| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 4.7e-282 | 100 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_022947612.1 RNA polymerase sigma factor sigA-like [Cucurbita moschata] | 8.4e-279 | 99.02 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWL+NTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ KPSISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEIS AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_023006851.1 RNA polymerase sigma factor sigA-like [Cucurbita maxima] | 2.9e-279 | 99.02 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTK VVIAKHSADFSPSY PSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKP+ISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRC+PSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 2.0e-280 | 99.41 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVF+AQPKISKQLKPSISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 4.0e-265 | 94.5 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL-NDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY+ NDHRLGQ QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL-NDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKG
Query: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 3.8e-261 | 93.32 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRH-VQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRH-VQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKG
Query: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEEHKTRLKERL CEPSE+QLAISL+ISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 3.8e-261 | 93.32 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRH-VQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRH-VQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKG
Query: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEEHKTRLKERL CEPSE+QLAISL+ISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 1.4e-255 | 90.94 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LY NDHRLGQ+QVS TKSVVIAK SA+FSPS+P SNRH QCIKAVKEHVDTPSSPT EPWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T+KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQL+ +ISPELLQ RL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+ISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1G739 RNA polymerase sigma factor sigA-like | 4.1e-279 | 99.02 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWL+NTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ KPSISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEIS AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 1.4e-279 | 99.02 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTK VVIAKHSADFSPSY PSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKP+ISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRC+PSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
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| O24629 RNA polymerase sigma factor sigA | 1.4e-191 | 69.77 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L +NDH Q +++TKS + AK ++++SPS+P SNRH Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV ++S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNR
Query: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
+RGYVKG++SE++L H EVVRLSKKIK GL L++HK+RLK+RL CEPS+EQLA+SL+ISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPSIDRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D +LK EV+KLI+ TL +RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKMRKMEAMLLKH
K AA+ RKMEAM+LK+
Subjt: KKAAKMRKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 2.5e-39 | 33.74 | Show/hide |
Query: SKQLKPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRL
S++ S ++ +R Y++ + +L E + L++KI L LE + RL E+L +P + + A ++++ R R+ A++K+ SN+RL
Subjt: SKQLKPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRL
Query: VMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSIDRIAES
V+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ + IA
Subjt: VMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSIDRIAES
Query: LNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDN-ECLTW
+ M+ +K+ K+A IS + +E L GET ++ N L ++ K+++ +L RER+++RL +GLD+ T
Subjt: LNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDN-ECLTW
Query: EEISKRIGLSRERVRQVGLVALEKLK
EEI + ++RER+RQ+ AL KL+
Subjt: EEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 8.4e-40 | 34.78 | Show/hide |
Query: KPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSI
K + ++ +R Y++ + +L E + L+++I LALE + L E+L PS+ + A +++ E R R+ A++K+ SN+RLV+SI
Subjt: KPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSI
Query: AQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSIDRIAESLNMS
A++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ + IA + M+
Subjt: AQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSIDRIAESLNMS
Query: KKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDN-ECLTWEEIS
+K+ K+A IS + +E L GET +A N L E + + TL RER+++RL +GLD+ T EEI
Subjt: KKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDN-ECLTWEEIS
Query: KRIGLSRERVRQVGLVALEKLK
+ ++RER+RQ+ AL KL+
Subjt: KRIGLSRERVRQVGLVALEKLK
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| Q03065 RNA polymerase sigma-B factor | 1.0e-37 | 32.42 | Show/hide |
Query: ILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
+L H + + +++++ + + K L E+L+ EP+ ++ A +++ L ++ + +A++K+ +N+RLV+SIA++Y E DL+Q G +GL R
Subjt: ILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
Query: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
G+EKFD + G+K STY YWWIRQG++RA+ + SRT+RLP H+ ++L I+ + +L +K G + IA++LN+ +++ + + + SLD
Subjt: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
Query: LNGLPGETH-HSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
G +T + D+ + +P + L +++ L+ L +++E++ L GL C LT +IS+R+G+SRERVRQV AL L++
Subjt: LNGLPGETH-HSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
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| Q0J7T6 RNA polymerase sigma factor sigA | 1.8e-130 | 51.04 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL---------------NDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVD-----
M AT A+IGL A RLL++S +D + L + +T K +A H SP + Q ++A++ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL---------------NDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVD-----
Query: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTEK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQP
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ + T K V V S VSARQRRMS +R+ ++K
Subjt: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTEK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQP
Query: KISKQLKPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNV
+ ++SPEL+Q+R R Y++G VS+E+L H +VV LS KIK G+ L++ +++LKE+L EPS +QLA SL+IS ELRSR+ E LARE L MSN+
Subjt: KISKQLKPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNV
Query: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAE
RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK +L+++GI P+I+ IA
Subjt: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKMRKMEAML
GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: GLSRERVRQVGLVALEKLKKAAKMRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.3e-35 | 31.9 | Show/hide |
Query: EKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKI----SKQLKPSISPELLQNRLRGYVKGLV-SEEILPHSEVVRLSKKIKVGLALEEHKTRLKERL
E++ V+ + S RQ ++R + P + S + K ++ E+ N Y++ S ++L E LS I+ L LE +T L ER
Subjt: EKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKI----SKQLKPSISPELLQNRLRGYVKGLV-SEEILPHSEVVRLSKKIKVGLALEEHKTRLKERL
Query: RCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
+P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L +
Subjt: RCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
Query: NSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSL
SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD + + +
Subjt: NSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSL
Query: KIEVNKLINMTLEDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLL
+ +++K+++ +L RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: KIEVNKLINMTLEDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLL
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| AT1G64860.1 sigma factor A | 9.8e-193 | 69.77 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L +NDH Q +++TKS + AK ++++SPS+P SNRH Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV ++S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNR
Query: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
+RGYVKG++SE++L H EVVRLSKKIK GL L++HK+RLK+RL CEPS+EQLA+SL+ISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPSIDRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D +LK EV+KLI+ TL +RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKMRKMEAMLLKH
K AA+ RKMEAM+LK+
Subjt: KKAAKMRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 2.3e-178 | 68.67 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L +NDH Q +++TKS + AK ++++SPS+P SNRH Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKSVVIAKHSADFSPSYPPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV ++S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNR
Query: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
+RGYVKG++SE++L H EVVRLSKKIK GL L++HK+RLK+RL CEPS+EQLA+SL+ISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPSIDRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRI
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D +LK EV+KLI+ TL +RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.1e-33 | 30.23 | Show/hide |
Query: ARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISR
A+ RR + + + K+ K + + L+ ++ G ++++L E L I+ L LE+ KT+L+ + CEP+ + A ++ IS
Subjt: ARQRRMSSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISR
Query: AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGL
L+S + +REKL +N+RLV+ IA++Y N G DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG
Subjt: AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGL
Query: IRNA-KVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDRER
+ A K +QE PS + +A + +S +K+ S+ + + + T D+ +E P ++ V L+N+ L +ER
Subjt: IRNA-KVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDRER
Query: EIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKK
II+L G+D + + EI + GLS+ERVRQ+ AL +LK+
Subjt: EIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKK
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| AT5G13730.1 sigma factor 4 | 4.6e-33 | 32 | Show/hide |
Query: SSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSR
S KR+ + + + ++ + + + E + V G L E V+L +K G LE T ++E E +++ L R + +
Subjt: SSKRKIQSKHVFMAQPKISKQLKPSISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLKERLRCEPSEEQLAISLEISRAELRSR
Query: VMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E +
Subjt: VMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
Query: NAKVKLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREI
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L RE +
Subjt: NAKVKLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWSLKIEVNKLINMTLEDREREI
Query: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKME
+ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+ + ++
Subjt: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKME
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