; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24039 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24039
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionbinding partner of ACD11 1-like
Genome locationCarg_Chr02:2176962..2178801
RNA-Seq ExpressionCarg24039
SyntenyCarg24039
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035145.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-128100Show/hide
Query:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT
        MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT
Subjt:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT

Query:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
        APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
Subjt:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_022947210.1 binding partner of ACD11 1-like [Cucurbita moschata]2.9e-11894.59Show/hide
Query:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT
        MASQVRTVRVTN+SLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLS           GATIVDQPVSIASAPDYSLPAVPA+
Subjt:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT

Query:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
        APLPVSSPSAENA SGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
Subjt:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_023007523.1 binding partner of ACD11 1-like [Cucurbita maxima]5.1e-11592.28Show/hide
Query:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT
        MASQVRTVRVTN+SLSASEKDLRDFFSFSGEIE VEMRKDNERSQIAFVTFKD KGAETSILLS           GATIVDQPVSIA+APDY+LPAVPA+
Subjt:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT

Query:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
        APLPVSSPSAENA SGTAGSAM KAEDVVSSMLAKGFTLGKD LNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
Subjt:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_023533747.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo]4.2e-11793.82Show/hide
Query:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT
        MASQVRTVRVTN+SLSASEKDLRDFFSFSGEIE VEMRKDNERSQIAFVTFKDPKGAETSILLS           GATIVDQPVSIASAPDYSLPAVPA+
Subjt:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT

Query:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
        APLPVSSPSAENA SGTAGSAM KAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
Subjt:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_038900618.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.3e-9780.31Show/hide
Query:  VRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAP--
        +RTVRVTN+SLS +EKDLRDFFSFSGEIE VEMRKD ERSQ+AFVTFKDPKGAETSILLS           GATIVDQPVSIASAPDY+LPAV A+AP  
Subjt:  VRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAP--

Query:  LPVSSPSAENADSG--TAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
        +PVS+P+ +N +SG  TAGSAM KAEDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEK
Subjt:  LPVSSPSAENADSG--TAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        TKAAV+NAG+A+M NRYV TGASWV+QTFQRVAKAAV+VS KTKEKVL EDQ K  G S
Subjt:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein4.9e-9579.62Show/hide
Query:  RTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAP--L
        RTVRVTN+SLSA+EKDLRDFFSFSGEIE VEMR DNERSQ+AFVTFKD KGAETSILLS           GATIVDQPVSI+SAPDY+LPAV A+AP  +
Subjt:  RTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAP--L

Query:  PVSSPSAENADS---GTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
        PVS+P+ +N  S    TAGSAM KAEDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEK
Subjt:  PVSSPSAENADS---GTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS
        TKAAV+NAG+A+M NRYV TGASWV+QTFQRVAKAAV+VS KTKEKVLA EDQ K  G S
Subjt:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS

A0A5A7TN24 Binding partner of ACD11 1-like isoform X11.3e-9580.31Show/hide
Query:  RTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAP--L
        RTVRVTN+SLSA+EKDLRDFFSFSGEIE VEMR DNERSQ+AFVTFKDPKGAETSILLS           GATIVDQPVSI+SAPDY+LPAV A+AP  +
Subjt:  RTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAP--L

Query:  PVSSPSAENADS--GTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKT
        PVS+P+ +N  S   TAGSA+ K EDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKT
Subjt:  PVSSPSAENADS--GTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKT

Query:  KAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS
        KAAV+NAG+ALMANRYV TGASWV+QTFQRVAKAAV+VS KTKEKVLA EDQ K  G S
Subjt:  KAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS

A0A6J1G681 binding partner of ACD11 1-like1.4e-11894.59Show/hide
Query:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT
        MASQVRTVRVTN+SLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLS           GATIVDQPVSIASAPDYSLPAVPA+
Subjt:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT

Query:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
        APLPVSSPSAENA SGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
Subjt:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

A0A6J1JGG3 binding partner of ACD11 1-like isoform X23.5e-9375.95Show/hide
Query:  VRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLP
        +RTVRVTN+SL A+EK+LR+FFSFSGEIE VEMRKDNE+ Q+AFVTFKDPKGAETSILLS           GATIVDQP+SI SAPDY+LPAV A+ P  
Subjt:  VRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLP

Query:  VSSPSAEN---------ADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKF
         S+P+AEN           +GT GSAM KAEDVVSSMLAKGF LGKDALNRAKSFD++HQLT TASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKF
Subjt:  VSSPSAEN---------ADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKF

Query:  QVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEG
        QVSEKTKAAVNNAG+A+M NRYVSTGASWV+QTFQRVAKAAV+VS KTKEK+LAEDQ  + G
Subjt:  QVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEG

A0A6J1L7W4 binding partner of ACD11 1-like2.5e-11592.28Show/hide
Query:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT
        MASQVRTVRVTN+SLSASEKDLRDFFSFSGEIE VEMRKDNERSQIAFVTFKD KGAETSILLS           GATIVDQPVSIA+APDY+LPAVPA+
Subjt:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT

Query:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
        APLPVSSPSAENA SGTAGSAM KAEDVVSSMLAKGFTLGKD LNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
Subjt:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.7e-0426Show/hide
Query:  VRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLPVSS
        V VTN+S   +EK + DFFSF G++  +   K  E +Q A + F+ P   +T++LL             A +    + I S                   
Subjt:  VRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLPVSS

Query:  PSAENADSGTAGSAMNKAED------VVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTV-VNEKVKEMDEKFQVSEK
         +A   D G AG      ++      ++S +L++G+ L    L ++   DQ + ++S     + S      LS   SV     V EK  E+D KF +S+K
Subjt:  PSAENADSGTAGSAMNKAED------VVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTV-VNEKVKEMDEKFQVSEK

Q9LFD5 Binding partner of ACD11 16.0e-5853.64Show/hide
Query:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT
        MASQVR+V+V NLS  A+E D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLS           GA+I DQ V I  AP+YS PA    
Subjt:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT

Query:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
              +P AE   SG A S + KAEDVVSSMLAKGF LGKDA+ +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+
Subjt:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKA-------AVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        TK+        V++AG+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  TKA-------AVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.4e-6253.88Show/hide
Query:  TVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLPVS
        TV+V+N+SL A+++DL++FFSFSG+I  +E + + ER+++A+VTFKD +GAET++LLS           GATIVD  V ++ APDY L    +   L   
Subjt:  TVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLPVS

Query:  SPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA--
         P   N       S + KAEDVVSSMLAKGF LGKDA+ +AKS D+KHQLTSTAS+KV S D+KIG ++KI+ GT VV EKV+E+D+K+QVSEKTK+A  
Subjt:  SPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA--

Query:  -----VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE
             V+NAG+A+M NRYV TGA+WVT  F +VAKAA EV  K KEKV +AE++ K++
Subjt:  -----VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE

AT5G16840.1 binding partner of acd11 14.2e-5953.64Show/hide
Query:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT
        MASQVR+V+V NLS  A+E D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLS           GA+I DQ V I  AP+YS PA    
Subjt:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT

Query:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
              +P AE   SG A S + KAEDVVSSMLAKGF LGKDA+ +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+
Subjt:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKA-------AVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        TK+        V++AG+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  TKA-------AVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

AT5G16840.2 binding partner of acd11 12.3e-6053.64Show/hide
Query:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT
        MASQVR+V+V NLS  A+E D+++FFSFSGE+E ++++  NE S  A+VTFK+ +GAET++LLS           GA+I DQ V I  AP+YS PA    
Subjt:  MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPAT

Query:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
              +P AE   SG A S + KAEDVVSSMLAKGF LGKDA+ +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+
Subjt:  APLPVSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKA-------AVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        TK+        V++AG+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  TKA-------AVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

AT5G16840.3 binding partner of acd11 15.2e-5752.92Show/hide
Query:  VRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLP
        VR+V+V NLS  A+E D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLS           GA+I DQ V I  AP+YS PA        
Subjt:  VRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLP

Query:  VSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-
          +P AE   SG A S + KAEDVVSSMLAKGF LGKDA+ +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+ 
Subjt:  VSSPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-

Query:  ------AVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
               V++AG+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  ------AVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.5e-6151.55Show/hide
Query:  TVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLPVS
        TV+V+N+SL A+E+DL++FFSFSG+I  +E + +N+ S++A+VTFKD +GAET++LL+           G+TIVD  V++  +PDY LP     +   + 
Subjt:  TVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLPVS

Query:  SPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA--
          +  ++ +    S   KAEDVVS M++KGF LGKDA+ +AKS D+KHQLTSTAS++V S D++IG +EKI+ GTTVV+EKVKE+D+KFQV+EKTK+A  
Subjt:  SPSAENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA--

Query:  -----VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE
             V+NAG+A+M NRYV TGA+WVT  F RV+KAA EV  K KEKV LAE++ +++
Subjt:  -----VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCAGGTGAGAACGGTGAGAGTTACCAATCTCTCGTTGAGCGCGTCGGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAAATTGTCGAAAT
GCGAAAGGACAATGAACGATCTCAAATTGCATTTGTTACCTTCAAGGATCCGAAAGGAGCCGAGACATCGATTCTACTCTCAGTTGATACAATTCTCCCTTTCTTCATTT
CAATTGGAGCTACAATTGTTGATCAGCCTGTTAGCATTGCTTCTGCTCCAGATTACAGTCTTCCTGCTGTACCTGCCACTGCCCCTCTACCAGTGTCTTCTCCATCTGCA
GAGAATGCAGACTCTGGTACTGCTGGATCTGCAATGAATAAGGCCGAGGATGTTGTGAGCAGCATGCTGGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTCAATAGGGC
AAAGTCTTTTGACCAGAAGCACCAATTGACATCAACAGCCTCATCAAAAGTCCTTTCTCTGGACCAAAAGATTGGCCTTAGCGAGAAGATTAGTGTTGGCACGACAGTGG
TGAATGAGAAAGTGAAAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAAACCAAGGCAGCAGTGAACAATGCAGGAACAGCCTTAATGGCTAACCGGTACGTCTCAACC
GGGGCTTCCTGGGTTACGCAGACGTTTCAAAGAGTCGCAAAAGCGGCCGTAGAAGTCAGTCACAAAACAAAGGAGAAGGTTTTAGCTGAGGATCAAGCGAAACAAGAGGG
AAGATCTTGA
mRNA sequenceShow/hide mRNA sequence
AACCTAAACAACCGCCAAGCCACAACGCACCTCTCAAGGTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGAACTTGGATTTGGAACTTCTCCGGTGGAT
CAGACGGAGCAGCATGGCGTCGCAGGTGAGAACGGTGAGAGTTACCAATCTCTCGTTGAGCGCGTCGGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTG
AAATTGTCGAAATGCGAAAGGACAATGAACGATCTCAAATTGCATTTGTTACCTTCAAGGATCCGAAAGGAGCCGAGACATCGATTCTACTCTCAGTTGATACAATTCTC
CCTTTCTTCATTTCAATTGGAGCTACAATTGTTGATCAGCCTGTTAGCATTGCTTCTGCTCCAGATTACAGTCTTCCTGCTGTACCTGCCACTGCCCCTCTACCAGTGTC
TTCTCCATCTGCAGAGAATGCAGACTCTGGTACTGCTGGATCTGCAATGAATAAGGCCGAGGATGTTGTGAGCAGCATGCTGGCCAAAGGCTTCACTTTGGGCAAAGATG
CCCTCAATAGGGCAAAGTCTTTTGACCAGAAGCACCAATTGACATCAACAGCCTCATCAAAAGTCCTTTCTCTGGACCAAAAGATTGGCCTTAGCGAGAAGATTAGTGTT
GGCACGACAGTGGTGAATGAGAAAGTGAAAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAAACCAAGGCAGCAGTGAACAATGCAGGAACAGCCTTAATGGCTAACCG
GTACGTCTCAACCGGGGCTTCCTGGGTTACGCAGACGTTTCAAAGAGTCGCAAAAGCGGCCGTAGAAGTCAGTCACAAAACAAAGGAGAAGGTTTTAGCTGAGGATCAAG
CGAAACAAGAGGGAAGATCTTGA
Protein sequenceShow/hide protein sequence
MASQVRTVRVTNLSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSVDTILPFFISIGATIVDQPVSIASAPDYSLPAVPATAPLPVSSPSA
ENADSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTALMANRYVST
GASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS