; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24107 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24107
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description40S ribosomal protein SA
Genome locationCarg_Chr09:11153307..11156569
RNA-Seq ExpressionCarg24107
SyntenyCarg24107
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607580.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]1.3e-15290.45Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTG H
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAAD-VVPAPAAPAA----SSVEWAPEPVPLAANEWEAAVAPPPPAPP
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW+AQI DAQWGAAD VVPA AA AA    SSVEW  EP  LAA+ W+AAVAPP  A P
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAAD-VVPAPAAPAA----SSVEWAPEPVPLAANEWEAAVAPPPPAPP

Query:  AADGAA-PSSASWF
        A DGAA PS+  W+
Subjt:  AADGAA-PSSASWF

XP_022925394.1 40S ribosomal protein SA-like [Cucurbita moschata]1.7e-173100Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA

Query:  APSSASWF
        APSSASWF
Subjt:  APSSASWF

XP_022932088.1 40S ribosomal protein SA-like [Cucurbita moschata]1.6e-15290.42Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTG H
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAAD-VVPAPAA---PAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW+AQI DAQWGAAD VVPA AA   P  SSVEW  EP  LAA+ W+AAVAPP  A PA
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAAD-VVPAPAA---PAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA

Query:  ADGAA-PSSASWF
         DGAA PS+  W+
Subjt:  ADGAA-PSSASWF

XP_022972886.1 40S ribosomal protein SA-like [Cucurbita maxima]3.6e-15289.49Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTG H
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVV----PAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW+AQI DAQWGAADVV     A A P  SSVEW  EP  LAA+ W+AAV+PP  A PA
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVV----PAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA

Query:  ADGAAPSSAS--WF
         DGAAP SA+  W+
Subjt:  ADGAAPSSAS--WF

XP_023525392.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo]2.8e-15289.59Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTG H
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAAD-VVPAPAAPAA-------SSVEWAPEPVPLAANEWEAAVAPPPP
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW+AQI DAQWGAAD VVPA AA AA       SSVEW  EP  LAA+ W+AAVAPP  
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAAD-VVPAPAAPAA-------SSVEWAPEPVPLAANEWEAAVAPPPP

Query:  APPAADGAA-PSSASWF
        A PA DGAA PS+  W+
Subjt:  APPAADGAA-PSSASWF

TrEMBL top hitse value%identityAlignment
A0A0A0K8X1 40S ribosomal protein SA9.7e-15188.35Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TG H
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPA-APAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADG
        MVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL  SDQW +QI DAQWGAAD +P+PA    AS  EWAPEPV LAA+ W+AA APPPP   +A+G
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPA-APAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADG

Query:  AAPSSASWF
         APSSASWF
Subjt:  AAPSSASWF

A0A6J1EC15 40S ribosomal protein SA8.2e-174100Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA

Query:  APSSASWF
        APSSASWF
Subjt:  APSSASWF

A0A6J1F0N2 40S ribosomal protein SA7.9e-15390.42Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTG H
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAAD-VVPAPAA---PAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW+AQI DAQWGAAD VVPA AA   P  SSVEW  EP  LAA+ W+AAVAPP  A PA
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAAD-VVPAPAA---PAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA

Query:  ADGAA-PSSASWF
         DGAA PS+  W+
Subjt:  ADGAA-PSSASWF

A0A6J1I769 40S ribosomal protein SA1.8e-15289.49Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTG H
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVV----PAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW+AQI DAQWGAADVV     A A P  SSVEW  EP  LAA+ W+AAV+PP  A PA
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVV----PAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA

Query:  ADGAAPSSAS--WF
         DGAAP SA+  W+
Subjt:  ADGAAPSSAS--WF

A0A6J1I7P9 40S ribosomal protein SA8.2e-174100Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA

Query:  APSSASWF
        APSSASWF
Subjt:  APSSASWF

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA1.1e-12776.77Show/hide
Query:  AAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAG
        A P R LSQKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG HAIAG
Subjt:  AAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GHKWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPL--VASDQWAAQISDA-QWGA--ADVVPAPAAPAASSVEWAPEP--VPLAANEWEAAVAPPPPAPPAA
        FFYREPEE KE+E +E +  PD+GI DY A  L  +    W A I+DA QWGA    V P PA P ++  + AP P  VP+A + W+AA APP   PP  
Subjt:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPL--VASDQWAAQISDA-QWGA--ADVVPAPAAPAASSVEWAPEP--VPLAANEWEAAVAPPPPAPPAA

Query:  DGAAPSSASW
            P  A W
Subjt:  DGAAPSSASW

O22518 40S ribosomal protein SA6.7e-12578.62Show/hide
Query:  AAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAG
        AAP RQLSQKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTWEKL +AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTG HAIAG
Subjt:  AAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEW-APEPVPLAA-NEWEAAVAPPP--PAPPAA-DG
        FFYREPEEAK++EEEEA P  D+ I D+ A  + A  QW   I D  W  +D VP P  PA   V W AP   P AA  +W  AV PP   P PP+  D 
Subjt:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEW-APEPVPLAA-NEWEAAVAPPP--PAPPAA-DG

Query:  AAPS
          PS
Subjt:  AAPS

O65751 40S ribosomal protein SA1.7e-12376.07Show/hide
Query:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        MAT  AP+RQL+QKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTG H
Subjt:  MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEW-APEPVPLAANEWEAAVAPPPPAPPAADG
        MVDLFFYREPEEAK+ EE+E +  PD+ IAD+  + + +  QW A I D  W  A   P PA PA   V W APE V   A +W  AV PP   P A   
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEW-APEPVPLAANEWEAAVAPPPPAPPAADG

Query:  AAPSS
        + P++
Subjt:  AAPSS

O80377 40S ribosomal protein SA1.7e-12377.59Show/hide
Query:  AAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAG
        A+ AR+LS  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTG HAIAG
Subjt:  AAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+VMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGAAPS
        FFYREPEE K++EEE+ LP  D+ +ADY AAP+  +DQW A I DAQWG   V PA +A  A +  W  +  P+A + W+AA APP P     D  AP+
Subjt:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGAAPS

Q08682 40S ribosomal protein Sa-13.5e-12176.85Show/hide
Query:  MAT-GAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGT
        MAT G+A + QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKL MAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTG 
Subjt:  MAT-GAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGT

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-AAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA
        VMVDLFFYREPEE K ++E+EA P  ++G        +V  DQW  AQI DA W      P  AAPAA+S  W+      A   WEAA APP  AP A
Subjt:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-AAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA2.5e-12276.85Show/hide
Query:  MAT-GAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGT
        MAT G+A + QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKL MAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTG 
Subjt:  MAT-GAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGT

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-AAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA
        VMVDLFFYREPEE K ++E+EA P  ++G        +V  DQW  AQI DA W      P  AAPAA+S  W+      A   WEAA APP  AP A
Subjt:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-AAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA

AT1G72370.2 40s ribosomal protein SA1.2e-12176.85Show/hide
Query:  MAT-GAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGT
        MAT G+A + QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKL MAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTG 
Subjt:  MAT-GAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGT

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-AAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA
        VMVDLFFYREPEE K ++E+EA P  ++G        +V  DQW  AQI DA W      P  AAPAA+S  W+      A   WEAA APP  AP A
Subjt:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-AAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPA

AT3G04770.1 40s ribosomal protein SA B3.3e-10388.67Show/hide
Query:  ATGAAPA-RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        A G A A RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KL MAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +
Subjt:  ATGAAPA-RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVD
        MV+
Subjt:  MVD

AT3G04770.2 40s ribosomal protein SA B8.2e-11876.21Show/hide
Query:  ATGAAPA-RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH
        A G A A RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KL MAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +
Subjt:  ATGAAPA-RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-AAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAP
        MVDLFFYREPEEAK++ +EEA    D+G        +V  DQW  AQISDA W      P  AAPA          V +AA  WEAA  P
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-AAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAGCTGCACCGGCGCGTCAACTCTCACAGAAAGAGGCCGACATTCAGATGATGTTGGCAGCCGAGGTTCATCTTGGCACCAAAAATTGCAATTTTCAAAT
GGAACGATACGTTTTTAAGCGCCGAAATGATGGTATCTACATCATTAACCTTGGTAAAACATGGGAGAAACTTTACATGGCTGCTAGAGTTATTGTGGCTATAGAGAATC
CTCAAGATATCATTGTTCAGTCTGCTAGGCCCTATGGTCAGAGGGCTGTTTTGAAGTTCGCTCAGTACACTGGTACTCATGCTATTGCAGGAAGGCACACTCCCGGAACA
TTTACCAACCAGCTTCAGACGTCGTTCAATGAACCGCGTCTTCTTATACTTACTGATCCTAGAACTGATCATCAGCCCATTAAGGAAGGTGCCCTTGGGAACATTCCTAC
AATAGCCTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATATTGGAATCCCGGCTAATAACAAGGGAAAACATAGCATAGGATGTCTGTTTTGGCTTTTGGCAAGGA
TGGTTCTACAAATGCGTGGGACAATTCGTGCTGGGCACAAATGGGATGTTATGGTGGATTTGTTTTTCTATCGTGAGCCTGAGGAGGCTAAGGAGAAAGAAGAGGAAGAG
GCTCTTCCACCCCCAGACTTTGGCATTGCCGACTATGGTGCTGCACCACTTGTTGCCTCAGATCAATGGGCCGCACAAATTTCTGATGCTCAATGGGGTGCTGCAGATGT
GGTTCCTGCTCCTGCTGCTCCAGCCGCTTCGAGTGTCGAGTGGGCCCCAGAGCCAGTTCCATTGGCAGCAAATGAGTGGGAGGCTGCAGTAGCACCTCCACCACCGGCAC
CACCGGCTGCTGATGGTGCAGCACCTTCCTCCGCCAGTTGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
TTTCTCTCTCCAGTTCGTTGAGCATTGCTGCGCCGAAGAGCACGAATCCCTTCTCCTTTCTTTTTCTCTGTTGATTACCAGATTCCGCCATGGCGACTGGAGCTGCACCG
GCGCGTCAACTCTCACAGAAAGAGGCCGACATTCAGATGATGTTGGCAGCCGAGGTTCATCTTGGCACCAAAAATTGCAATTTTCAAATGGAACGATACGTTTTTAAGCG
CCGAAATGATGGTATCTACATCATTAACCTTGGTAAAACATGGGAGAAACTTTACATGGCTGCTAGAGTTATTGTGGCTATAGAGAATCCTCAAGATATCATTGTTCAGT
CTGCTAGGCCCTATGGTCAGAGGGCTGTTTTGAAGTTCGCTCAGTACACTGGTACTCATGCTATTGCAGGAAGGCACACTCCCGGAACATTTACCAACCAGCTTCAGACG
TCGTTCAATGAACCGCGTCTTCTTATACTTACTGATCCTAGAACTGATCATCAGCCCATTAAGGAAGGTGCCCTTGGGAACATTCCTACAATAGCCTTTTGTGACACTGA
TTCTCCAATGCGGTATGTTGATATTGGAATCCCGGCTAATAACAAGGGAAAACATAGCATAGGATGTCTGTTTTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGGA
CAATTCGTGCTGGGCACAAATGGGATGTTATGGTGGATTTGTTTTTCTATCGTGAGCCTGAGGAGGCTAAGGAGAAAGAAGAGGAAGAGGCTCTTCCACCCCCAGACTTT
GGCATTGCCGACTATGGTGCTGCACCACTTGTTGCCTCAGATCAATGGGCCGCACAAATTTCTGATGCTCAATGGGGTGCTGCAGATGTGGTTCCTGCTCCTGCTGCTCC
AGCCGCTTCGAGTGTCGAGTGGGCCCCAGAGCCAGTTCCATTGGCAGCAAATGAGTGGGAGGCTGCAGTAGCACCTCCACCACCGGCACCACCGGCTGCTGATGGTGCAG
CACCTTCCTCCGCCAGTTGGTTTTGAGAGAAGTCCTAACGATTTGTACCCAAATGGATTCATTATTATGAGTTTGCTTGTTTATTTAGGAATATCACCCTTCTTTTTTGG
CTGCATAATCGACTCAATTTTGTTTGTTAGTCCCAGTTTTAGATTTAAAGATTGAATTATATCTGACTTCCATTTACCCTTTTTGAGATATATGAGAAATTACATGATCT
TTTGCATACAAACAATATATTAATTGTGGGTGGTAGAAGCTCCATTTTTCGTCTAAACACCTTGAATTTGATATACGTACCCAGATTCTTTTTTCTTCCCTTGTGAGTTA
TGGCGTTTCTCTTTACATTAGAATGTGAGTTTGTGGACACCTTGCGAGAAAACATGGGTAGGACATTCTACAAAAACATGGGTAGGGTAAACTTGCAAGAAACATCGGCA
GTGCG
Protein sequenceShow/hide protein sequence
MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAGRHTPGT
FTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEE
ALPPPDFGIADYGAAPLVASDQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGAAPSSASWF