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Carg24019 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24019
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCOP9 signalosome complex subunit 8-like
Genome locationCarg_Chr11:10092236..10094217
RNA-Seq ExpressionCarg24019
SyntenyCarg24019
Gene Ontology termsGO:0000338 - protein deneddylation (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0009753 - response to jasmonic acid (biological process)
GO:0010387 - COP9 signalosome assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008180 - COP9 signalosome (cellular component)
InterPro domainsIPR033205 - COP9 signalosome, subunit CSN8
IPR033464 - CSN8/PSMD8/EIF3K


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588823.1 COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3798.8Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
KAG7022588.1 COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-46100Show/hide
Query:  MNIKHQYKLCFHAADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        MNIKHQYKLCFHAADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
Subjt:  MNIKHQYKLCFHAADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
XP_022927899.1 COP9 signalosome complex subunit 8-like [Cucurbita moschata]2.7e-3797.59Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEY+FHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
XP_022989724.1 COP9 signalosome complex subunit 8-like [Cucurbita maxima]5.1e-3696.39Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVT QGWIVDVASQMFTVKKQQI TEQKLDSSKLQRLTEYVFHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
XP_023531250.1 COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]6.0e-3797.59Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQI TEQKLDSSKLQRLTEYVFHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
TrEMBL top hitse value%identityAlignment
A0A6J1DU53 COP9 signalosome complex subunit 82.6e-3387.95Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLYR+RMFQLLVSAYST+SIHDTAHFLGM+EEEAKNYVT +GWIVD+ASQM TVKKQQI +EQKLDSSKLQRLTEYVFHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
A0A6J1EJA8 COP9 signalosome complex subunit 8-like1.3e-3797.59Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEY+FHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
A0A6J1HJJ3 COP9 signalosome complex subunit 8-like6.3e-3286.75Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLYR+RMFQLLVSAYSTISIHD AHFLGMN EEAKNYVT +GWIVDVAS+M TVKKQ+I  EQKLDSSKLQRLTEYVFHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
A0A6J1HVB2 COP9 signalosome complex subunit 8-like2.8e-3286.75Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLYR+RMFQLLVSAYSTISIHD AHFLGMNEEE KNYVT +GWIVDVAS+M TVKKQ+I  EQKLDSSKLQRLTEYVFHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
A0A6J1JQ49 COP9 signalosome complex subunit 8-like2.5e-3696.39Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVT QGWIVDVASQMFTVKKQQI TEQKLDSSKLQRLTEYVFHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
SwissProt top hitse value%identityAlignment
P43255 COP9 signalosome complex subunit 83.4e-2772.29Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLY KRMFQLL+SAYSTI+IHD A FLGM E++A  YV   GW VD ASQM +VKKQ +  EQK+DSSKLQRLTEYVFHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
Q6GQA6 COP9 signalosome complex subunit 89.8e-0639.76Show/hide
Query:  DLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKL-DSSKLQRLTEYVFHLEH
        D  ++R F L+  AY++IS  D A F+G+  EEA   V  QGW  D A+ M   KK   A    + +  +L RLT+YV  LE+
Subjt:  DLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKL-DSSKLQRLTEYVFHLEH
Q6P637 COP9 signalosome complex subunit 82.3e-0740.96Show/hide
Query:  DLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKL-DSSKLQRLTEYVFHLEH
        D  R+R F L+  AY++IS  D A F+G++ EEA   V  QGW  D+A++M   KK   A    + +  +L RLT+YV  LE+
Subjt:  DLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKL-DSSKLQRLTEYVFHLEH
Q75K24 COP9 signalosome complex subunit 81.1e-0431.25Show/hide
Query:  YRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQ-MFTVKKQQIATEQKLDSSKLQRLTEYVFHLE
        +++R F+L+ +AYS+I+++D + +LG++ E+   + T + W  D AS  +  V  Q+ ++E    + +++ LT YV  LE
Subjt:  YRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQ-MFTVKKQQIATEQKLDSSKLQRLTEYVFHLE
Q7ZUZ0 COP9 signalosome complex subunit 84.1e-0435Show/hide
Query:  RKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKL-DSSKLQRLTEYVFHLEH
        R+R + L+  AY++IS  D A F+G + EEA   V   GW  D  ++M   +K        + +  +L RLT+YV  LE+
Subjt:  RKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKL-DSSKLQRLTEYVFHLEH
Arabidopsis top hitse value%identityAlignment
AT4G14110.1 COP9 signalosome, subunit CSN82.4e-2872.29Show/hide
Query:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH
        +DLY KRMFQLL+SAYSTI+IHD A FLGM E++A  YV   GW VD ASQM +VKKQ +  EQK+DSSKLQRLTEYVFHLEH
Subjt:  ADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTAAACATCAATATAAGCTTTGTTTTCATGCTGCAGATCTTTACAGAAAAAGAATGTTTCAGTTGCTGGTGTCTGCTTATTCTACAATAAGTATCCATGATAC
AGCTCACTTCTTGGGAATGAATGAGGAAGAAGCCAAAAATTATGTAACACCGCAAGGATGGATTGTTGATGTTGCTTCTCAAATGTTCACTGTGAAGAAACAACAAATCG
CGACGGAGCAGAAGTTAGATTCCAGCAAATTGCAGCGCTTGACCGAATACGTTTTCCATCTCGAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATATTAAACATCAATATAAGCTTTGTTTTCATGCTGCAGATCTTTACAGAAAAAGAATGTTTCAGTTGCTGGTGTCTGCTTATTCTACAATAAGTATCCATGATAC
AGCTCACTTCTTGGGAATGAATGAGGAAGAAGCCAAAAATTATGTAACACCGCAAGGATGGATTGTTGATGTTGCTTCTCAAATGTTCACTGTGAAGAAACAACAAATCG
CGACGGAGCAGAAGTTAGATTCCAGCAAATTGCAGCGCTTGACCGAATACGTTTTCCATCTCGAACATTGA
Protein sequenceShow/hide protein sequence
MNIKHQYKLCFHAADLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH