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Carg24075 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24075
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein RRP5
Genome locationCarg_Chr16:5388038..5390296
RNA-Seq ExpressionCarg24075
SyntenyCarg24075
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.4e-41100Show/hide
Query:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
        MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
Subjt:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
XP_008452291.1 PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo]2.4e-3384.85Show/hide
Query:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
        MAKN+NKKKR GA+SMD+TEN+  ELPQAMDVS S VHKPASGAL+LKLKKGRPMKRSKNVRKT A AKAISK+EQS EKILKNQSKTTRI SAKTLYE
Subjt:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
XP_022929206.1 uncharacterized protein LOC111435867 [Cucurbita moschata]2.4e-41100Show/hide
Query:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
        MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
Subjt:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
XP_022985277.1 uncharacterized protein LOC111483316 [Cucurbita maxima]6.6e-3997.98Show/hide
Query:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
        MAKNKN KKRSGAISMDITENTA ELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
Subjt:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
XP_038903593.1 uncharacterized protein LOC120090147 [Benincasa hispida]3.8e-3485.86Show/hide
Query:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
        MAKN+NKKKRSG +SMD+TENT  ELPQAMDVSESAVHKP SGALNLKLKKGRPMKRSKNVRKT A AKAISK+EQS EKILKNQSKT RI SAK LYE
Subjt:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
TrEMBL top hitse value%identityAlignment
A0A1S3BUB2 uncharacterized protein LOC1034933621.2e-3384.85Show/hide
Query:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
        MAKN+NKKKR GA+SMD+TEN+  ELPQAMDVS S VHKPASGAL+LKLKKGRPMKRSKNVRKT A AKAISK+EQS EKILKNQSKTTRI SAKTLYE
Subjt:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
A0A6A6MLZ5 Uncharacterized protein2.2e-2470.71Show/hide
Query:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
        MAKN+NKKK++GA+SMDITE T  ++PQAMD SES V K ASG  N K+ KGRPMKRSKNVRK  A AKAISKNEQS EK+LKN+SKT R  SAK LY+
Subjt:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
A0A6J1CP23 uncharacterized protein LOC1110127891.0e-2481.71Show/hide
Query:  MDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTL
        MD+TENT  +LPQAMDVSES VHKP SG LNLKL+KGRPMKRS+NVRKT A AKAI K+EQSAEKI+KNQSKTTRI SAKTL
Subjt:  MDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTL
A0A6J1EMH0 uncharacterized protein LOC1114358671.2e-41100Show/hide
Query:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
        MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
Subjt:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
A0A6J1J4F8 uncharacterized protein LOC1114833163.2e-3997.98Show/hide
Query:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
        MAKNKN KKRSGAISMDITENTA ELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
Subjt:  MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27380.1 unknown protein2.5e-0430.13Show/hide
Query:  MAKNKNKKKRSGAISMDITE--NTAQELPQAMDVSESAVHKPASGALNL-KLKKGRP-------------------------------------------
        M K +NKK R    SMD++E  + ++  PQ MD +E+   K AS A +L   +KG+P                                           
Subjt:  MAKNKNKKKRSGAISMDITE--NTAQELPQAMDVSESAVHKPASGALNL-KLKKGRP-------------------------------------------

Query:  -----------MKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE
                   MKR+KN RK  A AKAI+ +E+   K  K+++KT R  SAK LYE
Subjt:  -----------MKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGAACAAGAATAAGAAGAAGCGAAGTGGGGCTATTTCAATGGACATAACCGAAAATACCGCTCAAGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGT
TCATAAACCAGCTTCCGGCGCTCTCAATCTAAAATTGAAAAAGGGAAGACCAATGAAGCGATCAAAGAATGTTAGGAAGACAATGGCGAAAGCAAAGGCCATATCCAAGA
ACGAGCAGTCAGCGGAGAAAATATTGAAAAATCAGAGCAAAACTACAAGAATACATTCTGCAAAAACATTGTATGAATGA
mRNA sequenceShow/hide mRNA sequence
AATATTCGACTCTACAGCTTCTGGCCGGTGAGGCTTCTTCTCGCTTCTTGCATTTTTCTTCCTTAGGGTTTTCGTTGTTAGTCTCCTCAGCGCTTATCTCTCAGCGATGG
CGAAGAACAAGAATAAGAAGAAGCGAAGTGGGGCTATTTCAATGGACATAACCGAAAATACCGCTCAAGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGTTCAT
AAACCAGCTTCCGGCGCTCTCAATCTAAAATTGAAAAAGGGAAGACCAATGAAGCGATCAAAGAATGTTAGGAAGACAATGGCGAAAGCAAAGGCCATATCCAAGAACGA
GCAGTCAGCGGAGAAAATATTGAAAAATCAGAGCAAAACTACAAGAATACATTCTGCAAAAACATTGTATGAATGATAGAAATGTGGGTTTAAATTGTAAAATTGTTTTA
TTTTTGTTCCTTTAATAGATGTTTATGGTACCTATCACTCATCATTTAGTGTCTCAATCCTGCAACTTCTAAGTTTCAAGTCACTTGTGAAATCCAAGCTATTCGCACAA
ATTTGTTTTAGAAAAGGAATTGTCTACTTGTGTAAGTCTATCGTCACTAGCAGGTGGCAATAGCATTAGGAGCTGGAAATTCTTATTCCTTCTTTGGACCACTCAGGTAT
TACACAAATCCTTATAGACGGAGTTCAAATGAGATCAAATCGCGTATTAATCTTTTTAACAAATTTAGTTTGTGATCTAGTCTTATACAAATTTA
Protein sequenceShow/hide protein sequence
MAKNKNKKKRSGAISMDITENTAQELPQAMDVSESAVHKPASGALNLKLKKGRPMKRSKNVRKTMAKAKAISKNEQSAEKILKNQSKTTRIHSAKTLYE