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Carg24060 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24060
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPhytocyanin domain-containing protein
Genome locationCarg_Chr10:5961802..5962249
RNA-Seq ExpressionCarg24060
SyntenyCarg24060
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0016020 - membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR003245 - Phytocyanin domain
IPR008972 - Cupredoxin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605126.1 hypothetical protein SDJN03_02443, partial [Cucurbita argyrosperma subsp. sororia]7.1e-70100Show/hide
Query:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
        MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
Subjt:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY

Query:  YFACGERNGLHCVDGNMKFSVLPKAY
        YFACGERNGLHCVDGNMKFSVLPKAY
Subjt:  YFACGERNGLHCVDGNMKFSVLPKAY

KAG7023920.1 hypothetical protein SDJN02_14948, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-70100Show/hide
Query:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
        MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
Subjt:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY

Query:  YFACGERNGLHCVDGNMKFSVLPKAY
        YFACGERNGLHCVDGNMKFSVLPKAY
Subjt:  YFACGERNGLHCVDGNMKFSVLPKAY

XP_022947924.1 uncharacterized protein LOC111451661 [Cucurbita moschata]5.6e-6796.83Show/hide
Query:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
        MSVVCSARGPKKIVVG  QTWEFGIDYSDWALKN PFYVNDVLVFRYPAPNGFGSPHSVYLLPN ESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
Subjt:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY

Query:  YFACGERNGLHCVDGNMKFSVLPKAY
        YFACGERNGLHCVDGNMKFSVLPKAY
Subjt:  YFACGERNGLHCVDGNMKFSVLPKAY

XP_023007536.1 uncharacterized protein LOC111499996 [Cucurbita maxima]2.6e-6493.65Show/hide
Query:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
        MS+VCSAR  KKIVVG  QTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPN ESFS CDFSKAREVANTSQGEGDGFEFVLEQSKTY
Subjt:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY

Query:  YFACGERNGLHCVDGNMKFSVLPKAY
        YFACGERNGLHC+DGNMKFSVLPKAY
Subjt:  YFACGERNGLHCVDGNMKFSVLPKAY

XP_023534531.1 uncharacterized protein LOC111796077 [Cucurbita pepo subsp. pepo]1.5e-6494.44Show/hide
Query:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
        MSVVCSAR PK+IVVG  QTWEFG+DYSD ALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPN ESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
Subjt:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY

Query:  YFACGERNGLHCVDGNMKFSVLPKAY
        YFACGERNGLHCVDGNMKFSVLPKAY
Subjt:  YFACGERNGLHCVDGNMKFSVLPKAY

TrEMBL top hitse value%identityAlignment
A0A151UAI8 Phytocyanin domain-containing protein2.8e-4064.91Show/hide
Query:  PKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNG
        P+KI+VG  + W FG +Y+DWA+KNGPFY+ND LVF+Y APN    PHSVYL PN  SF NCD  KA+ VAN  QGEG+GFEFVL++ + YYFACGERNG
Subjt:  PKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNG

Query:  LHCVDGNMKFSVLP
         HC +GNMKF+V+P
Subjt:  LHCVDGNMKFSVLP

A0A6J1D388 uncharacterized protein LOC1110171948.3e-4066.67Show/hide
Query:  KKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNGL
        KKI+VG  + W FG DY++WALKNGPFY+ND LVF+Y  PN    PHSVYLLPN  SFS CD   A++VAN +QG GDGFEFVL+QSK YYFACGERNG 
Subjt:  KKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNGL

Query:  HCVDGNMKFSVLPK
        HC  G MKFS+ P+
Subjt:  HCVDGNMKFSVLPK

A0A6J1D4K0 leucine-rich repeat extensin-like protein 34.8e-4062.93Show/hide
Query:  RGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGER
        + P+KI+VG  + W  G DYS+WALKNGPF++ND+LVF+Y  P G   PHSVYLL N +SFSNCD  +A ++AN +QG GDGF+FVL+Q KTYYFACGE 
Subjt:  RGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGER

Query:  NGLHCVDGNMKFSVLP
        NG HC +G+MKFSV P
Subjt:  NGLHCVDGNMKFSVLP

A0A6J1G8B8 uncharacterized protein LOC1114516612.7e-6796.83Show/hide
Query:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
        MSVVCSARGPKKIVVG  QTWEFGIDYSDWALKN PFYVNDVLVFRYPAPNGFGSPHSVYLLPN ESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
Subjt:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY

Query:  YFACGERNGLHCVDGNMKFSVLPKAY
        YFACGERNGLHCVDGNMKFSVLPKAY
Subjt:  YFACGERNGLHCVDGNMKFSVLPKAY

A0A6J1L0T6 uncharacterized protein LOC1114999961.3e-6493.65Show/hide
Query:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY
        MS+VCSAR  KKIVVG  QTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPN ESFS CDFSKAREVANTSQGEGDGFEFVLEQSKTY
Subjt:  MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTY

Query:  YFACGERNGLHCVDGNMKFSVLPKAY
        YFACGERNGLHC+DGNMKFSVLPKAY
Subjt:  YFACGERNGLHCVDGNMKFSVLPKAY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15770.1 Cupredoxin superfamily protein7.9e-2745.61Show/hide
Query:  PKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNG
        PKKI+VG    W+ G+DY DWA KN PFYVNDVLVF+Y         ++VYL  +  S+ NCD   AR++ +T +G  + F F L++ + Y+FA GE +G
Subjt:  PKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNG

Query:  LHCVDGNMKFSVLP
         +C + NMKF++ P
Subjt:  LHCVDGNMKFSVLP

AT2G15780.1 Cupredoxin superfamily protein3.5e-3553.04Show/hide
Query:  GPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERN
        GP+KI+VG  + W +G +Y+DWA K  PF++ND+LVF+Y  P  F   HSVYLLPN  S+  CD  K + +A+  QG G GFEFVL+Q K YY +CGE +
Subjt:  GPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERN

Query:  GLHCVDGNMKFSVLP
        G HC +G MKF+V+P
Subjt:  GLHCVDGNMKFSVLP

AT4G33930.1 Cupredoxin superfamily protein6.3e-1637.84Show/hide
Query:  WEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGS--------PHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNGLHC
        W+ G  Y++W  K+ PFYV+DVLVF+Y   +   S         + VYLLP+ +SF  C+ ++ +++         GF+ +L + +TYYFA G+ N   C
Subjt:  WEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGS--------PHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNGLHC

Query:  VDGNMKFSVLP
         + NMKFSV P
Subjt:  VDGNMKFSVLP

AT4G34300.1 Cupredoxin superfamily protein2.4e-1536.61Show/hide
Query:  WEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGS---------PHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNGLH
        W+ G  Y++W  K+ PFYVNDVLVF Y   +   S          + VYLLP+ +SF  C+ ++ +++         GF+ +L +  TYYF  G+ N   
Subjt:  WEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGS---------PHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNGLH

Query:  CVDGNMKFSVLP
          + NMKFSV P
Subjt:  CVDGNMKFSVLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTGTCTGTTCGGCCCGAGGTCCGAAAAAGATTGTCGTGGGCGATCGTCAAACTTGGGAGTTTGGCATTGACTATAGTGATTGGGCGTTAAAAAACGGCCCTTT
TTATGTTAATGATGTTCTTGTTTTCAGGTACCCGGCTCCAAATGGATTTGGATCTCCTCATAGTGTTTACTTGTTACCGAACTCGGAGAGTTTCTCGAACTGTGATTTTT
CAAAGGCTCGAGAGGTAGCGAATACGAGCCAAGGAGAAGGAGATGGGTTCGAGTTCGTGCTCGAACAATCTAAGACTTACTACTTTGCTTGTGGTGAACGCAATGGGTTG
CATTGCGTTGATGGAAACATGAAATTCTCTGTGTTACCAAAAGCTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTTGTCTGTTCGGCCCGAGGTCCGAAAAAGATTGTCGTGGGCGATCGTCAAACTTGGGAGTTTGGCATTGACTATAGTGATTGGGCGTTAAAAAACGGCCCTTT
TTATGTTAATGATGTTCTTGTTTTCAGGTACCCGGCTCCAAATGGATTTGGATCTCCTCATAGTGTTTACTTGTTACCGAACTCGGAGAGTTTCTCGAACTGTGATTTTT
CAAAGGCTCGAGAGGTAGCGAATACGAGCCAAGGAGAAGGAGATGGGTTCGAGTTCGTGCTCGAACAATCTAAGACTTACTACTTTGCTTGTGGTGAACGCAATGGGTTG
CATTGCGTTGATGGAAACATGAAATTCTCTGTGTTACCAAAAGCTTACTAG
Protein sequenceShow/hide protein sequence
MSVVCSARGPKKIVVGDRQTWEFGIDYSDWALKNGPFYVNDVLVFRYPAPNGFGSPHSVYLLPNSESFSNCDFSKAREVANTSQGEGDGFEFVLEQSKTYYFACGERNGL
HCVDGNMKFSVLPKAY