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Carg24106 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24106
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationCarg_Chr09:11147370..11154996
RNA-Seq ExpressionCarg24106
SyntenyCarg24106
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY39620.1 hypothetical protein CUMW_045800 [Citrus unshiu]3.0e-0546.51Show/hide
Query:  MRIWNPRSGENIHVVRGWSIMSYLDWHVEISCNRVCRWSCSNM
        + IWNP+ GEN HV+R WS +  L WH+++S +R+CRW   ++
Subjt:  MRIWNPRSGENIHVVRGWSIMSYLDWHVEISCNRVCRWSCSNM
KAG7025147.1 hypothetical protein SDJN02_13970, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-128100Show/hide
Query:  MRIWNPRSGENIHVVRGWSIMSYLDWHVEISCNRVCRWSCSNMGYPLWRVCKNLHRALRHHPISIGLPIMSTLFLLLSILPLGFLRLLSIIEGIGSLYLN
        MRIWNPRSGENIHVVRGWSIMSYLDWHVEISCNRVCRWSCSNMGYPLWRVCKNLHRALRHHPISIGLPIMSTLFLLLSILPLGFLRLLSIIEGIGSLYLN
Subjt:  MRIWNPRSGENIHVVRGWSIMSYLDWHVEISCNRVCRWSCSNMGYPLWRVCKNLHRALRHHPISIGLPIMSTLFLLLSILPLGFLRLLSIIEGIGSLYLN

Query:  DFSQNQLAEEGAAPSAAGGAGGGGATAASHSFAANGTATKKKQGKESEKKCMSSEERKINGFHQTINDKSSRFNLALGPTRHSKRLEQQEQEPHLQHPIE
        DFSQNQLAEEGAAPSAAGGAGGGGATAASHSFAANGTATKKKQGKESEKKCMSSEERKINGFHQTINDKSSRFNLALGPTRHSKRLEQQEQEPHLQHPIE
Subjt:  DFSQNQLAEEGAAPSAAGGAGGGGATAASHSFAANGTATKKKQGKESEKKCMSSEERKINGFHQTINDKSSRFNLALGPTRHSKRLEQQEQEPHLQHPIE

Query:  HQKFVRPIDLRQQVVQHHSRQCQSLGVEEPLPLLSP
        HQKFVRPIDLRQQVVQHHSRQCQSLGVEEPLPLLSP
Subjt:  HQKFVRPIDLRQQVVQHHSRQCQSLGVEEPLPLLSP
TrEMBL top hitse value%identityAlignment
A0A2H5NHG4 WD_REPEATS_REGION domain-containing protein1.5e-0546.51Show/hide
Query:  MRIWNPRSGENIHVVRGWSIMSYLDWHVEISCNRVCRWSCSNM
        + IWNP+ GEN HV+R WS +  L WH+++S +R+CRW   ++
Subjt:  MRIWNPRSGENIHVVRGWSIMSYLDWHVEISCNRVCRWSCSNM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATATGGAATCCAAGAAGTGGTGAAAATATTCATGTTGTGAGAGGATGGAGTATCATGTCTTACTTGGATTGGCACGTCGAGATATCTTGCAACCGGGTGTGTCG
ATGGTCGTGTTCGAATATGGGATACCCTCTCTGGAGAGTGTGTAAGAACCTTCACCGGGCACTCCGACACCATCCAATCTCTATCGGTCTGCCAATCATGAGTACCTTGT
TTCTGTTGCTCTCGATACTACCGCTCGGATTTTTGAGATTGTTGAGTATCATTGAGGGAATAGGATCTTTGTACTTGAATGACTTCTCTCAAAACCAACTGGCGGAGGAA
GGTGCTGCACCATCAGCAGCCGGTGGTGCCGGTGGTGGAGGTGCTACTGCAGCCTCCCACTCATTTGCTGCCAATGGAACTGCAACAAAGAAAAAACAAGGGAAAGAAAG
TGAGAAGAAATGCATGTCGAGTGAGGAAAGGAAAATTAATGGATTCCATCAAACAATTAACGACAAAAGCTCGAGATTCAACCTGGCTCTGGGGCCCACTCGACACTCGA
AGCGGCTGGAGCAGCAGGAGCAGGAACCACATCTGCAGCACCCCATTGAGCATCAGAAATTTGTGCGGCCCATTGATCTGAGGCAACAAGTGGTGCAGCACCATAGTCGG
CAATGCCAAAGTCTGGGGGTGGAAGAGCCTCTTCCTCTTCTTTCTCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGATATGGAATCCAAGAAGTGGTGAAAATATTCATGTTGTGAGAGGATGGAGTATCATGTCTTACTTGGATTGGCACGTCGAGATATCTTGCAACCGGGTGTGTCG
ATGGTCGTGTTCGAATATGGGATACCCTCTCTGGAGAGTGTGTAAGAACCTTCACCGGGCACTCCGACACCATCCAATCTCTATCGGTCTGCCAATCATGAGTACCTTGT
TTCTGTTGCTCTCGATACTACCGCTCGGATTTTTGAGATTGTTGAGTATCATTGAGGGAATAGGATCTTTGTACTTGAATGACTTCTCTCAAAACCAACTGGCGGAGGAA
GGTGCTGCACCATCAGCAGCCGGTGGTGCCGGTGGTGGAGGTGCTACTGCAGCCTCCCACTCATTTGCTGCCAATGGAACTGCAACAAAGAAAAAACAAGGGAAAGAAAG
TGAGAAGAAATGCATGTCGAGTGAGGAAAGGAAAATTAATGGATTCCATCAAACAATTAACGACAAAAGCTCGAGATTCAACCTGGCTCTGGGGCCCACTCGACACTCGA
AGCGGCTGGAGCAGCAGGAGCAGGAACCACATCTGCAGCACCCCATTGAGCATCAGAAATTTGTGCGGCCCATTGATCTGAGGCAACAAGTGGTGCAGCACCATAGTCGG
CAATGCCAAAGTCTGGGGGTGGAAGAGCCTCTTCCTCTTCTTTCTCCTTAG
Protein sequenceShow/hide protein sequence
MRIWNPRSGENIHVVRGWSIMSYLDWHVEISCNRVCRWSCSNMGYPLWRVCKNLHRALRHHPISIGLPIMSTLFLLLSILPLGFLRLLSIIEGIGSLYLNDFSQNQLAEE
GAAPSAAGGAGGGGATAASHSFAANGTATKKKQGKESEKKCMSSEERKINGFHQTINDKSSRFNLALGPTRHSKRLEQQEQEPHLQHPIEHQKFVRPIDLRQQVVQHHSR
QCQSLGVEEPLPLLSP