; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23980 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23980
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhomeobox protein knotted-1-like 2
Genome locationCarg_Chr12:3802660..3805214
RNA-Seq ExpressionCarg23980
SyntenyCarg23980
Gene Ontology termsGO:0001708 - cell fate specification (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0010051 - xylem and phloem pattern formation (biological process)
GO:0010089 - xylem development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0042802 - identical protein binding (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR005539 - ELK domain
IPR005540 - KNOX1
IPR005541 - KNOX2
IPR008422 - Homeobox KN domain
IPR009057 - Homeobox-like domain superfamily
IPR017970 - Homeobox, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585727.1 hypothetical protein SDJN03_18460, partial [Cucurbita argyrosperma subsp. sororia]1.4e-172100Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
        EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
Subjt:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL

Query:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
        KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
Subjt:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD

Query:  AHYRLGP
        AHYRLGP
Subjt:  AHYRLGP

XP_022951002.1 homeobox protein knotted-1-like 2 [Cucurbita moschata]1.0e-17098.7Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKD D+MKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
        EGYY MLVKYREELTKPIQEA+DFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
Subjt:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL

Query:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
        KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
Subjt:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD

Query:  AHYRLGP
        AHYRLGP
Subjt:  AHYRLGP

XP_023002602.1 homeotic protein knotted-1-like isoform X1 [Cucurbita maxima]1.3e-15794.82Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHY HHQ+Q QQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAP EVAAELGSVGEEFEERRRCSMAASGG SDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAAT-ENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLS
        EGYY MLVKYREELTKPIQEAADFM R+ESQLNTLCNGSFQILASDAAT ENRDGMGSSEEEQEK GGE  RDATEQIDPRADERELKNHLLKKYSGYLS
Subjt:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAAT-ENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLS

Query:  TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYM
        TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNT   AAAFYFDG YM
Subjt:  TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYM

Query:  GDAHYRLGP
        GDAHYRLGP
Subjt:  GDAHYRLGP

XP_023536897.1 homeobox protein knotted-1-like 2 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-16797.73Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGG-SKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF
        MEDQYNPNFHYHHHQ+Q QQVHDFQISSGG SKD DIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGG-SKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF

Query:  MEGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLST
        MEGYY MLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEE EKGG+GGRDATEQIDPRADERELKNHLLKKYSGYLST
Subjt:  MEGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLST

Query:  LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG
        LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG
Subjt:  LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG

Query:  DAHYRLGP
        DAHYRLGP
Subjt:  DAHYRLGP

XP_023536898.1 homeobox protein knotted-1-like 2 isoform X2 [Cucurbita pepo subsp. pepo]4.9e-16597.08Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGG-SKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF
        MEDQYNPNFHYHHHQ+Q QQVHDFQISSGG SKD DIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGG-SKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF

Query:  MEGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLST
        MEGYY MLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILAS  ATENRDGMGSSEEE EKGG+GGRDATEQIDPRADERELKNHLLKKYSGYLST
Subjt:  MEGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLST

Query:  LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG
        LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG
Subjt:  LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG

Query:  DAHYRLGP
        DAHYRLGP
Subjt:  DAHYRLGP

TrEMBL top hitse value%identityAlignment
A0A6J1GGF7 homeobox protein knotted-1-like 24.9e-17198.7Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKD D+MKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
        EGYY MLVKYREELTKPIQEA+DFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
Subjt:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL

Query:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
        KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
Subjt:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD

Query:  AHYRLGP
        AHYRLGP
Subjt:  AHYRLGP

A0A6J1HDA6 homeotic protein knotted-1-like isoform X18.2e-12678.69Show/hide
Query:  HYHHHQEQQQQVH---DFQISSGGSKDTDI--MKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYY
        H+HHHQ      H   +FQISSGG+   D+  MKAKIISHS FSNLLQAFLDC+KVGAP EVAA+L SV EEFE+RRR SMA++GG +DPELD FME YY
Subjt:  HYHHHQEQQQQVH---DFQISSGGSKDTDI--MKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYY

Query:  MMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQEL
         MLVKYREELT+PI+EAADFM R+E QLNTLCN SFQILAS AATE +   G SEEEQEK  E  R+  +Q+DPRA+ERELKNHLLKKYSGYLS+LKQEL
Subjt:  MMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQEL

Query:  SKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN--TAAAAAAFYFDGHYMGDAH
        SKKKKKGKLPKDARQELLRWWE+H+KWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQ MGMEGFYHPN   AAAAAAFYFDGH+MGD+H
Subjt:  SKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN--TAAAAAAFYFDGHYMGDAH

Query:  YRLGP
        YRLGP
Subjt:  YRLGP

A0A6J1K3G1 homeotic protein knotted-1-like isoform X11.8e-12578.69Show/hide
Query:  HYHHHQEQQQQVH---DFQISSGG--SKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYY
        H+HHHQ      H   +FQIS GG  S D D MKAKIISHS FSNLLQAFLDC+KVGAP EVAA+L SVGEEFE+RRR S A++GG +DPELD FME YY
Subjt:  HYHHHQEQQQQVH---DFQISSGG--SKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYY

Query:  MMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQEL
         MLVKYREELT+PI+EAADFM R+E QLNTLCN SFQILAS AATE +   G SEEEQEK  E  R+  +Q+DPRA+ERELKNHLLKKYSGYLS+LKQEL
Subjt:  MMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQEL

Query:  SKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN--TAAAAAAFYFDGHYMGDAH
        SKKKKKGKLPKDARQELLRWWE+H+KWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSED Q MGMEGFYHPN   AAAAAAFYFDGH+MGD+H
Subjt:  SKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN--TAAAAAAFYFDGHYMGDAH

Query:  YRLGP
        YRLGP
Subjt:  YRLGP

A0A6J1KJZ1 homeotic protein knotted-1-like isoform X16.2e-15894.82Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHY HHQ+Q QQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAP EVAAELGSVGEEFEERRRCSMAASGG SDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAAT-ENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLS
        EGYY MLVKYREELTKPIQEAADFM R+ESQLNTLCNGSFQILASDAAT ENRDGMGSSEEEQEK GGE  RDATEQIDPRADERELKNHLLKKYSGYLS
Subjt:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAAT-ENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLS

Query:  TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYM
        TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNT   AAAFYFDG YM
Subjt:  TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYM

Query:  GDAHYRLGP
        GDAHYRLGP
Subjt:  GDAHYRLGP

A0A6J1KU25 homeotic protein knotted-1-like isoform X24.5e-15694.16Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHY HHQ+Q QQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAP EVAAELGSVGEEFEERRRCSMAASGG SDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLST
        EGYY MLVKYREELTKPIQEAADFM R+ESQLNTLCNGSFQILAS A  ENRDGMGSSEEEQEK GGE  RDATEQIDPRADERELKNHLLKKYSGYLST
Subjt:  EGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLST

Query:  LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG
        LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNT   AAAFYFDG YMG
Subjt:  LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG

Query:  DAHYRLGP
        DAHYRLGP
Subjt:  DAHYRLGP

SwissProt top hitse value%identityAlignment
O04134 Homeobox protein knotted-1-like 12.8e-9458.81Show/hide
Query:  QYNPNFHYHH----HQEQQQQVHDFQIS--------SGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGC
        QYN N + HH     +  Q  VH  Q +        S  S + + +KAKII+H Q+SNL++A++DC++VGAP++V   L    +EFE R+R S  +    
Subjt:  QYNPNFHYHH----HQEQQQQVHDFQIS--------SGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGC

Query:  SDPELDQFMEGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSF--QILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHL
         DPELDQFME YY MLVKYREELT+PIQEA DFM R+E+QLN L N +    +     + +  +G+GSSE+EQE    GG     +IDPRA++RELKNHL
Subjt:  SDPELDQFMEGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSF--QILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHL

Query:  LKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAA
        L+KYSGYLS+LKQELSKKKKKGKLPK+ARQ+LL WWE+H KWPYPSE+EK+ALAESTGLDQKQINNWFINQRKRHWKPSED+Q M M+G +  N     A
Subjt:  LKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAA

Query:  AFYFDGHYMGDAHYRLGP
        A Y DGHY GD HYRLGP
Subjt:  AFYFDGHYMGDAHYRLGP

O04135 Homeobox protein knotted-1-like 23.3e-9559.62Show/hide
Query:  QYNPNFHYH---HHQEQQQQVHDFQIS--------SGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCS
        QYN N + H     +  Q  +H  Q +        S  S + + +KAKII+H Q+SNLL+A++DC++VGAP++V A L    +EFE R+R S  +     
Subjt:  QYNPNFHYH---HHQEQQQQVHDFQIS--------SGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCS

Query:  DPELDQFMEGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSF--QILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLL
        DPELDQFME YY MLVKYREELT+PIQEA DFM R+E+QLN L N +    +     + +  +G+GSSEEEQE    GG     +IDPRA++RELKNHLL
Subjt:  DPELDQFMEGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSF--QILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLL

Query:  KKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAA
        +KYSGYLS+LKQELSKKKKKGKLPKDARQ+LL WWE+H KWPYPSE+EK+ALAESTGLDQKQINNWFINQRKRHWKPSED+Q M M+G +  N     AA
Subjt:  KKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAA

Query:  FYFDGHYMGDAHYRLGP
         Y DGHY+GD HYRLGP
Subjt:  FYFDGHYMGDAHYRLGP

P46609 Homeobox protein knotted-1-like 61.9e-8760.85Show/hide
Query:  SSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYMMLVKYREELTKPIQEAADFME
        S+  + D + +KAKIISH  +S+LL A+LDC+KVGAP EVAA L +V ++ E R+R ++   G  ++PELDQFME Y+ MLVKYREELT+P+QEA +F+ 
Subjt:  SSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYMMLVKYREELTKPIQEAADFME

Query:  RVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWE
        RVE+QLNTL         S  +  N    GSSEE+QE  G GG     +ID    ++ELK+HLLKKYSGYLS+LKQELSKKKKKGKLPKDARQ+LL WWE
Subjt:  RVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWE

Query:  VHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAH-YRLG
        +H KWPYPSE++K+ALAESTGLD KQINNWFINQRKRHWKPS+++Q + M+G YHP     AAAFY DGH++ D   YRLG
Subjt:  VHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAH-YRLG

P46639 Homeobox protein knotted-1-like 11.4e-9360.13Show/hide
Query:  HHHQEQQQQVHDFQISSGGS----KDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEER-RRCSMAASGGCSDPELDQFMEGYYMM
        +H+    + +H+ Q ++  +     D + MKAKII+H  +S LLQA+LDC+K+GAP +V   + +  ++FE R +R + + S    DPELDQFME Y  M
Subjt:  HHHQEQQQQVHDFQISSGGS----KDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEER-RRCSMAASGGCSDPELDQFMEGYYMM

Query:  LVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSK
        LVKYREELT+PIQEA +F+ R+ESQL+ LC     IL +       D MGSS+EEQE    GG     +IDPRA++RELKNHLLKKYSGYLS+LKQELSK
Subjt:  LVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSK

Query:  KKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAHYRLG
        KKKKGKLPK+ARQ+LL WWE+H KWPYPSE+EK+ALAESTGLDQKQINNWFINQRKRHWKPSED+Q M M+G  HP+     AA Y DGHYMGD  YRLG
Subjt:  KKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAHYRLG

Query:  P
        P
Subjt:  P

Q41330 Homeotic protein knotted-12.1e-9460.06Show/hide
Query:  YNPNFHY------HHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQ
        +N  FHY      HHH   +         +G  +  + +KAKII+H Q SNLL A++DC+KVGAP EVAA L +V +EFE R+R S+       DPELDQ
Subjt:  YNPNFHY------HHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQ

Query:  FMEGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLS
        FME YY MLVKYREELT+P+QEA +FM+++E+QLN L N   +I  S+   +  +G+GSSEE+Q+    GG     +IDPRA++RELKNHLL+KYSGYLS
Subjt:  FMEGYYMMLVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLS

Query:  TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYM
        +LKQELSKKKKKGKLPKDARQ+L+ WWE+H KWPYPSE+EK+ALAESTGLDQKQINNWFINQRKRHWKPSED+Q M M+G  HP    +AAA Y +GHYM
Subjt:  TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYM

Query:  GDAHYRLG
        G+  +RLG
Subjt:  GDAHYRLG

Arabidopsis top hitse value%identityAlignment
AT1G23380.1 KNOTTED1-like homeobox gene 62.0e-6049.17Show/hide
Query:  IMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYMMLVKYREELTKPIQEAADFMERVESQLNTL
        ++KAKI  H  +  LLQA++DC+KVGAP E+A  L  +  E +  ++  + +S   +DPELD+FME Y  +LVKY+ +L +P  EA  F+ ++E QL  L
Subjt:  IMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYMMLVKYREELTKPIQEAADFMERVESQLNTL

Query:  CNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPS
        C G        A   + DG+ SS+EE      G  +  E    R ++R+LK+ LL+K+   +STLK E SKKKKKGKLP++ARQ LL WW +H KWPYP+
Subjt:  CNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPS

Query:  EAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGME
        E +K+ALA++TGLDQKQINNWFINQRKRHWKPSE++    M+
Subjt:  EAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGME

AT1G23380.2 KNOTTED1-like homeobox gene 66.6e-5948.77Show/hide
Query:  IMKAKIISHSQFSNLLQAFLDC--KKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYMMLVKYREELTKPIQEAADFMERVESQLN
        ++KAKI  H  +  LLQA++DC  K+VGAP E+A  L  +  E +  ++  + +S   +DPELD+FME Y  +LVKY+ +L +P  EA  F+ ++E QL 
Subjt:  IMKAKIISHSQFSNLLQAFLDC--KKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYMMLVKYREELTKPIQEAADFMERVESQLN

Query:  TLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPY
         LC G        A   + DG+ SS+EE      G  +  E    R ++R+LK+ LL+K+   +STLK E SKKKKKGKLP++ARQ LL WW +H KWPY
Subjt:  TLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPY

Query:  PSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGME
        P+E +K+ALA++TGLDQKQINNWFINQRKRHWKPSE++    M+
Subjt:  PSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGME

AT1G62360.1 KNOX/ELK homeobox transcription factor1.1e-6652.36Show/hide
Query:  QVHDFQISSGG------SKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASG--GC--SDPELDQFMEGYYMMLVK
        ++H  +I +GG      S  +  +KAKI++H  +  LL A+++C+KVGAP EV A L    EE       + A+ G  GC   DP LDQFME Y  MLVK
Subjt:  QVHDFQISSGG------SKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASG--GC--SDPELDQFMEGYYMMLVK

Query:  YREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATE-NRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKK
        Y +EL+KP +EA  F++RVE Q  +L   S    +    T  +R+  GSSEEE +          E +DP+A++RELK  LL+KYSGYL +LKQE  KK+
Subjt:  YREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATE-NRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKK

Query:  KKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN
        KKGKLPK+ARQ+LL WW  H KWPYPSE +KLALAESTGLDQKQINNWFINQRKRHWKPSED+Q + M+   HP+
Subjt:  KKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 24.6e-6050Show/hide
Query:  IMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYMMLVKYREELTKPIQEAADFMERVESQLNTL
        ++K+KI SH  +  LLQ ++DC+KVGAP E+A  L  +  E    +R     S   +DPELD+FME Y  +LVKY+ +L +P  EA  F+ ++E QL  L
Subjt:  IMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYMMLVKYREELTKPIQEAADFMERVESQLNTL

Query:  CNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPS
        C G      + A   + DG  SS+EE  +  +   D ++Q   R+++R+LK+ LL+K+  ++S+LK E SKKKKKGKLP++ARQ LL WW VH+KWPYP+
Subjt:  CNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPS

Query:  EAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDV
        E +K++LAE TGLDQKQINNWFINQRKRHWKPSE++
Subjt:  EAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDV

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana9.7e-9560.13Show/hide
Query:  HHHQEQQQQVHDFQISSGGS----KDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEER-RRCSMAASGGCSDPELDQFMEGYYMM
        +H+    + +H+ Q ++  +     D + MKAKII+H  +S LLQA+LDC+K+GAP +V   + +  ++FE R +R + + S    DPELDQFME Y  M
Subjt:  HHHQEQQQQVHDFQISSGGS----KDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEER-RRCSMAASGGCSDPELDQFMEGYYMM

Query:  LVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSK
        LVKYREELT+PIQEA +F+ R+ESQL+ LC     IL +       D MGSS+EEQE    GG     +IDPRA++RELKNHLLKKYSGYLS+LKQELSK
Subjt:  LVKYREELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSK

Query:  KKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAHYRLG
        KKKKGKLPK+ARQ+LL WWE+H KWPYPSE+EK+ALAESTGLDQKQINNWFINQRKRHWKPSED+Q M M+G  HP+     AA Y DGHYMGD  YRLG
Subjt:  KKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAHYRLG

Query:  P
        P
Subjt:  P


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATCAGTACAACCCTAATTTTCATTATCATCATCATCAAGAACAGCAACAACAAGTTCATGATTTTCAAATAAGTAGCGGTGGGAGTAAGGATACTGATATCAT
GAAGGCCAAAATCATCTCCCACTCTCAATTCTCTAATCTCCTCCAAGCTTTCTTGGATTGCAAAAAGGTGGGAGCTCCGGCGGAGGTGGCGGCGGAACTTGGGTCGGTAG
GGGAGGAGTTTGAGGAGCGGCGGCGGTGTTCAATGGCGGCGAGTGGGGGTTGTAGTGATCCAGAACTTGATCAGTTCATGGAAGGTTACTATATGATGTTGGTGAAGTAT
AGAGAGGAGCTGACGAAGCCTATTCAAGAAGCTGCTGATTTCATGGAGAGAGTTGAATCTCAGCTCAATACTCTCTGTAATGGCTCCTTCCAAATCTTAGCTTCTGATGC
AGCGACAGAAAATCGCGACGGAATGGGATCATCGGAGGAGGAGCAAGAGAAGGGCGGGGAAGGCGGAAGAGATGCAACGGAACAGATCGACCCACGAGCAGACGAGCGAG
AGCTAAAGAATCACTTACTAAAGAAGTACAGTGGGTATCTGAGCACTCTAAAGCAAGAGCTTTCAAAGAAGAAGAAGAAAGGAAAGCTCCCAAAAGACGCAAGGCAGGAG
CTGCTGAGATGGTGGGAAGTGCACAGCAAATGGCCATACCCATCGGAGGCAGAGAAGTTGGCGCTAGCGGAATCAACTGGGTTGGATCAGAAACAGATAAATAATTGGTT
CATAAACCAGAGGAAAAGGCATTGGAAGCCGTCTGAGGATGTACAGTTGATGGGTATGGAGGGGTTTTACCATCCCAACACTGCTGCTGCTGCTGCTGCTTTTTACTTCG
ATGGGCATTACATGGGCGATGCCCATTACCGTTTGGGTCCATGA
mRNA sequenceShow/hide mRNA sequence
TTGTTGTTTTAATGGAAGATCAGTACAACCCTAATTTTCATTATCATCATCATCAAGAACAGCAACAACAAGTTCATGATTTTCAAATAAGTAGCGGTGGGAGTAAGGAT
ACTGATATCATGAAGGCCAAAATCATCTCCCACTCTCAATTCTCTAATCTCCTCCAAGCTTTCTTGGATTGCAAAAAGGTGGGAGCTCCGGCGGAGGTGGCGGCGGAACT
TGGGTCGGTAGGGGAGGAGTTTGAGGAGCGGCGGCGGTGTTCAATGGCGGCGAGTGGGGGTTGTAGTGATCCAGAACTTGATCAGTTCATGGAAGGTTACTATATGATGT
TGGTGAAGTATAGAGAGGAGCTGACGAAGCCTATTCAAGAAGCTGCTGATTTCATGGAGAGAGTTGAATCTCAGCTCAATACTCTCTGTAATGGCTCCTTCCAAATCTTA
GCTTCTGATGCAGCGACAGAAAATCGCGACGGAATGGGATCATCGGAGGAGGAGCAAGAGAAGGGCGGGGAAGGCGGAAGAGATGCAACGGAACAGATCGACCCACGAGC
AGACGAGCGAGAGCTAAAGAATCACTTACTAAAGAAGTACAGTGGGTATCTGAGCACTCTAAAGCAAGAGCTTTCAAAGAAGAAGAAGAAAGGAAAGCTCCCAAAAGACG
CAAGGCAGGAGCTGCTGAGATGGTGGGAAGTGCACAGCAAATGGCCATACCCATCGGAGGCAGAGAAGTTGGCGCTAGCGGAATCAACTGGGTTGGATCAGAAACAGATA
AATAATTGGTTCATAAACCAGAGGAAAAGGCATTGGAAGCCGTCTGAGGATGTACAGTTGATGGGTATGGAGGGGTTTTACCATCCCAACACTGCTGCTGCTGCTGCTGC
TTTTTACTTCGATGGGCATTACATGGGCGATGCCCATTACCGTTTGGGTCCATGACAGGAATTCAGATCGCATTGCTTCGAAGTCAGAGCTTGGTTTTAGCTGCTTATCC
TATATGGTATGCTAACTCTTTTTTAGTCCCTAGTGATTATAAAACAGGAAAAAAAAAAAGGAATGGGGTAATAGTTGATGATAGGGTATTTATTTTATTGTGTTTACTCA
TAATATTCTGCCTCTCATATGGTGAATATTCCTAAATGCATGTC
Protein sequenceShow/hide protein sequence
MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDTDIMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYMMLVKY
REELTKPIQEAADFMERVESQLNTLCNGSFQILASDAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQE
LLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAHYRLGP