; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg23996 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg23996
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear transcription factor Y subunit C
Genome locationCarg_Chr11:9853090..9853899
RNA-Seq ExpressionCarg23996
SyntenyCarg23996
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136852.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus]2.6e-13094.4Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSD
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQPRP +PFMPWPHT   Q QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSD

XP_022927856.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]9.6e-141100Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA
        SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA

XP_022988890.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]2.1e-14099.63Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA
        SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA

XP_023529250.1 nuclear transcription factor Y subunit C-2-like [Cucurbita pepo subsp. pepo]2.6e-13899.26Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA
        SPADLPYYYVPSQHPVSATGMIMGKQLDQANMY ATAQQPRPPIPFMPWPHTQA QQQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA

XP_038888434.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida]1.0e-12993.68Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        MDQSERSQH QQSQQ AG VGAGQLPYSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQ NMYG TAQQPRP +PFMPWPHT   Q QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA

TrEMBL top hitse value%identityAlignment
A0A0A0K5U1 Histone domain-containing protein1.3e-13094.4Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSD
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQPRP +PFMPWPHT   Q QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSD

A0A1S3C190 nuclear transcription factor Y subunit C-21.3e-13094.4Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSD
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQPRP +PFMPWPHT   Q QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSD

A0A5A7SLP2 Nuclear transcription factor Y subunit C-21.3e-13094.4Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSD
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQPRP +PFMPWPHT   Q QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSD

A0A6J1EIQ0 nuclear transcription factor Y subunit C-2-like4.7e-141100Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA
        SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA

A0A6J1JII4 nuclear transcription factor Y subunit C-2-like1.0e-14099.63Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA
        SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-45.4e-6258.17Show/hide
Query:  QSQQAAGGVGAGQ--LPYSNPYQTAPMGASGTPAITIPPTQQPSSFS--NSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLA
        Q Q A G V  G    P   P  T P   +  PA + P    P++    ++ HQL +QQAQ FHQQ QQQQQ+QLQ FWA ++ +IEQTTDFKNHSLPLA
Subjt:  QSQQAAGGVGAGQ--LPYSNPYQTAPMGASGTPAITIPPTQQPSSFS--NSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLA

Query:  RIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LP
        RIKKIMKADEDVRMISAEAPVIFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +A +P +G PAD  P
Subjt:  RIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LP

Query:  Y-YYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSD
        Y YYVP Q  V   G+  G Q       G   Q P              Q+QQ++   +QQSD
Subjt:  Y-YYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSD

Q8L4B2 Nuclear transcription factor Y subunit C-92.0e-5657.25Show/hide
Query:  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARI
        QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLAF Q    HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARI
Subjt:  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARI

Query:  KKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYY
        KKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY 
Subjt:  KKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYY

Query:  YVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQ
        Y+P+   P+   GM+MG      N  GA      PP P+M  P  Q Q   Q  Q
Subjt:  YVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQ

Q8LCG7 Nuclear transcription factor Y subunit C-22.8e-6669.16Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        M+QSE  Q QQQ          G + Y                  +PP    S   N+   +AFQQA HFH   QQQQQQQLQ+FWANQMQEIE TTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV
        NH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VV
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV

Query:  GSPADLPYYYVPSQ
        GSP   PYYY+  Q
Subjt:  GSPADLPYYYVPSQ

Q9SMP0 Nuclear transcription factor Y subunit C-12.7e-5365.45Show/hide
Query:  QQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL
        QQQQQQLQ+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIAAAI+RTD+FDFL
Subjt:  QQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL

Query:  VDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP
        VDI+PRDE+K+E   +    + V  + + +PYYY P   P    GM++G+     N  G   Q P
Subjt:  VDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP

Q9ZVL3 Nuclear transcription factor Y subunit C-35.1e-5255.78Show/hide
Query:  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIK
        QQ Q +A   G      SNPYQ        T A+T  PT        S H  A+ Q    HQQQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIK
Subjt:  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYV
        KIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   A      + A  PY Y+
Subjt:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYV

Query:  -PSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQ
         P   P+   GM+MG         GA      PP P+M  P  Q    +QQ
Subjt:  -PSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQ

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C91.4e-5757.25Show/hide
Query:  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARI
        QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLAF Q    HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARI
Subjt:  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARI

Query:  KKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYY
        KKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY 
Subjt:  KKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYY

Query:  YVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQ
        Y+P+   P+   GM+MG      N  GA      PP P+M  P  Q Q   Q  Q
Subjt:  YVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQ

AT1G08970.3 nuclear factor Y, subunit C91.4e-5757.25Show/hide
Query:  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARI
        QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLAF Q    HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARI
Subjt:  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARI

Query:  KKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYY
        KKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY 
Subjt:  KKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYY

Query:  YVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQ
        Y+P+   P+   GM+MG      N  GA      PP P+M  P  Q Q   Q  Q
Subjt:  YVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQ

AT1G08970.4 nuclear factor Y, subunit C91.4e-5757.25Show/hide
Query:  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARI
        QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLAF Q    HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARI
Subjt:  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARI

Query:  KKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYY
        KKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY 
Subjt:  KKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYY

Query:  YVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQ
        Y+P+   P+   GM+MG      N  GA      PP P+M  P  Q Q   Q  Q
Subjt:  YVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQ

AT1G56170.1 nuclear factor Y, subunit C22.0e-6769.16Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        M+QSE  Q QQQ          G + Y                  +PP    S   N+   +AFQQA HFH   QQQQQQQLQ+FWANQMQEIE TTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV
        NH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VV
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV

Query:  GSPADLPYYYVPSQ
        GSP   PYYY+  Q
Subjt:  GSPADLPYYYVPSQ

AT1G56170.2 nuclear factor Y, subunit C22.0e-6769.16Show/hide
Query:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK
        M+QSE  Q QQQ          G + Y                  +PP    S   N+   +AFQQA HFH   QQQQQQQLQ+FWANQMQEIE TTDFK
Subjt:  MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV
        NH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VV
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV

Query:  GSPADLPYYYVPSQ
        GSP   PYYY+  Q
Subjt:  GSPADLPYYYVPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCCCAGCAGGCTGCAGGCGGTGTTGGTGCAGGACAATTACCATATTCTAATCCTTACCAAACAGCTCCAATGGG
GGCGTCCGGAACGCCTGCTATTACGATTCCCCCGACTCAGCAACCATCCAGTTTCTCCAACTCTCCACACCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCAGCAGC
AGCAGCAACAACAGCAACAACAGCTCCAAGTGTTCTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTTGCTCGAATCAAG
AAAATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCGCCAGTTATATTTGCAAAGGCGTGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGAT
TCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAAC
TGAAAGAGGAAGGTCTCGGAATCACGAAAGCTTCTATTCCTGTAGTTGGTTCCCCGGCCGATCTTCCTTATTACTATGTTCCATCACAACATCCAGTGAGTGCTACAGGG
ATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACAGCTCAACAGCCCCGACCACCGATACCTTTCATGCCATGGCCGCATACTCAAGCTCAGCAGCA
GCAGCAACAACAACAAACTCAGCAGCAAAGTGACGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCCCAGCAGGCTGCAGGCGGTGTTGGTGCAGGACAATTACCATATTCTAATCCTTACCAAACAGCTCCAATGGG
GGCGTCCGGAACGCCTGCTATTACGATTCCCCCGACTCAGCAACCATCCAGTTTCTCCAACTCTCCACACCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCAGCAGC
AGCAGCAACAACAGCAACAACAGCTCCAAGTGTTCTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTTGCTCGAATCAAG
AAAATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCGCCAGTTATATTTGCAAAGGCGTGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGAT
TCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAAC
TGAAAGAGGAAGGTCTCGGAATCACGAAAGCTTCTATTCCTGTAGTTGGTTCCCCGGCCGATCTTCCTTATTACTATGTTCCATCACAACATCCAGTGAGTGCTACAGGG
ATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACAGCTCAACAGCCCCGACCACCGATACCTTTCATGCCATGGCCGCATACTCAAGCTCAGCAGCA
GCAGCAACAACAACAAACTCAGCAGCAAAGTGACGCATAG
Protein sequenceShow/hide protein sequence
MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIK
KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATG
MIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA