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Carg24064 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24064
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpeptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X1
Genome locationCarg_Chr16:5322679..5323617
RNA-Seq ExpressionCarg24064
SyntenyCarg24064
Gene Ontology termsGO:0000413 - protein peptidyl-prolyl isomerization (biological process)
GO:0009579 - thylakoid (cellular component)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
InterPro domainsIPR023222 - PsbQ-like domain superfamily
IPR044259 - Peptidyl-prolyl cis-trans isomerase CYP37-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577384.1 Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.2e-8293.68Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ
        MAFPLSSAVFSRRLSLS APHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSL      ESMDQHKFLR+SCISGFEHGKREFGKLIAMILICIQ
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ

Query:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
        ISSPLPLLNWDIQS+HPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT  G
Subjt:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG

KAG7015460.1 Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.9e-90100Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ
        MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ

Query:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
        ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
Subjt:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG

XP_022929302.1 peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X1 [Cucurbita moschata]9.4e-8192.53Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ
        MAFPLSSAVFSRRLSLS APHTTRCSFLHTHC + FTRSSGSSILPKLSSASAKNSSL      ESMDQHKFLR+SCISGFEHGKREFGKLIAMILICIQ
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ

Query:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
        ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT  G
Subjt:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG

XP_022985203.1 peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X1 [Cucurbita maxima]2.3e-7990.8Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ
        MAFPLSSAVFSRRLSLS APHTTRCSFLHTHC++ FTRSSGSSILPKLSSASAKNSSL      E+MDQHKFLR+SCISGFE+GKREFGKLIAMILICIQ
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ

Query:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
        ISSP PLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT  G
Subjt:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG

XP_023553133.1 peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]1.9e-8193.1Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ
        MAFPLSSAVFSRRLSLS APHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSL      E+MDQHKFLR+SCISGFEHGKREFGKLIAMILICIQ
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ

Query:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
        ISSPLPLLNWDIQSIHPA AVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT  G
Subjt:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG

TrEMBL top hitse value%identityAlignment
A0A0A0L367 PPIase cyclophilin-type domain-containing protein2.9e-5974.14Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ
        MAFPLSS V SRR SLS   H T+ +FLH++ I  FT SS +S+LPKLSS S  +SSL +       DQH FL++ CIS FE GKRE  KLIA++LICIQ
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ

Query:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
        ISSPLPLLNWD QSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT  G
Subjt:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG

A0A1S3BSV9 peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic1.8e-6177.59Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ
        MAFPLSS V SRR SLS A   T+  FLHT+ I  FT SSGSSILPKLSS SA NSSL +       DQH FL++ CIS FE GKRE  KLIA+ILICIQ
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ

Query:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
        ISSPLPL+NWD QSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT  G
Subjt:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG

A0A5A7TZN8 Peptidyl-prolyl cis-trans isomerase CYP373.1e-6172.77Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSL-----------------RVSVMQESMDQHKFLRKSCISGFEH
        MAFPLSS V SRR SLS A   T+  FLHT+ I  FT SSGSSILPKLSS SA NSSL                  VSV+Q   DQH FL++ CIS FE 
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSL-----------------RVSVMQESMDQHKFLRKSCISGFEH

Query:  GKREFGKLIAMILICIQISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
        GKRE  KLIA+ILICIQISSPLPL+NWD QSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT  G
Subjt:  GKREFGKLIAMILICIQISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG

A0A6J1EMF0 peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X14.6e-8192.53Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ
        MAFPLSSAVFSRRLSLS APHTTRCSFLHTHC + FTRSSGSSILPKLSSASAKNSSL      ESMDQHKFLR+SCISGFEHGKREFGKLIAMILICIQ
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ

Query:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
        ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT  G
Subjt:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG

A0A6J1JCX3 peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X11.1e-7990.8Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ
        MAFPLSSAVFSRRLSLS APHTTRCSFLHTHC++ FTRSSGSSILPKLSSASAKNSSL      E+MDQHKFLR+SCISGFE+GKREFGKLIAMILICIQ
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQ

Query:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG
        ISSP PLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT  G
Subjt:  ISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG

SwissProt top hitse value%identityAlignment
P82869 Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic2.9e-3250Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLR-VSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICI
        MA PLSS+         + P      FL     +PF R++      +L S S+K  +   +     S+D       S ++ FE G +   KL+A ILI +
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLR-VSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICI

Query:  QISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT
        Q+ SPLPL   D   I PA AVLYSPDTKVPRTGELALRRAIPAN SMK IQ SLE+ISYLLRIPQRKPYGT
Subjt:  QISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT

Arabidopsis top hitse value%identityAlignment
AT3G15520.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein2.1e-3350Show/hide
Query:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLR-VSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICI
        MA PLSS+         + P      FL     +PF R++      +L S S+K  +   +     S+D       S ++ FE G +   KL+A ILI +
Subjt:  MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLR-VSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICI

Query:  QISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT
        Q+ SPLPL   D   I PA AVLYSPDTKVPRTGELALRRAIPAN SMK IQ SLE+ISYLLRIPQRKPYGT
Subjt:  QISSPLPLLNWDIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTCCCTTTATCTTCGGCCGTTTTCTCTCGCCGGTTATCTCTCTCTGTCGCCCCTCACACTACGAGATGCAGCTTTCTTCATACACATTGCATAATTCCATTTAC
CCGGTCATCTGGAAGCTCGATTCTCCCGAAACTCTCCTCCGCGTCTGCTAAGAACTCATCACTGAGAGTTTCAGTGATGCAGGAATCAATGGACCAGCATAAGTTTCTCC
GAAAGTCATGTATTTCAGGTTTTGAACATGGAAAGAGGGAATTTGGGAAGTTAATTGCTATGATCCTCATATGTATCCAAATTTCTTCCCCATTGCCCTTGCTGAATTGG
GACATTCAATCAATTCATCCTGCGATGGCAGTACTTTATTCACCTGACACCAAGGTCCCAAGAACAGGAGAACTTGCATTAAGGAGAGCAATTCCTGCAAACACGAGCAT
GAAGGCGATACAGGACTCTTTAGAAGAGATATCATATTTGCTAAGGATTCCGCAAAGGAAGCCTTACGGAACCTATGGAGGGTAA
mRNA sequenceShow/hide mRNA sequence
GCGCGCCAAGGCCTCTCTGCAGCTACCAACTTCCTTTCATGGCGTTCCCTTTATCTTCGGCCGTTTTCTCTCGCCGGTTATCTCTCTCTGTCGCCCCTCACACTACGAGA
TGCAGCTTTCTTCATACACATTGCATAATTCCATTTACCCGGTCATCTGGAAGCTCGATTCTCCCGAAACTCTCCTCCGCGTCTGCTAAGAACTCATCACTGAGAGTTTC
AGTGATGCAGGAATCAATGGACCAGCATAAGTTTCTCCGAAAGTCATGTATTTCAGGTTTTGAACATGGAAAGAGGGAATTTGGGAAGTTAATTGCTATGATCCTCATAT
GTATCCAAATTTCTTCCCCATTGCCCTTGCTGAATTGGGACATTCAATCAATTCATCCTGCGATGGCAGTACTTTATTCACCTGACACCAAGGTCCCAAGAACAGGAGAA
CTTGCATTAAGGAGAGCAATTCCTGCAAACACGAGCATGAAGGCGATACAGGACTCTTTAGAAGAGATATCATATTTGCTAAGGATTCCGCAAAGGAAGCCTTACGGAAC
CTATGGAGGGTAA
Protein sequenceShow/hide protein sequence
MAFPLSSAVFSRRLSLSVAPHTTRCSFLHTHCIIPFTRSSGSSILPKLSSASAKNSSLRVSVMQESMDQHKFLRKSCISGFEHGKREFGKLIAMILICIQISSPLPLLNW
DIQSIHPAMAVLYSPDTKVPRTGELALRRAIPANTSMKAIQDSLEEISYLLRIPQRKPYGTYGG