; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24007 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24007
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationCarg_Chr11:9928980..9929312
RNA-Seq ExpressionCarg24007
SyntenyCarg24007
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571715.1 hypothetical protein SDJN03_28443, partial [Cucurbita argyrosperma subsp. sororia]7.9e-2570.75Show/hide
Query:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER
        M+GRGGE  GE +GRGG+ +GG+LGRGGEAVGG LGRGG+AVGG +GRGGEA+GGMLGRGG++ G M GRGG+AIGGMLGRGG+A G   GRGG+A+G  
Subjt:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER

Query:  SGRGAK
         GRG K
Subjt:  SGRGAK

KAG7011439.1 hypothetical protein SDJN02_26344, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-2570.75Show/hide
Query:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER
        M+GRGGE  GE +GRGG+ +GG+LGRGGEAVGG LGRGG+AVGG +GRGGEA+GGMLGRGG++ G M GRGG+AIGGMLGRGG+A G   GRGG+A+G  
Subjt:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER

Query:  SGRGAK
         GRG K
Subjt:  SGRGAK

KAG7022577.1 hypothetical protein SDJN02_16311, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-46100Show/hide
Query:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER
        MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER
Subjt:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER

Query:  SGRGAKPQVE
        SGRGAKPQVE
Subjt:  SGRGAKPQVE

TYK13397.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa]4.4e-2368.87Show/hide
Query:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER
        M+GRGGEA GE +GRGG  +G ILGRGGEA+G  LGRGGEA+G ILGRGGEA+G +LGRGGE  G + GRGG+AIG ++GRGGEA G I GRGGKA+GE 
Subjt:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER

Query:  SGRGAK
         GRG +
Subjt:  SGRGAK

XP_016900727.1 PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo]1.8e-2166.67Show/hide
Query:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIF----GRGGKA
        ++GRGGEA GE LGRGGK +G ILGRGGEA+G  +GRGG+ +G I GRGGEA+G + GRGGE  G + GRGGKAIG +LGRGGEA G IF    GRGGKA
Subjt:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIF----GRGGKA

Query:  VGERSGRG
        +GE  GRG
Subjt:  VGERSGRG

TrEMBL top hitse value%identityAlignment
A0A0A0KHS4 Pollen coat oleosin-glycine rich protein2.6e-2164.76Show/hide
Query:  MGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGERS
        MGRGG+A GE  GRGG+ +G ILGRGGE +G T+GRGG+A+G I GRGG A+G MLGRGGE  G   GRGGKAIG + GRGG A G I GRGG+ +GE  
Subjt:  MGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGERS

Query:  GRGAK
        GRG K
Subjt:  GRGAK

A0A1S4DXM4 glycine-rich cell wall structural protein 1-like8.9e-2266.67Show/hide
Query:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIF----GRGGKA
        ++GRGGEA GE LGRGGK +G ILGRGGEA+G  +GRGG+ +G I GRGGEA+G + GRGGE  G + GRGGKAIG +LGRGGEA G IF    GRGGKA
Subjt:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIF----GRGGKA

Query:  VGERSGRG
        +GE  GRG
Subjt:  VGERSGRG

A0A5A7UQF2 Glycine-rich cell wall structural protein 1.8-like1.4e-1462.38Show/hide
Query:  RGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGERSGR
        RGG+  GE  GRG KT+G   GRG EA+G  LGR GEA+G I GRGGEA+G +LGR GE  G + GRGG+A+G M+GRGGEA G I GRGG A+GE  GR
Subjt:  RGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGERSGR

Query:  G
        G
Subjt:  G

A0A5D3BMR9 Glycine-rich cell wall structural protein 1-like4.1e-1969.57Show/hide
Query:  GEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGERS
        GE LGRGGK +G ILGRGGEA+G  +GRGG+ +G I GRGGEA+G + GRGGE  G + GRGGKAIG +LGRGGEA G IFGRGGKA GE S
Subjt:  GEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGERS

A0A5D3CNE0 Glycine-rich cell wall structural protein 1.8-like2.1e-2368.87Show/hide
Query:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER
        M+GRGGEA GE +GRGG  +G ILGRGGEA+G  LGRGGEA+G ILGRGGEA+G +LGRGGE  G + GRGG+AIG ++GRGGEA G I GRGGKA+GE 
Subjt:  MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGER

Query:  SGRGAK
         GRG +
Subjt:  SGRGAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGGCGAGGTGGAGAAGCAAATGGTGAAAAGTTGGGACGAGGTGGCAAAACAGTTGGTGGAATACTAGGGCGAGGTGGAGAAGCAGTTGGAGGAACGTTGGGACG
AGGCGGGGAAGCAGTTGGTGGAATATTGGGACGAGGTGGTGAAGCAGTTGGTGGAATGTTAGGACGAGGGGGAGAAGTAGCTGGTGGAATGTTCGGACGAGGTGGCAAAG
CAATTGGTGGAATGCTTGGACGAGGTGGAGAAGCTACTGGTATAATATTTGGACGAGGTGGCAAAGCAGTTGGTGAAAGGTCAGGGAGGGGAGCGAAACCACAGGTGGAA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGGCGAGGTGGAGAAGCAAATGGTGAAAAGTTGGGACGAGGTGGCAAAACAGTTGGTGGAATACTAGGGCGAGGTGGAGAAGCAGTTGGAGGAACGTTGGGACG
AGGCGGGGAAGCAGTTGGTGGAATATTGGGACGAGGTGGTGAAGCAGTTGGTGGAATGTTAGGACGAGGGGGAGAAGTAGCTGGTGGAATGTTCGGACGAGGTGGCAAAG
CAATTGGTGGAATGCTTGGACGAGGTGGAGAAGCTACTGGTATAATATTTGGACGAGGTGGCAAAGCAGTTGGTGAAAGGTCAGGGAGGGGAGCGAAACCACAGGTGGAA
TAA
Protein sequenceShow/hide protein sequence
MMGRGGEANGEKLGRGGKTVGGILGRGGEAVGGTLGRGGEAVGGILGRGGEAVGGMLGRGGEVAGGMFGRGGKAIGGMLGRGGEATGIIFGRGGKAVGERSGRGAKPQVE