; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23987 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23987
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlycine-rich RNA-binding protein
Genome locationCarg_Chr11:9765948..9768550
RNA-Seq ExpressionCarg23987
SyntenyCarg23987
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022557.1 Glycine-rich RNA-binding protein RZ1A [Cucurbita argyrosperma subsp. argyrosperma]4.1e-110100Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
        RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY

Query:  ERRSSGSGGFRS
        ERRSSGSGGFRS
Subjt:  ERRSSGSGGFRS

XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]5.1e-9792.06Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPR-
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPR-

Query:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSG
        GRD++RDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKY  GGGGGGGGSGRYGPDRNGDR GGRNR TGDRGGSGSDRYSRDRSG
Subjt:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSG

Query:  PYERRSSGSGGFRS
        PYERR  GSGGFRS
Subjt:  PYERRSSGSGGFRS

XP_022927772.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita moschata]6.5e-10899.06Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
        RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS  GGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY

Query:  ERRSSGSGGFRS
        ERRSSGSGGFRS
Subjt:  ERRSSGSGGFRS

XP_022988948.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita maxima]9.4e-10798.11Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
        RD++RDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGG GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY

Query:  ERRSSGSGGFRS
        ERRSSGSGGFRS
Subjt:  ERRSSGSGGFRS

XP_023531290.1 glycine-rich RNA-binding protein RZ1A-like isoform X1 [Cucurbita pepo subsp. pepo]2.2e-10899.06Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS-GGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGP
        RDN+RDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGP
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS-GGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGP

Query:  YERRSSGSGGFRS
        YERRSSGSGGFRS
Subjt:  YERRSSGSGGFRS

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein5.2e-9591.12Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPR-
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPR-

Query:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSG
        GRD++RDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGR GGRYGGRDDKYSGGGGGGG  GRYGPDRNGDR GGRNR +GDRGGSGSDRYSRDRSG
Subjt:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSG

Query:  PYERRSSGSGGFRS
        PYERR  GSGGFRS
Subjt:  PYERRSSGSGGFRS

A0A1S3C164 glycine-rich RNA-binding protein RZ1A2.5e-9792.06Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPR-
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPR-

Query:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSG
        GRD++RDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKY  GGGGGGGGSGRYGPDRNGDR GGRNR TGDRGGSGSDRYSRDRSG
Subjt:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSG

Query:  PYERRSSGSGGFRS
        PYERR  GSGGFRS
Subjt:  PYERRSSGSGGFRS

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A9.5e-9791.04Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEE EYRCFIGGLSWSTSDR LKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
        RD++RDRNRDFGGGRGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS    GGGGSGRYGPDRNGDR GGRNR +GDRGGSGSDR++RDRSGPY
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY

Query:  ERRSSGSGGFRS
        ERRS  SGGFRS
Subjt:  ERRSSGSGGFRS

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like3.1e-10899.06Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
        RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS  GGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY

Query:  ERRSSGSGGFRS
        ERRSSGSGGFRS
Subjt:  ERRSSGSGGFRS

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like4.5e-10798.11Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
        RD++RDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGG GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY

Query:  ERRSSGSGGFRS
        ERRSSGSGGFRS
Subjt:  ERRSSGSGGFRS

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A3.2e-2544.44Show/hide
Query:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER
        EYRCF+GGL+W+T DR L+ AF ++G + ++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG DLDGR+ITV++AQ ++GSG               
Subjt:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER

Query:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRY--GGRDDKYSGGGGG----GGGSGRYGPDRNGDRSGGRNRDTGDRGGSG
              GGG G      ++ G  G +       GG GG Y  GGR+  YSGGGGG    GGG G YG    G R GG     G  GG G
Subjt:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRY--GGRDDKYSGGGGG----GGGSGRYGPDRNGDRSGGRNRDTGDRGGSG

Q03250 Glycine-rich RNA-binding protein 77.9e-2446.52Show/hide
Query:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER
        EYRCF+GGL+W+T DR L+ AF ++G + ++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGR+ITV++AQ ++GSG    G   RG     
Subjt:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER

Query:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGG----GGGSGRYGPDRNGDRSGGRNRDTGDRGGSG
              GGG G      ++ G  G ++    S GG GGR  G    YSGGGGG    GGG G YG    G R GG     G+ GG G
Subjt:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGG----GGGSGRYGPDRNGDRSGGRNRDTGDRGGSG

Q03878 Glycine-rich RNA-binding protein3.5e-2445.5Show/hide
Query:  EGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDN
        E EYRCF+GGL+W+T+D  L++AF +FG + ++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG +LDGR ITV++AQ ++GSG    G R  G   
Subjt:  EGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDN

Query:  ERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRY
               +GGG G   R                 EGG GG YGGR  +  GGGG GGG G YG    G R GG   D G  GG G  R+
Subjt:  ERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRY

Q99070 Glycine-rich RNA-binding protein 26.7e-2342.41Show/hide
Query:  AEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR
        A + EYRCF+GGL+W+T++  L++AF  FG + ++KV+ D+ +GRSRGFGFVTF  +++M +AI+ MNG +LDGR ITV++AQ   G G           
Subjt:  AEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR

Query:  DNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS--GGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSD
                  GGG G         G  G+  RE    GG GG YGGR +     GGGG GGG G YG    G   GG     G+RG SG +
Subjt:  DNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS--GGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSD

Q9LIN3 Glycine-rich RNA-binding protein RZ1A1.2e-6158.87Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDNDGDRPR
        M+E+ EYRCFIGGL+W+TSDRGL++AFEK+GHL EAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR ITVDKAQP+Q G+GRDNDGDR R
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDNDGDRPR

Query:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYSGG-----------GGG
         R  +RDR+R   GGRG    DCFKCGKPGHFARECPSE  R G                              RYG +DD+YS             G  
Subjt:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYSGG-----------GGG

Query:  GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYERRSSG
         GG  RYGPDR+G+R+GGR+RD G RG  G +R+SR    PY+R  +G
Subjt:  GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYERRSSG

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 25.6e-2546.52Show/hide
Query:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER
        EYRCF+GGL+W+T DR L+ AF ++G + ++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGR+ITV++AQ ++GSG    G   RG     
Subjt:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER

Query:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGG----GGGSGRYGPDRNGDRSGGRNRDTGDRGGSG
              GGG G      ++ G  G ++    S GG GGR  G    YSGGGGG    GGG G YG    G R GG     G+ GG G
Subjt:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGG----GGGSGRYGPDRNGDRSGGRNRDTGDRGGSG

AT2G21660.2 cold, circadian rhythm, and rna binding 22.8e-2446.39Show/hide
Query:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER
        EYRCF+GGL+W+T DR L+ AF ++G + ++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGR+ITV++AQ ++GSG    G R  G     
Subjt:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER

Query:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNG
             +GGG G         G  G ++    S GG GG YGG   +  GGG GGG  G YG    G
Subjt:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain8.8e-6358.87Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDNDGDRPR
        M+E+ EYRCFIGGL+W+TSDRGL++AFEK+GHL EAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR ITVDKAQP+Q G+GRDNDGDR R
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDNDGDRPR

Query:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYSGG-----------GGG
         R  +RDR+R   GGRG    DCFKCGKPGHFARECPSE  R G                              RYG +DD+YS             G  
Subjt:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYSGG-----------GGG

Query:  GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYERRSSG
         GG  RYGPDR+G+R+GGR+RD G RG  G +R+SR    PY+R  +G
Subjt:  GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYERRSSG

AT4G39260.1 cold, circadian rhythm, and RNA binding 11.5e-2245.16Show/hide
Query:  EGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDN
        E EYRCF+GGL+W+T+D  L+  F +FG + ++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG    G   RG   
Subjt:  EGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDN

Query:  ERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSG
                GGG  S     +  G  G ++      GG GG Y  R   Y SGGGGGG G G  G    G   GG   D G  GG G
Subjt:  ERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain6.8e-2339.21Show/hide
Query:  AEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR
        A+EG  R F+GGLS   +DR L+ AF +FG + + ++++++ +GRSRGFGF+TF +++AMDE+I+ M+G D   R I+V++A+P  G           GR
Subjt:  AEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR

Query:  DNERD--RNRDFGGGRGSNSR----DCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGGGGGSGRYGP-DRNGDRS-------------GGRNRD
        D+         FGGG G   R    +CFKCG+ GH+AR+CPS  GGRGG  GG   + S  GG  G   RY   DR  DR              G R+R 
Subjt:  DNERD--RNRDFGGGRGSNSR----DCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGGGGGSGRYGP-DRNGDRS-------------GGRNRD

Query:  TGDRGGSGSDRYSRDR-SGPYERRSSG
                 DRY+ DR + P +R + G
Subjt:  TGDRGGSGSDRYSRDR-SGPYERRSSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAGAGGGGGAGTATCGGTGCTTTATTGGCGGCCTTTCTTGGTCAACTAGTGACAGAGGTCTTAAAGAAGCATTCGAAAAGTTTGGCCATCTTCAAGAGGCCAA
GGTAGTTGTTGACAAGTTTTCTGGGCGTTCCCGTGGTTTTGGTTTTGTTACTTTTGATGAGAAGAAAGCTATGGATGAGGCAATCAAAGCCATGAATGGAATGGATTTAG
ATGGCCGGGCTATTACAGTTGATAAGGCTCAGCCTAACCAAGGTTCAGGTAGAGACAACGATGGTGATCGTCCACGTGGTCGTGACAACGAGCGTGATCGAAATCGAGAT
TTTGGTGGTGGGCGTGGATCTAACAGTAGAGATTGCTTTAAATGTGGGAAGCCAGGGCATTTTGCCCGGGAATGTCCCAGTGAAGGCGGTAGAGGAGGTAGGTATGGAGG
GAGGGATGACAAATATAGTGGCGGCGGCGGCGGTGGCGGTGGCAGTGGTCGTTATGGACCAGATCGAAATGGAGATAGATCTGGTGGGCGCAATAGGGATACTGGTGATC
GAGGAGGTTCGGGAAGTGATCGATACAGTCGCGACCGCTCTGGGCCATATGAACGACGGAGTTCAGGTTCTGGTGGCTTTCGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
TTGACTGGCTCTTTGCCCTACAACCAGTTTAACCATTCCACCATCACTACCGCCTTTGGTTCCTCTCGAAAGTGAATCGAATTCTAGGGCTTTCGTTCTTCGGAAATTAT
TAGCTCAATTTTGCTGCTCGTGTAATGGCTGAAGAGGGGGAGTATCGGTGCTTTATTGGCGGCCTTTCTTGGTCAACTAGTGACAGAGGTCTTAAAGAAGCATTCGAAAA
GTTTGGCCATCTTCAAGAGGCCAAGGTAGTTGTTGACAAGTTTTCTGGGCGTTCCCGTGGTTTTGGTTTTGTTACTTTTGATGAGAAGAAAGCTATGGATGAGGCAATCA
AAGCCATGAATGGAATGGATTTAGATGGCCGGGCTATTACAGTTGATAAGGCTCAGCCTAACCAAGGTTCAGGTAGAGACAACGATGGTGATCGTCCACGTGGTCGTGAC
AACGAGCGTGATCGAAATCGAGATTTTGGTGGTGGGCGTGGATCTAACAGTAGAGATTGCTTTAAATGTGGGAAGCCAGGGCATTTTGCCCGGGAATGTCCCAGTGAAGG
CGGTAGAGGAGGTAGGTATGGAGGGAGGGATGACAAATATAGTGGCGGCGGCGGCGGTGGCGGTGGCAGTGGTCGTTATGGACCAGATCGAAATGGAGATAGATCTGGTG
GGCGCAATAGGGATACTGGTGATCGAGGAGGTTCGGGAAGTGATCGATACAGTCGCGACCGCTCTGGGCCATATGAACGACGGAGTTCAGGTTCTGGTGGCTTTCGTTCT
TGATAGAATCGTGTCTTCTCTGTTAAGCTTACATGGAGGGATCTTGCTGTTATGTCCTGCAGAGTGTTAATGTTTCTTTCAACAGGTTGTCTATGTTACAGTTCAGATAT
CTGAAGTGCAGAACTTGGCGTTAGTATTGAGACATTTGTGTTCCTATGTGATGAATTTGGTATCTTGGTACAATGGTGTCTAATGTGTTCTTGACATATTCATTCAAATC
TGGTTTTATGGTCTTTGAATGCCAATGTAGCTGCTGGATTACTTATCACAGGGAAATTGCAATAACTGCTAAAAATTTCTATTAAAGTACAACTAGACCTGGTTTTTGAT
CTGGATGGGTATTGAGAGGATCGGGTTTTTGATAAGCTGCGACTAGTGATCTGTGTCCCGACCCGGAAAGTTGGAAGTTCTTCCCATTGTCTTGGAGGAATTTACAGGTA
ATTACTCTTCTTTCTGGTGCCTTCTACTAGTATGATGACCTATCTATCTATCATCTGTTGTGTTATATTGATTGTGTAAACTTTTTGGCAGCATTGTTCCTTTTTATGAT
CTTTTTGGGTGCATAATACCGTTTCTTGTTAACTTAAAACATACCAAAGCCTTTGGGATGCTCAAGCAATTTTGCAAATAAAATCATTTAATCTACAAATACGTCCTGCT
GGCTTATGGTCGAGTGGTCTCGTACACGCTAAAACGCTCGGCAAGTTGTTTGGAAGCTCTTGAGAGTTCAGCAACTGCTGCCCTATCTTTTCCACTTGTGAGTCCTATTT
CCAGTCTGCTCTTGTTGGGGAGTCTTTTGGTGTTCTTGGTTTTGTTTGCGGAGATTGATTCAGATGTTTGGAGTTTCTATGATGATCATCATCGTCCCTTTCACCTTGTC
TGCTTGTTGGATGATAAGTCTGGTTCCTTGTCCTTTGAGGTTTCTTTCTGTTCTTTTCCTTGTCTGTTATACGATTAAAGGAAACCATCTCGTGTCGCCTCTTTCCCGTT
TGCTATACCATGTGGAAAGTGTTATAGGTGTGACCGAGGAAGCTAAATAGTGTCCCGACACCAACCCCGACACCAACCCCGACAACAAATGTTTACAGATTATACTGCAA
ACTCCTTCGGCTTTTTTGTTCTTTTC
Protein sequenceShow/hide protein sequence
MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNERDRNRD
FGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYERRSSGSGGFRS