; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23979 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23979
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger CCCH domain-containing protein 20-like
Genome locationCarg_Chr12:3813502..3814350
RNA-Seq ExpressionCarg23979
SyntenyCarg23979
Gene Ontology termsGO:0061157 - mRNA destabilization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585728.1 Zinc finger CCCH domain-containing protein 20, partial [Cucurbita argyrosperma subsp. sororia]3.9e-15398.18Show/hide
Query:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH
        HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH
Subjt:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH

Query:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK
        GTFE WLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK
Subjt:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK

Query:  SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVD----RIRPLISAGSQS
        SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVD    RIRPLISAGSQS
Subjt:  SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVD----RIRPLISAGSQS

KAG7020635.1 Zinc finger CCCH domain-containing protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-163100Show/hide
Query:  MSIVKRYAPPSPHVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHG
        MSIVKRYAPPSPHVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHG
Subjt:  MSIVKRYAPPSPHVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHG

Query:  CCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSR
        CCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSR
Subjt:  CCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSR

Query:  LVPLMHNLQLDKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
        LVPLMHNLQLDKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
Subjt:  LVPLMHNLQLDKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS

XP_022951066.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata]1.0e-15398.52Show/hide
Query:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH
        HVSPLDSPTRAVMEFDSSFWEEQ+LPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKF+YSGTECPALRHGCCKKGDACEFAH
Subjt:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH

Query:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK
        GTFE WLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIA+AVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK
Subjt:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK

Query:  SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
        SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
Subjt:  SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS

XP_023002826.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima]6.3e-15197.06Show/hide
Query:  SPHVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEF
        S HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAH GEKARRRDPRKF+YSGTECPALRHGCCKKGDACEF
Subjt:  SPHVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEF

Query:  AHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQL
        AHGTFE WLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRA KEI AAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQL
Subjt:  AHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQL

Query:  DKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
        DKSKK PAVSGF SSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
Subjt:  DKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS

XP_023537964.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo]9.7e-15297.41Show/hide
Query:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH
        HVSPLDSPTRAVMEFDSSFWEEQD+PAAVDAFTCDDFRMYEFKVRSC RGRSHDWTKCP AH GEKARRRDPRKF+YSGTECPALRHGCC KGDACEFAH
Subjt:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH

Query:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK
        GTFE WLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK
Subjt:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK

Query:  SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
        SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
Subjt:  SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS

TrEMBL top hitse value%identityAlignment
A0A1S3BBA7 LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 202.2e-12580.51Show/hide
Query:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH
        HVSPLDSPT A+M+FDSS WE+ DLPA VD F+CD FRMYEFKVRSCARGRSHDWTKCPYAH GEKARRRDPRKF+YSG ECP LRHGCCKKGDACE+AH
Subjt:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH

Query:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISP--DSPPMSPISPVTTGGESFSRLVPLMHNLQL
        GTFE WLHPDRYRTQPCRDG  CRRRVCFFAHT EQLRIP KQS+ SPRA +    AV+SPTSIL+SP  DSPP+SPISPV +GGES SRLV LMH+L+L
Subjt:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISP--DSPPMSPISPVTTGGESFSRLVPLMHNLQL

Query:  DKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
        D+ K NP VS F  + RRNSG FDLWDR  EEEPAMERVESGRNLRAQMYAKLMRENSVDR+RPLISAGSQ+
Subjt:  DKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS

A0A5A7V5C0 Zinc finger CCCH domain-containing protein 203.4e-12680.88Show/hide
Query:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH
        HVSPLDSPT A+M+FDSS WE+ DLPA VD F+CD FRMYEFKVRSCARGRSHDWTKCPYAH GEKARRRDPRKF+YSG ECP LRHGCCKKGDACE+AH
Subjt:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH

Query:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISP--DSPPMSPISPVTTGGESFSRLVPLMHNLQL
        GTFE WLHPDRYRTQPCRDG  CRRRVCFFAHT EQLRIP KQS+ SPRA +    AV+SPTSIL+SP  DSPP+SPISPV +GGESFSRLV LMH+L+L
Subjt:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISP--DSPPMSPISPVTTGGESFSRLVPLMHNLQL

Query:  DKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
        D+ K NP VS F  + RRNSG FDLWDR  EEEPAMERVESGRNLRAQMYAKLMRENSVDR+RPLISAGSQ+
Subjt:  DKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS

A0A6J1GGI4 zinc finger CCCH domain-containing protein 20-like5.0e-15498.52Show/hide
Query:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH
        HVSPLDSPTRAVMEFDSSFWEEQ+LPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKF+YSGTECPALRHGCCKKGDACEFAH
Subjt:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH

Query:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK
        GTFE WLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIA+AVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK
Subjt:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDK

Query:  SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
        SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
Subjt:  SKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS

A0A6J1K790 zinc finger CCCH domain-containing protein 20-like4.2e-12479.78Show/hide
Query:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH
        +VSPLDSPT AVM++DSSFWE+QDLPA VDAFTCD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKF+YSGTECP LRHGCC KGDACE+AH
Subjt:  HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH

Query:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILI--SPDSPPMSPISPVTTGGESFSRLVPLMHNLQL
        G FE WLHPDRYRTQPCRDG  CRRRVCFFAH+ EQLRIP KQS+ SPR  +  A AV+SPTSILI  S DSPPMSPISP+ TGGESFSRLV LMHNL  
Subjt:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILI--SPDSPPMSPISPVTTGGESFSRLVPLMHNLQL

Query:  DKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
        D+ K NP +SGF  S RRNSG FD WDR  EEEPAMERVESGRNLRAQMYAKLMR+NSV+R+RPLI AGS++
Subjt:  DKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS

A0A6J1KMD9 zinc finger CCCH domain-containing protein 20-like3.1e-15197.06Show/hide
Query:  SPHVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEF
        S HVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAH GEKARRRDPRKF+YSGTECPALRHGCCKKGDACEF
Subjt:  SPHVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEF

Query:  AHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQL
        AHGTFE WLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRA KEI AAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQL
Subjt:  AHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQL

Query:  DKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
        DKSKK PAVSGF SSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS
Subjt:  DKSKKNPAVSGFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS

SwissProt top hitse value%identityAlignment
O82199 Zinc finger CCCH domain-containing protein 201.8e-6851.3Show/hide
Query:  VDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVC
        +DA+TCD FRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPRKF YSGT CP  R GCCK+GDACEF+HG FE WLHP RYRTQPC+DG  CRRRVC
Subjt:  VDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVC

Query:  FFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISP--DSPPMSPISPVTTGGESFSR---------LVPLMHNLQLDKSKK------NPAVSGFD
        FFAH+ +Q+R+   QS     +   ++  +       ISP  +SPP+SP     +     SR         +V  + NLQL+K K       N  + G+ 
Subjt:  FFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISP--DSPPMSPISPVTTGGESFSR---------LVPLMHNLQLDKSKK------NPAVSGFD

Query:  S---SPR---------------RNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRP
        S   SPR                  G  ++W+   EEEPAMERVESGR LRAQ++ KL +EN + RI P
Subjt:  S---SPR---------------RNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRP

O82307 Zinc finger CCCH domain-containing protein 236.7e-6349.45Show/hide
Query:  PSPHVSPLDSPTRAV----MEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKG
        PSP++    S  R +    +  DS      +     D+F+ D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF YSGT CP  R G C++G
Subjt:  PSPHVSPLDSPTRAV----MEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKG

Query:  DACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLM
        D+CEF+HG FE WLHP RYRTQPC+DG +CRRR+CFFAHT EQLR+      + P      +   TSPTSIL+SP   P S   P++    S   L+  M
Subjt:  DACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLM

Query:  HNLQLDK---SKKNPAVSG----FDSSPRRNSGGFDLWDR----TFEEEPAMERVESGRNLRAQMYAKLMRENSV
          +QL+    S  +P  S     F SS R        W R      EE PAME VESG+ LRA+MYA+L RENS+
Subjt:  HNLQLDK---SKKNPAVSG----FDSSPRRNSGGFDLWDR----TFEEEPAMERVESGRNLRAQMYAKLMRENSV

Q6L4N4 Zinc finger CCCH domain-containing protein 351.2e-5642.12Show/hide
Query:  EEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDG
        E   + AAVDA+ CD+FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPR++ YSGT CP  R G CK+GDACEFAHG FE WLHP RYRTQPC+DG
Subjt:  EEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDG

Query:  IACRRRVCFFAHTLEQLRI---PAKQSLMSPR---------AAKEIAAAV--------------------TSPTSILISPDSPPMS---PISPVTTG---
         ACRRRVCFFAHT +QLR+     +Q   SPR         AA  +A +                     +SPTS L+SP   P S   P+SP   G   
Subjt:  IACRRRVCFFAHTLEQLRI---PAKQSLMSPR---------AAKEIAAAV--------------------TSPTSILISPDSPPMS---PISPVTTG---

Query:  -------GESFSRLVPLMHNLQLDKSKKNPAVSGF------------------------DSSPRRNS--------------GGFDLWDRTFEEEPAMERV
               G   + +   +  L+L   +  P+ + F                         S+P R S                 DL     EEE  MERV
Subjt:  -------GESFSRLVPLMHNLQLDKSKKNPAVSGF------------------------DSSPRRNS--------------GGFDLWDRTFEEEPAMERV

Query:  ESGRNLRAQMYAKLMRENSVDRIRPLISAG
        ESGR LR +++ +L +E +V       +AG
Subjt:  ESGRNLRAQMYAKLMRENSVDRIRPLISAG

Q9FU27 Zinc finger CCCH domain-containing protein 21.0e-5843.89Show/hide
Query:  EEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDG
        E   + AAVDA+ CD+FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPRK+ YSGT CP  R G CK+GDACE+AHG FE WLHP RYRTQPC+DG
Subjt:  EEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDG

Query:  IACRRRVCFFAHTLEQLRI-PAKQSLMSPRAAKEIAAAV--------------------TSPTSILISP------DSPPMSP--ISPVTTG-----GESF
         ACRRRVCFFAHT +QLR+ PA+QS     A+  +A +                     +SPTS L+SP      +SPP+SP   + +  G     G   
Subjt:  IACRRRVCFFAHTLEQLRI-PAKQSLMSPRAAKEIAAAV--------------------TSPTSILISP------DSPPMSP--ISPVTTG-----GESF

Query:  SRLVPLMHNLQLDKSKKN-------PAVSGFDSSPRRNSGGFDLWDRTF-------------------------EEEPAMERVESGRNLRAQMYAKLMRE
        + ++     L+L+K K +       P+ S    SP+  +G + L                              +EEP ++RVESGR LR +++ +L R+
Subjt:  SRLVPLMHNLQLDKSKKN-------PAVSGFDSSPRRNSGGFDLWDRTF-------------------------EEEPAMERVESGRNLRAQMYAKLMRE

Query:  NSV
         ++
Subjt:  NSV

Q9M0G2 Zinc finger CCCH domain-containing protein 491.1e-6250.19Show/hide
Query:  VDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVC
        +DA++CD FRMY+FKVR CARGRSHDWT+CPYAH GEKARRRDPRK+ YSGT CP  R G CKKGD+CEFAHG FE WLHP RYRTQPC+DG  C R++C
Subjt:  VDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVC

Query:  FFAHTLEQLRIPAKQS--------LMSPRAAKEIAAAVTSPTSILISPDSPPMSP-----ISPVT------TGGESFSRLVPLMHNLQLDKSKKNPAVS-
        FFAH+ +QLR    +S        + SP  A+    ++ SP S      SPPMSP      SP+T       G  S + +VP   NLQ +  K  P  + 
Subjt:  FFAHTLEQLRIPAKQS--------LMSPRAAKEIAAAVTSPTSILISPDSPPMSP-----ISPVT------TGGESFSRLVPLMHNLQLDKSKKNPAVS-

Query:  --------------GFDSSPR--RNSGGFDLWDRTFEEEPAMER-VESGRNLRAQMYAKLMRENSVDRI
                      GF S P      G  D+W+   EEEP MER VESGR LR +M  KL +EN +DR+
Subjt:  --------------GFDSSPR--RNSGGFDLWDRTFEEEPAMER-VESGRNLRAQMYAKLMRENSVDRI

Arabidopsis top hitse value%identityAlignment
AT2G19810.1 CCCH-type zinc finger family protein1.3e-6951.3Show/hide
Query:  VDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVC
        +DA+TCD FRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPRKF YSGT CP  R GCCK+GDACEF+HG FE WLHP RYRTQPC+DG  CRRRVC
Subjt:  VDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVC

Query:  FFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISP--DSPPMSPISPVTTGGESFSR---------LVPLMHNLQLDKSKK------NPAVSGFD
        FFAH+ +Q+R+   QS     +   ++  +       ISP  +SPP+SP     +     SR         +V  + NLQL+K K       N  + G+ 
Subjt:  FFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISP--DSPPMSPISPVTTGGESFSR---------LVPLMHNLQLDKSKK------NPAVSGFD

Query:  S---SPR---------------RNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRP
        S   SPR                  G  ++W+   EEEPAMERVESGR LRAQ++ KL +EN + RI P
Subjt:  S---SPR---------------RNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRP

AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein4.8e-6449.45Show/hide
Query:  PSPHVSPLDSPTRAV----MEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKG
        PSP++    S  R +    +  DS      +     D+F+ D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF YSGT CP  R G C++G
Subjt:  PSPHVSPLDSPTRAV----MEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKG

Query:  DACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLM
        D+CEF+HG FE WLHP RYRTQPC+DG +CRRR+CFFAHT EQLR+      + P      +   TSPTSIL+SP   P S   P++    S   L+  M
Subjt:  DACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLM

Query:  HNLQLDK---SKKNPAVSG----FDSSPRRNSGGFDLWDR----TFEEEPAMERVESGRNLRAQMYAKLMRENSV
          +QL+    S  +P  S     F SS R        W R      EE PAME VESG+ LRA+MYA+L RENS+
Subjt:  HNLQLDK---SKKNPAVSG----FDSSPRRNSGGFDLWDR----TFEEEPAMERVESGRNLRAQMYAKLMRENSV

AT2G25900.2 Zinc finger C-x8-C-x5-C-x3-H type family protein4.8e-6449.45Show/hide
Query:  PSPHVSPLDSPTRAV----MEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKG
        PSP++    S  R +    +  DS      +     D+F+ D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF YSGT CP  R G C++G
Subjt:  PSPHVSPLDSPTRAV----MEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKG

Query:  DACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLM
        D+CEF+HG FE WLHP RYRTQPC+DG +CRRR+CFFAHT EQLR+      + P      +   TSPTSIL+SP   P S   P++    S   L+  M
Subjt:  DACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLM

Query:  HNLQLDK---SKKNPAVSG----FDSSPRRNSGGFDLWDR----TFEEEPAMERVESGRNLRAQMYAKLMRENSV
          +QL+    S  +P  S     F SS R        W R      EE PAME VESG+ LRA+MYA+L RENS+
Subjt:  HNLQLDK---SKKNPAVSG----FDSSPRRNSGGFDLWDR----TFEEEPAMERVESGRNLRAQMYAKLMRENSV

AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain3.4e-4645.95Show/hide
Query:  SPLDSPTR-AVMEFDSSFWEEQDLPAAVDA-FTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH
        SPL SP +    EF   +  +  LP   ++ +  D+FRMY FKVR C+R  SHDWT+CP+ H GE ARRRDPRKF YS   CP  R G C++GD CE+AH
Subjt:  SPLDSPTR-AVMEFDSSFWEEQDLPAAVDA-FTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAH

Query:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLR---IPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPP----MSPISPVTTG-GESFSRL---
        G FE WLHP +YRT+ C+DG  C RRVCFFAHT E+LR        ++ SPR+  + AAA++      + P SP     MSP+SP   G G S S +   
Subjt:  GTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLR---IPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPP----MSPISPVTTG-GESFSRL---

Query:  ---VPLMH----NLQLDKSKKN
           VP +H    NLQ  + + +
Subjt:  ---VPLMH----NLQLDKSKKN

AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein8.1e-6450.19Show/hide
Query:  VDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVC
        +DA++CD FRMY+FKVR CARGRSHDWT+CPYAH GEKARRRDPRK+ YSGT CP  R G CKKGD+CEFAHG FE WLHP RYRTQPC+DG  C R++C
Subjt:  VDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEFAHGTFESWLHPDRYRTQPCRDGIACRRRVC

Query:  FFAHTLEQLRIPAKQS--------LMSPRAAKEIAAAVTSPTSILISPDSPPMSP-----ISPVT------TGGESFSRLVPLMHNLQLDKSKKNPAVS-
        FFAH+ +QLR    +S        + SP  A+    ++ SP S      SPPMSP      SP+T       G  S + +VP   NLQ +  K  P  + 
Subjt:  FFAHTLEQLRIPAKQS--------LMSPRAAKEIAAAVTSPTSILISPDSPPMSP-----ISPVT------TGGESFSRLVPLMHNLQLDKSKKNPAVS-

Query:  --------------GFDSSPR--RNSGGFDLWDRTFEEEPAMER-VESGRNLRAQMYAKLMRENSVDRI
                      GF S P      G  D+W+   EEEP MER VESGR LR +M  KL +EN +DR+
Subjt:  --------------GFDSSPR--RNSGGFDLWDRTFEEEPAMER-VESGRNLRAQMYAKLMRENSVDRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATCGTGAAACGATATGCCCCACCGTCGCCGCACGTGTCGCCGCTCGATTCGCCCACGAGAGCGGTCATGGAGTTCGATTCGTCATTCTGGGAGGAACAGGATCT
GCCGGCGGCGGTGGACGCGTTCACCTGCGACGATTTTCGTATGTACGAGTTCAAAGTTCGCTCGTGCGCACGTGGGAGGTCCCACGATTGGACTAAATGTCCGTACGCTC
ACGTCGGCGAGAAGGCTCGCCGCCGTGATCCGAGGAAGTTCAGCTATTCTGGCACTGAATGCCCTGCTTTACGCCATGGGTGTTGTAAGAAAGGGGACGCCTGTGAGTTC
GCTCATGGTACATTCGAAAGTTGGCTCCACCCAGACCGGTACCGGACTCAGCCGTGCCGTGACGGAATCGCCTGCCGGCGGCGAGTCTGTTTCTTCGCCCATACGTTGGA
GCAACTCCGGATTCCGGCGAAACAGAGCCTCATGTCTCCACGGGCGGCTAAGGAAATCGCCGCTGCTGTAACATCGCCGACGTCGATCCTAATCTCGCCGGATTCGCCTC
CAATGTCTCCGATCAGCCCTGTAACCACCGGCGGCGAATCGTTCAGCAGATTAGTCCCACTGATGCACAATCTCCAGCTTGACAAATCAAAGAAAAATCCAGCCGTCTCC
GGCTTCGATTCAAGCCCCCGGCGGAACTCCGGCGGGTTCGATCTGTGGGACAGAACTTTCGAAGAAGAACCGGCAATGGAGAGAGTGGAATCTGGAAGAAACCTCCGTGC
CCAAATGTACGCCAAATTAATGAGAGAGAATTCGGTGGACAGAATCCGGCCACTGATATCGGCCGGATCTCAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATCGTGAAACGATATGCCCCACCGTCGCCGCACGTGTCGCCGCTCGATTCGCCCACGAGAGCGGTCATGGAGTTCGATTCGTCATTCTGGGAGGAACAGGATCT
GCCGGCGGCGGTGGACGCGTTCACCTGCGACGATTTTCGTATGTACGAGTTCAAAGTTCGCTCGTGCGCACGTGGGAGGTCCCACGATTGGACTAAATGTCCGTACGCTC
ACGTCGGCGAGAAGGCTCGCCGCCGTGATCCGAGGAAGTTCAGCTATTCTGGCACTGAATGCCCTGCTTTACGCCATGGGTGTTGTAAGAAAGGGGACGCCTGTGAGTTC
GCTCATGGTACATTCGAAAGTTGGCTCCACCCAGACCGGTACCGGACTCAGCCGTGCCGTGACGGAATCGCCTGCCGGCGGCGAGTCTGTTTCTTCGCCCATACGTTGGA
GCAACTCCGGATTCCGGCGAAACAGAGCCTCATGTCTCCACGGGCGGCTAAGGAAATCGCCGCTGCTGTAACATCGCCGACGTCGATCCTAATCTCGCCGGATTCGCCTC
CAATGTCTCCGATCAGCCCTGTAACCACCGGCGGCGAATCGTTCAGCAGATTAGTCCCACTGATGCACAATCTCCAGCTTGACAAATCAAAGAAAAATCCAGCCGTCTCC
GGCTTCGATTCAAGCCCCCGGCGGAACTCCGGCGGGTTCGATCTGTGGGACAGAACTTTCGAAGAAGAACCGGCAATGGAGAGAGTGGAATCTGGAAGAAACCTCCGTGC
CCAAATGTACGCCAAATTAATGAGAGAGAATTCGGTGGACAGAATCCGGCCACTGATATCGGCCGGATCTCAAAGCTAA
Protein sequenceShow/hide protein sequence
MSIVKRYAPPSPHVSPLDSPTRAVMEFDSSFWEEQDLPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFSYSGTECPALRHGCCKKGDACEF
AHGTFESWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQLRIPAKQSLMSPRAAKEIAAAVTSPTSILISPDSPPMSPISPVTTGGESFSRLVPLMHNLQLDKSKKNPAVS
GFDSSPRRNSGGFDLWDRTFEEEPAMERVESGRNLRAQMYAKLMRENSVDRIRPLISAGSQS