   Q +SGA+IQ++R+ +  P +  R + + G+  ++    +LI D L SE  +     V  R        +  + +PN+  G
Subjt:  IPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVL-SEAESGGSGIVSQRLTGSSGSEQFVMKIPNNKVG

Query:  LVIGKGGETIKSMQARTGARIQVIPL
         +IGKGG TIKS    + A I++ PL
Subjt:  LVIGKGGETIKSMQARTGARIQVIPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACGAAGCGCAGTATTCATCTGGTACTGATGTTGCGTCCAATAAGCGCAAGTACGATGACCATCCTCCACCTATGGTTTCCCGCCGGCCGACTGGTTTTTCCGG
CCCCATCACTTCCCCCTCCTCCGATACGGCCAATCCTCCGCCTCCCTCCTACAACAACGTCCCGCCCCCTATGGATGAGATCCAGCTTGCTAAGCAGCGTGCTCAGGAAA
TTGCCTCTCGGTTGATTATCTCCAGTGGTGGCGTCGGGGCCGGCGCTGGACCTGGCGTTGGGGCTGATGCCAAGCGCCCAAGGGTTGAGAATGGCGGCGGGTTTGATTCA
TACGAAAAGGGTTTTAGTTCTGGCTCAGACTTAAAGTCTCACTTGTCTAATTCAGCTCCTTCAGCAACACCTGTTTCCTATGGGTTTCAAGGGACAAGCAAGAAAATCGA
CATTCCAAATGGTAGAGTGGGTGTAATTATTGGTAAAGGTGGTGAGACCATCAAGTACCTTCAGCTCCAGTCTGGGGCAAAAATACAAGTTACTCGTGACATGGATGCAG
ATCCCAATTCTGCTACCCGGACGGTTGATCTAATGGGTACTCCTGATCAAATTGCTAAGGCCGAGCAGTTGATTAATGATGTTCTTTCCGAGGCTGAATCTGGAGGTTCT
GGCATAGTATCTCAAAGATTGACTGGTTCATCGGGATCTGAGCAGTTTGTTATGAAAATTCCCAATAATAAGGTTGGCTTGGTTATTGGTAAAGGTGGTGAAACAATCAA
AAGTATGCAAGCCAGGACTGGAGCTCGTATTCAGGTGATACCTTTGCACTTACCCCCTGGGGATACATCTACAGAAAGAACCTTACAGATTGATGGTTCAAGCGAACAGA
TTGAGTCAGCAAAACAGTTGGTTAATGAAGTTACCAGTGAGGTGCGTTTGCAGATTTTGGTTCCATTAAGATTGTTATGCCCTTTTGTAGTAGGAACTAATGCATAG
mRNA sequenceShow/hide mRNA sequence
AAGAAGAAAACCCATCCTCTTTATCACCTCTCGTTTTCTCTTTCTAGGGTTTTCTCTCTGAAGCTAAACAATGGCTGACGAAGCGCAGTATTCATCTGGTACTGATGTTG
CGTCCAATAAGCGCAAGTACGATGACCATCCTCCACCTATGGTTTCCCGCCGGCCGACTGGTTTTTCCGGCCCCATCACTTCCCCCTCCTCCGATACGGCCAATCCTCCG
CCTCCCTCCTACAACAACGTCCCGCCCCCTATGGATGAGATCCAGCTTGCTAAGCAGCGTGCTCAGGAAATTGCCTCTCGGTTGATTATCTCCAGTGGTGGCGTCGGGGC
CGGCGCTGGACCTGGCGTTGGGGCTGATGCCAAGCGCCCAAGGGTTGAGAATGGCGGCGGGTTTGATTCATACGAAAAGGGTTTTAGTTCTGGCTCAGACTTAAAGTCTC
ACTTGTCTAATTCAGCTCCTTCAGCAACACCTGTTTCCTATGGGTTTCAAGGGACAAGCAAGAAAATCGACATTCCAAATGGTAGAGTGGGTGTAATTATTGGTAAAGGT
GGTGAGACCATCAAGTACCTTCAGCTCCAGTCTGGGGCAAAAATACAAGTTACTCGTGACATGGATGCAGATCCCAATTCTGCTACCCGGACGGTTGATCTAATGGGTAC
TCCTGATCAAATTGCTAAGGCCGAGCAGTTGATTAATGATGTTCTTTCCGAGGCTGAATCTGGAGGTTCTGGCATAGTATCTCAAAGATTGACTGGTTCATCGGGATCTG
AGCAGTTTGTTATGAAAATTCCCAATAATAAGGTTGGCTTGGTTATTGGTAAAGGTGGTGAAACAATCAAAAGTATGCAAGCCAGGACTGGAGCTCGTATTCAGGTGATA
CCTTTGCACTTACCCCCTGGGGATACATCTACAGAAAGAACCTTACAGATTGATGGTTCAAGCGAACAGATTGAGTCAGCAAAACAGTTGGTTAATGAAGTTACCAGTGA
GGTGCGTTTGCAGATTTTGGTTCCATTAAGATTGTTATGCCCTTTTGTAGTAGGAACTAATGCATAGTTGAAATCTAATTCCATGAATTTTTTGTGTGAATTTTTTATTT
TTGAGGTGTTTGTAATGATTTTTCCTGATTGTACTTGGTTATTTTTGTAATTGTTGATGCAAGGTTGCCATACTATTCTAGAACTCCTTTAGCTCTTTCTATGAATTCTT
TTAGTATTTAGTGTTATACCTCAACACCAAGGTGAGCATTAAGGACTCAGTGTTGATGGACGTTGAATTGTTTCATTGCTTTTACATGTTTATTCAGCTTCTTACTGTGA
TATAGCTGGGATTTGGTATTCATTTACTTCATATAGATTACACTGTTTTGTGAAGATTATGAAATGTTCTGTTTTCTGATTGTGTTCCTTATTATAAATTGAAATGTTTT
CTTTTTAAGACACATTCTTGTTACAGTCACGTTTTTTATTTGTTATAATTTTGTACACTAATCATTCTTCAATACAATGCTTCTGTTTTTCTTTCTGGAAGGAAATAGTT
GATACTTCTCTCATTGTCTCTATGTTGTCTTGTTGGATAGCTGGAGTCAACAAGAATTTGGTTTCTTCGTCGTTCATTGAAAATACTTCTTTTCCCTTCTAAAGTTTACC
CTGCTTAATGAACTGGAGCTTCTATGAAATTTGTCAAACACTGTTATATACTCAGCATTTGGATATGTTGTTCATTTGACTATAATGAATATGTTTCTGTGTTGCAAATC
TGAAAAATCATTTTATTGCCGATGCTGTTAGTATGCCCGAGCAGTTTTACTATTTTAATTGTCTTAAACAGTAACTATTGAAGAGCCGTAAGGAGGTTTGTTCCCTCACT
ATGCTTACTTTCAACTTTGGGGTGAGCTCTGTTTGGATTGTATGTCGACCGTATCAATGCTGGTTTGTAGTTACACTCAAGGAATTAGAAGCATTGGAATATACAAACCT
GTTATTACTTTTGGATCTCTTATAGCTTGAGATAGCTTTTAGGTCTTTTATCCATAATCGATCTGGATTTCTTATTATGTCTGCAATTGTTTATTCTACATATCCATTGA
TGCAGATATGGAGGATCTAAGGTTCCTGGGGTTTGGAAATAGGTGAAGTTATTTTTACAGATGGAACACCTAGTTAGTTTTTGAAGAGTGACTGGTACTTGAAGGGTTCC
CATTGGTGATATGTTTGCTCCGTTGGATATTCAGTTTATCTGTCAATATTACTCTTATTAGGTTGTTAAGGTTATATGATCTCTCTCCTATTTAAGATGTCTGCAGCCGG
TTCGGTATTATTCTTGGTTTTATATCTTGATTGTGGTATCTGAAAGGTTCCCATTGGTGATATGCTGGCTCCTTTGGATATTCAGTTTATCAGTCAATATTACTCTTATT
AGGTTGTTAAGGTTACATGATATCTCTCCTATTTAAGATGTCTGCAACCCATTTGGTATTATTCTTGGTTTTATATCCTGATTGTGGTATCCGTAAGGTTCCCATTGGTG
ATATGCT
Protein sequenceShow/hide protein sequence
MADEAQYSSGTDVASNKRKYDDHPPPMVSRRPTGFSGPITSPSSDTANPPPPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADAKRPRVENGGGFDS
YEKGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGS
GIVSQRLTGSSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVTSEVRLQILVPLRLLCPFVVGTNA