; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24081 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24081
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncalcium-binding protein PBP1-like
Genome locationCarg_Chr16:5428310..5428666
RNA-Seq ExpressionCarg24081
SyntenyCarg24081
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149304.1 calcium-binding protein KRP1 [Cucumis sativus]1.8e-5489.83Show/hide
Query:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
        MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL +REKGVIDFESLKRNAAALGL DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELM+
Subjt:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD

Query:  ESWFLLEDALNQEFKGFC
        ESWFLLE+AL+QEFK FC
Subjt:  ESWFLLEDALNQEFKGFC

XP_008452312.1 PREDICTED: calcium-binding protein PBP1 [Cucumis melo]5.5e-5692.37Show/hide
Query:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
        MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLADLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMD
Subjt:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD

Query:  ESWFLLEDALNQEFKGFC
        ESWFLLE+AL+QEFK FC
Subjt:  ESWFLLEDALNQEFKGFC

XP_022929391.1 calcium-binding protein PBP1-like [Cucurbita moschata]1.9e-61100Show/hide
Query:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
        MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
Subjt:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD

Query:  ESWFLLEDALNQEFKGFC
        ESWFLLEDALNQEFKGFC
Subjt:  ESWFLLEDALNQEFKGFC

XP_022985275.1 calcium-binding protein PBP1 [Cucurbita maxima]4.0e-5998.29Show/hide
Query:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
        MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDF SLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
Subjt:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD

Query:  ESWFLLEDALNQEFKGF
        ESWFLLEDAL+QEFKGF
Subjt:  ESWFLLEDALNQEFKGF

XP_038903612.1 calcium-binding protein KRP1-like [Benincasa hispida]7.1e-5691.53Show/hide
Query:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
        MAF A+QSGF+DWLP MA+RLGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLADLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSP+LMD
Subjt:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD

Query:  ESWFLLEDALNQEFKGFC
        ESWFLLE+ALNQEFK FC
Subjt:  ESWFLLEDALNQEFKGFC

TrEMBL top hitse value%identityAlignment
A0A0A0L347 EF-hand domain-containing protein8.5e-5589.83Show/hide
Query:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
        MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL +REKGVIDFESLKRNAAALGL DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELM+
Subjt:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD

Query:  ESWFLLEDALNQEFKGFC
        ESWFLLE+AL+QEFK FC
Subjt:  ESWFLLEDALNQEFKGFC

A0A1S3BSY1 calcium-binding protein PBP12.6e-5692.37Show/hide
Query:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
        MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLADLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMD
Subjt:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD

Query:  ESWFLLEDALNQEFKGFC
        ESWFLLE+AL+QEFK FC
Subjt:  ESWFLLEDALNQEFKGFC

A0A6J1CM41 calcium-binding protein PBP16.5e-4783.93Show/hide
Query:  QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLL
        +SGF DWLP MA RLGGEGLIGELC+GF+LL DREKGVIDFESLKRNAAALGL DL+DEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDES F L
Subjt:  QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLL

Query:  EDALNQEFKGFC
        + AL  EF+ FC
Subjt:  EDALNQEFKGFC

A0A6J1EN05 calcium-binding protein PBP1-like9.4e-62100Show/hide
Query:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
        MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
Subjt:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD

Query:  ESWFLLEDALNQEFKGFC
        ESWFLLEDALNQEFKGFC
Subjt:  ESWFLLEDALNQEFKGFC

A0A6J1JAW3 calcium-binding protein PBP12.0e-5998.29Show/hide
Query:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
        MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDF SLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD
Subjt:  MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMD

Query:  ESWFLLEDALNQEFKGF
        ESWFLLEDAL+QEFKGF
Subjt:  ESWFLLEDALNQEFKGF

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP11.6e-3771.56Show/hide
Query:  QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAA-LGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFL
        Q  F D+LP MA  LGGEGLIGELCNGF LL DREKGVI FESL+RNAAA LGL DL+DED+R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ S  L
Subjt:  QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAA-LGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFL

Query:  LEDALNQEF
        + + + +EF
Subjt:  LEDALNQEF

Q2TBN3 Centrin-21.6e-1041.86Show/hide
Query:  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLS
        F D+L  M +++  +    E+   F L  D E G I F++LKR A  LG  +LSDE+L+EM+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLS

Q9LSQ6 Calcium-binding protein PBP12.3e-3364.15Show/hide
Query:  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAA-ALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLED
        F+D+ P MA +LGGEGLI E+C GF LL D++KGVI FESL+RNA+  LGL DL+D+D+R M+ EGDFD DGALNQMEFCVLMFRLSPELM+ S  ++ +
Subjt:  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAA-ALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLED

Query:  ALNQEF
         + +EF
Subjt:  ALNQEF

Q9R1K9 Centrin-23.6e-1040.7Show/hide
Query:  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLS
        F D+L  M +++  +    E+   F L  D E G I F++LKR A  LG  +L+DE+L+EM+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLS

Q9ZPX9 Calcium-binding protein KIC4.2e-2755.14Show/hide
Query:  QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLL
        ++ +ED LP MAE++  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S ED + M+REGD DGDGALNQ EFCVLM RLSPE+M+++   L
Subjt:  QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLL

Query:  EDALNQE
        E AL QE
Subjt:  EDALNQE

Arabidopsis top hitse value%identityAlignment
AT2G46600.1 Calcium-binding EF-hand family protein3.0e-2855.14Show/hide
Query:  QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLL
        ++ +ED LP MAE++  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S ED + M+REGD DGDGALNQ EFCVLM RLSPE+M+++   L
Subjt:  QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLL

Query:  EDALNQE
        E AL QE
Subjt:  EDALNQE

AT4G27280.1 Calcium-binding EF-hand family protein1.1e-3871.56Show/hide
Query:  QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAA-LGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFL
        Q  F D+LP MA  LGGEGLIGELCNGF LL DREKGVI FESL+RNAAA LGL DL+DED+R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ S  L
Subjt:  QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAA-LGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFL

Query:  LEDALNQEF
        + + + +EF
Subjt:  LEDALNQEF

AT4G37010.1 centrin 21.5e-0633.33Show/hide
Query:  DQSG---FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLS
        +QSG   F++++  M  + G    I EL   F ++     G I    +K  A  LG  + +D D+ EM+ E D D DG +N  EF  +M R S
Subjt:  DQSG---FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLS

AT4G37010.2 centrin 21.5e-0633.33Show/hide
Query:  DQSG---FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLS
        +QSG   F++++  M  + G    I EL   F ++     G I    +K  A  LG  + +D D+ EM+ E D D DG +N  EF  +M R S
Subjt:  DQSG---FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLS

AT5G54490.1 pinoid-binding protein 11.6e-3464.15Show/hide
Query:  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAA-ALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLED
        F+D+ P MA +LGGEGLI E+C GF LL D++KGVI FESL+RNA+  LGL DL+D+D+R M+ EGDFD DGALNQMEFCVLMFRLSPELM+ S  ++ +
Subjt:  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAA-ALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLED

Query:  ALNQEF
         + +EF
Subjt:  ALNQEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTGTCGCAGACCAATCCGGATTCGAGGACTGGCTACCGAAGATGGCGGAGAGGCTGGGCGGCGAGGGGCTGATCGGGGAGCTTTGCAATGGATTCAATCTTCT
GAAGGACAGAGAGAAGGGGGTGATTGATTTCGAGAGTCTGAAGAGAAACGCGGCGGCGCTAGGGCTGGCGGATCTGAGCGATGAGGATCTGAGAGAAATGTTGAGGGAGG
GGGATTTCGACGGTGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTTATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGATGCTCTA
AACCAAGAGTTTAAGGGCTTCTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTTGTCGCAGACCAATCCGGATTCGAGGACTGGCTACCGAAGATGGCGGAGAGGCTGGGCGGCGAGGGGCTGATCGGGGAGCTTTGCAATGGATTCAATCTTCT
GAAGGACAGAGAGAAGGGGGTGATTGATTTCGAGAGTCTGAAGAGAAACGCGGCGGCGCTAGGGCTGGCGGATCTGAGCGATGAGGATCTGAGAGAAATGTTGAGGGAGG
GGGATTTCGACGGTGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTTATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGATGCTCTA
AACCAAGAGTTTAAGGGCTTCTGTTGA
Protein sequenceShow/hide protein sequence
MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDAL
NQEFKGFC