| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6588778.1 Exosome complex component RRP42, partial [Cucurbita argyrosperma subsp. sororia] | 7.9e-142 | 82.44 | Show/hide |
Query: AISGLRIAAPVFFCRGPHTGSANTEGLVADKARAAPPSLDLVLCGSPEVGMKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVR
+I R PVFFCR PHTGSANTEGLVADKARAAPPSLDLVLCGSPEVGMKGLSVGEKLFIQGGIAQDLRTDGRRRL YRPISVETDVISQANGSARVR
Subjt: AISGLRIAAPVFFCRGPHTGSANTEGLVADKARAAPPSLDLVLCGSPEVGMKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVR
Query: MGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELSVALEQCLLGGKSGA--------------------------------
MGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELSVALE+CLLGGKSGA
Subjt: MGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELSVALEQCLLGGKSGA--------------------------------
Query: ----------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGV
GIPKVNVS EASANEQPEVDVSDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGV
Subjt: ----------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGV
Query: DPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
DPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
Subjt: DPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| KAG7022551.1 Exosome complex component RRP42, partial [Cucurbita argyrosperma subsp. argyrosperma] | 7.9e-174 | 100 | Show/hide |
Query: PLHSSFSAISTVRALSAGAVRRSPFPSLSSYHPAISGLRIAAPVFFCRGPHTGSANTEGLVADKARAAPPSLDLVLCGSPEVGMKGLSVGEKLFIQGGIA
PLHSSFSAISTVRALSAGAVRRSPFPSLSSYHPAISGLRIAAPVFFCRGPHTGSANTEGLVADKARAAPPSLDLVLCGSPEVGMKGLSVGEKLFIQGGIA
Subjt: PLHSSFSAISTVRALSAGAVRRSPFPSLSSYHPAISGLRIAAPVFFCRGPHTGSANTEGLVADKARAAPPSLDLVLCGSPEVGMKGLSVGEKLFIQGGIA
Query: QDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELSVALEQCLLGGKSG
QDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELSVALEQCLLGGKSG
Subjt: QDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELSVALEQCLLGGKSG
Query: AGIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHV
AGIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHV
Subjt: AGIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHV
Query: SEQLLNKLDSEIAAAEADEEE
SEQLLNKLDSEIAAAEADEEE
Subjt: SEQLLNKLDSEIAAAEADEEE
|
|
| XP_022927940.1 exosome complex component RRP42 [Cucurbita moschata] | 4.7e-118 | 82.87 | Show/hide |
Query: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Subjt: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Query: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
TELSVALE+CLLGGKSGA GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
Subjt: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
Query: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
Subjt: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| XP_022988876.1 exosome complex component RRP42 [Cucurbita maxima] | 7.5e-116 | 81.47 | Show/hide |
Query: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
MKGLSVGEKLFI+GGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Subjt: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Query: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
TELSV+LE+CLLGGKSGA GIPKVNVS EASANEQPEVDVSDEEFLQFDTSGV
Subjt: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
Query: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRH HVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
Subjt: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| XP_023529361.1 exosome complex component RRP42 [Cucurbita pepo subsp. pepo] | 1.4e-117 | 82.52 | Show/hide |
Query: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Subjt: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Query: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
TELSVALE+CLLGGKSGA GIPKVNVS EASANEQPEVDVSDEEFLQFDTSGV
Subjt: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
Query: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
Subjt: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LU91 Uncharacterized protein | 1.2e-106 | 73.78 | Show/hide |
Query: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
M GLS GEKLFIQ GIAQDLRTDGR RLTYRPIS+ETDVISQANGSARVRMGGTEVIATVKAELGRPN MQPDKGKVSI VDCSPTAEP FEGRGGEEL+
Subjt: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Query: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
TELS+ALE+CLLGGKSG+ GIPKV+V+ EA NEQPEVDVSDEEFLQFDTSGV
Subjt: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
Query: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
P IVTLTKVG+HYIVDATLEEESQMSSA+SIS++RHGH+CGLTKRGG GVDPS+ILDMISVGKHVSE+LLNKLDSEI AAEADEEE
Subjt: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| A0A1S3B3T5 exosome complex component RRP42-like | 7.1e-104 | 71.68 | Show/hide |
Query: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
M GLS GEKLFIQ GIAQDLRTDGR RLTYRPIS+ETDVISQANGSARVRMGGTEVIATVKAELGRPN MQ +KGKVSI VDCSP AEP FEGRGGEEL+
Subjt: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Query: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
TELSVALE+CLLGGKSG+ GIPKV+++ EAS NEQPEVDVSDEEF+QF+TSGV
Subjt: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
Query: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
P IVTLTKVG+HYI+DATLEEESQMSSA+SIS+NRHGH+CGLTKRGG GVDPS+ILDMISVGK+VSE+LLNKLDSEI AAE DEEE
Subjt: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| A0A6J1C1R4 exosome complex component RRP42 | 7.3e-109 | 75.17 | Show/hide |
Query: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
M GLS+GEK FIQGGIAQDLR+DGR RLTYRPISVETDVISQANGSARV+MGGTEVIA VKAELGRPNAMQPDKGKVSI VDCSP AEP FEGRGGEEL+
Subjt: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Query: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
TELSVAL++CLLGGKSGA GIPKVNV+ EASA++QPEVD+SDEEFLQFDTSGV
Subjt: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
Query: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
PVIVTLTKVGRHYIVDATLEEESQM+SAISIS+NRHGH+CG+TKRGGAGVDPS+ILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
Subjt: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| A0A6J1EQ99 exosome complex component RRP42 | 2.3e-118 | 82.87 | Show/hide |
Query: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Subjt: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Query: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
TELSVALE+CLLGGKSGA GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
Subjt: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
Query: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
Subjt: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| A0A6J1JIH0 exosome complex component RRP42 | 3.6e-116 | 81.47 | Show/hide |
Query: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
MKGLSVGEKLFI+GGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Subjt: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELA
Query: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
TELSV+LE+CLLGGKSGA GIPKVNVS EASANEQPEVDVSDEEFLQFDTSGV
Subjt: TELSVALEQCLLGGKSGA------------------------------------------------GIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGV
Query: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRH HVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
Subjt: PVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O26778 Exosome complex component Rrp42 | 1.0e-19 | 26.94 | Show/hide |
Query: RTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELSVALEQCLL--------
R DGR +R IS+ET VIS+A GS+RV++G T++I VK ++G P P+ G + + P A PTFE +E + ELS +++C+
Subjt: RTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELSVALEQCLL--------
Query: -----------------------GGKSGAGI-----PKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISIS
G A + ++ + A+ E EV ++ E+ + ++ T K+G ++D +LEEE +++ ISI
Subjt: -----------------------GGKSGAGI-----PKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISIS
Query: VNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEI
V G +C + K G + +L +S+ QL+ LD +
Subjt: VNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEI
|
|
| Q15024 Exosome complex component RRP42 | 1.8e-35 | 33.94 | Show/hide |
Query: LSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATEL
LS EK++I G+ +DLR DGR YR + VETDV+S +GSARV++G T+++ VKAE+G P +P++G + FVDCS +A P FEGRGG++L TE+
Subjt: LSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATEL
Query: SVAL--------------------EQCLL----------GGK-------------SGAGIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTK
+ L E C + GG IP+V V + ++ E+ + ++ VP IVTL K
Subjt: SVAL--------------------EQCLL----------GGK-------------SGAGIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTK
Query: VGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEA
+G ++VDATL+EE+ +++ +SV G V + K G +DP I +M+ GK V + L L S + E+
Subjt: VGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEA
|
|
| Q54VM4 Putative exosome complex exonuclease RRP42 | 4.7e-28 | 29.78 | Show/hide |
Query: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGR------PNAMQPDKGKVSIF-VDCSPTAEPTFEG
M+ +S E LFIQ G+ ++R+DGR R+ YR ++ET I ANGSARV++ TEV+ VKAE+ N Q D K +F V+C P+A P FEG
Subjt: MKGLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGR------PNAMQPDKGKVSIF-VDCSPTAEPTFEG
Query: RGGEELATELSVALEQ-----------------------------------------------------CLLGGK--------------SGAGIPKVNVS
+G E L ELS LE+ ++ GK G ++++
Subjt: RGGEELATELSVALEQ-----------------------------------------------------CLLGGK--------------SGAGIPKVNVS
Query: ------------VEASANEQPEV--DVSD--EEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDM
V+A E E+ +VSD E+ L VP+ VTLTK+G +++D TL+EE M++ +++ VN ++C + K G G+DP+ I M
Subjt: ------------VEASANEQPEV--DVSD--EEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDM
Query: ISVGKHVSEQLLNKLDSEI
I+ K V ++LN +D +
Subjt: ISVGKHVSEQLLNKLDSEI
|
|
| Q8TYC2 Exosome complex component Rrp42 | 2.1e-20 | 30.49 | Show/hide |
Query: RTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELS------------VALE
R DGR +RPI V VIS+ANGSA VR+G T+++ VK E+GRP P++G +++ + P A+P+FE +E A ELS + LE
Subjt: RTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELS------------VALE
Query: QCLLGGKSGAGIPKVNVSV-----------------EASANEQPEVDVSDE--EFLQFDT-----SGVPVIVTLTKVGRHYIVDATLEEESQMSSAISIS
+ + + V++ V S E P+ +V D+ E ++ DT + P+ VT+ KVG + +VD LEEE M + ++++
Subjt: QCLLGGKSGAGIPKVNVSV-----------------EASANEQPEVDVSDE--EFLQFDT-----SGVPVIVTLTKVGRHYIVDATLEEESQMSSAISIS
Query: VNRHGHVCGLTKRGGAGVDPSVIL-DMISVGKHVSEQLLNKLDSEI
V G VC + K G G P +L D I + +E++ + +++
Subjt: VNRHGHVCGLTKRGGAGVDPSVIL-DMISVGKHVSEQLLNKLDSEI
|
|
| Q9D0M0 Exosome complex exonuclease RRP42 | 1.3e-33 | 33.58 | Show/hide |
Query: LSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATEL
LS EK++I G+ +DLR DGR YR + VETDV+S +GSARV++G T+++ VKAE+G P +P++G + FVDCS A P FEGRGG++L TE+
Subjt: LSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATEL
Query: SVAL--------------------EQCLL----------GGK-------------SGAGIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTK
+ L E C + GG IP+V V + + E+ + ++ VP IVTL K
Subjt: SVAL--------------------EQCLL----------GGK-------------SGAGIPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPVIVTLTK
Query: VGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEA
+G ++VDATL+EE+ +++ +SV G V + K G +DP I +M+ K V + L L S + E+
Subjt: VGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEA
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G07750.1 3'-5'-exoribonuclease family protein | 3.4e-98 | 65.49 | Show/hide |
Query: GLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATE
GLS+GE+ FI+GGIAQDLRTDGR+RLTYRPI VET VI QANGSARVR+GGT+VIA+VKAE+GRP+++QPDKGKV++F+DCSPTAEPTF GRGGEEL++E
Subjt: GLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATE
Query: LSVALEQCLLGGKSGAG------------------------------------------------IPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPV
L++AL++CLLGGKSGAG IPKVNVS E + +EQPE+D+SDEE+LQFDTS VPV
Subjt: LSVALEQCLLGGKSGAG------------------------------------------------IPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPV
Query: IVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
IVTLTKVG HYIVDAT EEESQMSSA+SISVNR GH+CGLTKR G+G+DPSVILDMISV KHV+E L++KLDSEI+AAEA E+E
Subjt: IVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| AT3G07750.2 3'-5'-exoribonuclease family protein | 3.4e-98 | 65.49 | Show/hide |
Query: GLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATE
GLS+GE+ FI+GGIAQDLRTDGR+RLTYRPI VET VI QANGSARVR+GGT+VIA+VKAE+GRP+++QPDKGKV++F+DCSPTAEPTF GRGGEEL++E
Subjt: GLSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATE
Query: LSVALEQCLLGGKSGAG------------------------------------------------IPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPV
L++AL++CLLGGKSGAG IPKVNVS E + +EQPE+D+SDEE+LQFDTS VPV
Subjt: LSVALEQCLLGGKSGAG------------------------------------------------IPKVNVSVEASANEQPEVDVSDEEFLQFDTSGVPV
Query: IVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
IVTLTKVG HYIVDAT EEESQMSSA+SISVNR GH+CGLTKR G+G+DPSVILDMISV KHV+E L++KLDSEI+AAEA E+E
Subjt: IVTLTKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
|
|
| AT3G60500.1 3'-5'-exoribonuclease family protein | 2.9e-17 | 26.74 | Show/hide |
Query: LSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFE-GRGGEELATE
L+V E F++ + +LR DGR YR ++++ + GS+ V++G T V+ V A+L +P +P++G +SIF + SP A+P+FE GR GE A E
Subjt: LSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFE-GRGGEELATE
Query: LSVALEQ-------------CLLGGK--------------SGAGIPKVNVSVEAS--ANEQPEVDVSDE-------------EFLQFDTSGVPVIVT--L
L +++ C+L GK G + N++ A+ +P+ V E E L +P+ T
Subjt: LSVALEQ-------------CLLGGK--------------SGAGIPKVNVSVEAS--ANEQPEVDVSDE-------------EFLQFDTSGVPVIVT--L
Query: TKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAA
G ++D T EE+ M ++++VN +G +C + K G GV+ SVIL + + + + E+ A
Subjt: TKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAA
|
|
| AT3G60500.2 3'-5'-exoribonuclease family protein | 2.9e-17 | 26.74 | Show/hide |
Query: LSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFE-GRGGEELATE
L+V E F++ + +LR DGR YR ++++ + GS+ V++G T V+ V A+L +P +P++G +SIF + SP A+P+FE GR GE A E
Subjt: LSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFE-GRGGEELATE
Query: LSVALEQ-------------CLLGGK--------------SGAGIPKVNVSVEAS--ANEQPEVDVSDE-------------EFLQFDTSGVPVIVT--L
L +++ C+L GK G + N++ A+ +P+ V E E L +P+ T
Subjt: LSVALEQ-------------CLLGGK--------------SGAGIPKVNVSVEAS--ANEQPEVDVSDE-------------EFLQFDTSGVPVIVT--L
Query: TKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAA
G ++D T EE+ M ++++VN +G +C + K G GV+ SVIL + + + + E+ A
Subjt: TKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAA
|
|
| AT3G60500.3 3'-5'-exoribonuclease family protein | 2.9e-17 | 26.74 | Show/hide |
Query: LSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFE-GRGGEELATE
L+V E F++ + +LR DGR YR ++++ + GS+ V++G T V+ V A+L +P +P++G +SIF + SP A+P+FE GR GE A E
Subjt: LSVGEKLFIQGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATVKAELGRPNAMQPDKGKVSIFVDCSPTAEPTFE-GRGGEELATE
Query: LSVALEQ-------------CLLGGK--------------SGAGIPKVNVSVEAS--ANEQPEVDVSDE-------------EFLQFDTSGVPVIVT--L
L +++ C+L GK G + N++ A+ +P+ V E E L +P+ T
Subjt: LSVALEQ-------------CLLGGK--------------SGAGIPKVNVSVEAS--ANEQPEVDVSDE-------------EFLQFDTSGVPVIVT--L
Query: TKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAA
G ++D T EE+ M ++++VN +G +C + K G GV+ SVIL + + + + E+ A
Subjt: TKVGRHYIVDATLEEESQMSSAISISVNRHGHVCGLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAA
|
|
