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Carg24053 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24053
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Genome locationCarg_Chr02:2062729..2068325
RNA-Seq ExpressionCarg24053
SyntenyCarg24053
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010970.1 hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-6985.9Show/hide
Query:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR
        MAACF+PSLS+SGGLIKASDLSSKSISFG APKL++Q KC +TNHKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAPQIRRS+LNE+EYGF+R
Subjt:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TP+VPVEADPE+EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

XP_022948116.1 uncharacterized protein LOC111451792 [Cucurbita moschata]7.2e-80100Show/hide
Query:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
        MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
Subjt:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
        KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF

XP_023007535.1 uncharacterized protein LOC111499995 [Cucurbita maxima]3.9e-7898.72Show/hide
Query:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
        MAA FSPSLS+SGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
Subjt:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
        KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF

XP_023512433.1 uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]4.4e-6986.54Show/hide
Query:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR
        MAACF+PSLS+SGGLIKASDLSSKSISFG  PKL++Q KC +TNHKLSVRAEYNDGGRSGGG+FVAGFLLGGAVFGTLAY+FAPQIRRS+LNE+EYGF+R
Subjt:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TPAVPVEADPE+EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

XP_023534610.1 uncharacterized protein LOC111796133 [Cucurbita pepo subsp. pepo]7.9e-7998.72Show/hide
Query:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
        MAACF+PSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
Subjt:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
        KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTP VPVEADPEVEATF
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF

TrEMBL top hitse value%identityAlignment
A0A6J1D647 uncharacterized protein LOC1110172731.8e-6888.46Show/hide
Query:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR
        MAACF+PSLS+SGGLIKASDLSSKSI+FG APKL++Q KC +TN KLSVRAEYND GR GGGDFVAGFLLGGAVFGTLAY+FAPQIRRSLLNE+EYGF+R
Subjt:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        AKRPIYYDEGLEKTR+TLNAKIGQLNSAIDNVSSRLRGG NTPAVPVEADPE EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

A0A6J1FVP6 uncharacterized protein LOC1114488976.1e-6985.9Show/hide
Query:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR
        MAACF+PSLS+SGGLIKASDLSSKSISFG APKL++Q KC +T+HKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAPQIRRS+LNE+EYGF+R
Subjt:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TPAVPVEADPE+EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

A0A6J1G8D5 uncharacterized protein LOC1114517923.5e-80100Show/hide
Query:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
        MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
Subjt:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
        KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF

A0A6J1JGK4 uncharacterized protein LOC1114843141.0e-6885.9Show/hide
Query:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR
        MAAC +PSLS+SGGLIKASDLSSKSISFG APKL++Q KC ++NHKLSVRAEYNDGGRSGGG+FVAGFLLGGAVFGTLAY+FAPQIRRS+LNE+EYGF+R
Subjt:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TPAVPVEADPE+EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

A0A6J1L384 uncharacterized protein LOC1114999951.9e-7898.72Show/hide
Query:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
        MAA FSPSLS+SGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
Subjt:  MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
        KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.9.2e-1739.05Show/hide
Query:  MAACFSPSLSL---------SGGLIKASDLSSKSISFG--HAPKLSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRS
        MA+  S SLSL         S G     +    S+SFG  H+ KL +    +T   L++++ Y D   SG  G FV GF+LGG + G L  V+APQI ++
Subjt:  MAACFSPSLSL---------SGGLIKASDLSSKSISFG--HAPKLSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRS

Query:  LLNENEYGFKRAKRPIYYDE--GLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        +   +     R      YDE   LEKTR+ L  KI QLNSAID+VSS+L+  ++TP     +  E+EAT
Subjt:  LLNENEYGFKRAKRPIYYDE--GLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

AT3G02900.1 unknown protein7.7e-4066.92Show/hide
Query:  LSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVS
        L+VQ     +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAY+FAPQIRRS+L+ENEYGFK+ ++P+YYDEGLE+ RE LN KIGQLNSAID VS
Subjt:  LSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVS

Query:  SRLRGG-----KNT--PAVPVEADPEVEAT
        SRL+GG     KNT  P+VPVE D E EAT
Subjt:  SRLRGG-----KNT--PAVPVEADPEVEAT

AT3G02900.2 unknown protein7.7e-4066.92Show/hide
Query:  LSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVS
        L+VQ     +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAY+FAPQIRRS+L+ENEYGFK+ ++P+YYDEGLE+ RE LN KIGQLNSAID VS
Subjt:  LSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVS

Query:  SRLRGG-----KNT--PAVPVEADPEVEAT
        SRL+GG     KNT  P+VPVE D E EAT
Subjt:  SRLRGG-----KNT--PAVPVEADPEVEAT

AT5G16660.1 unknown protein1.3e-4262.87Show/hide
Query:  MAACFSPS-LSLSG----GLIKASDLS--SKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLN-
        MA+C + + LSLSG      +KA+ LS  +K  S      L++ K      K SV A Y DG RSG  GDF+AGFLLGGAVFG +AY+FAPQIRRS+LN 
Subjt:  MAACFSPS-LSLSG----GLIKASDLS--SKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLN-

Query:  ENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEADPEVEAT
        E+EYGF++ K+P YYDEGLEKTRETLN KIGQLNSAIDNVSSRLRG  KNT +  VPVE DPEVEAT
Subjt:  ENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEADPEVEAT

AT5G16660.2 unknown protein2.0e-4062.28Show/hide
Query:  MAACFSPS-LSLSG----GLIKASDLS--SKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLN-
        MA+C + + LSLSG      +KA+ LS  +K  S      L++ K      K SV A   DG RSG  GDF+AGFLLGGAVFG +AY+FAPQIRRS+LN 
Subjt:  MAACFSPS-LSLSG----GLIKASDLS--SKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLN-

Query:  ENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEADPEVEAT
        E+EYGF++ K+P YYDEGLEKTRETLN KIGQLNSAIDNVSSRLRG  KNT +  VPVE DPEVEAT
Subjt:  ENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEADPEVEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTGCTTTTCTCCCTCGCTGTCCCTGTCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCTAAGTCCATTTCCTTTGGGCATGCACCAAAACTCTCAGTTCA
GAAGTGCTTCAAAACCAACCACAAGTTATCAGTACGTGCTGAGTACAATGATGGTGGTAGAAGTGGAGGTGGGGATTTTGTTGCTGGGTTTCTTCTTGGGGGTGCTGTAT
TTGGAACATTAGCTTATGTTTTCGCACCGCAGATCAGGAGATCTCTTCTAAATGAAAATGAGTATGGTTTTAAGAGGGCAAAGCGTCCAATCTACTACGATGAAGGTTTA
GAGAAAACCAGAGAGACGTTGAATGCAAAAATAGGCCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAAGAACACTCCAGCTGTGCCAGTTGA
AGCTGATCCTGAGGTTGAAGCTACCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATTATCTCCAACACTCTCTCCTGTTCCTTCTTCTTCCTCTCTCTCTCTAGATCTCTACCCTTCTTCCAACCACATGGCTGCCTGCTTTTCTCCCTCGCTGTCCCTGTCTG
GGGGATTGATCAAGGCCTCAGATCTCTCCTCTAAGTCCATTTCCTTTGGGCATGCACCAAAACTCTCAGTTCAGAAGTGCTTCAAAACCAACCACAAGTTATCAGTACGT
GCTGAGTACAATGATGGTGGTAGAAGTGGAGGTGGGGATTTTGTTGCTGGGTTTCTTCTTGGGGGTGCTGTATTTGGAACATTAGCTTATGTTTTCGCACCGCAGATCAG
GAGATCTCTTCTAAATGAAAATGAGTATGGTTTTAAGAGGGCAAAGCGTCCAATCTACTACGATGAAGGTTTAGAGAAAACCAGAGAGACGTTGAATGCAAAAATAGGCC
AATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAAGAACACTCCAGCTGTGCCAGTTGAAGCTGATCCTGAGGTTGAAGCTACCTTTTAAATTCTG
CTTAAACATGGACTGCTCAAGGTTTGAAGTTTGTACATCTTAGACACCATTTCATCTCATGTGACAATTTGCCTCATTTCAAAGTTTTTTGGATTTGATCAAGATGAGAA
TTGGATATTGCAGCTTCATTGTTGGAATGATCTTTAAGGTTATTACCACTTTTAGAACTTTTTAAATCACCACTGAATTCCAATGTAGTTTTTGTTGTCCATATTAATAT
AAGAACATAGTCTAAATAGCCAAATTTTGGCATACATCTTGAAAAATGG
Protein sequenceShow/hide protein sequence
MAACFSPSLSLSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGL
EKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF