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Carg24143 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24143
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:1618489..1620494
RNA-Seq ExpressionCarg24143
SyntenyCarg24143
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035066.1 hypothetical protein SDJN02_01861, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-59100Show/hide
Query:  MLTTMVEQRTEASRSTKEGEEAKQKKAVVWEPIIVSCSIGRLKPGFVVVKATGFRSPGLPATMGRICWLPWMFMGGQLQQIVFCLDLDMDRLRRCSLVRL
        MLTTMVEQRTEASRSTKEGEEAKQKKAVVWEPIIVSCSIGRLKPGFVVVKATGFRSPGLPATMGRICWLPWMFMGGQLQQIVFCLDLDMDRLRRCSLVRL
Subjt:  MLTTMVEQRTEASRSTKEGEEAKQKKAVVWEPIIVSCSIGRLKPGFVVVKATGFRSPGLPATMGRICWLPWMFMGGQLQQIVFCLDLDMDRLRRCSLVRL

Query:  PGISVDQHIAGKDGIN
        PGISVDQHIAGKDGIN
Subjt:  PGISVDQHIAGKDGIN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAACGACTATGGTGGAGCAAAGGACCGAGGCTTCTAGATCAACGAAAGAAGGAGAGGAAGCGAAACAGAAGAAAGCTGTGGTTTGGGAACCAATCATCGTCTCTTG
CTCTATCGGAAGGCTGAAGCCGGGATTCGTGGTCGTAAAGGCCACTGGTTTCCGGTCACCGGGGTTGCCTGCAACCATGGGGAGAATCTGTTGGCTTCCTTGGATGTTTA
TGGGAGGACAACTTCAGCAGATAGTTTTTTGCTTAGATTTGGACATGGATCGCCTCCGAAGATGCTCGTTGGTACGGTTGCCAGGCATCTCTGTCGACCAACACATAGCT
GGAAAAGACGGTATAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAACGACTATGGTGGAGCAAAGGACCGAGGCTTCTAGATCAACGAAAGAAGGAGAGGAAGCGAAACAGAAGAAAGCTGTGGTTTGGGAACCAATCATCGTCTCTTG
CTCTATCGGAAGGCTGAAGCCGGGATTCGTGGTCGTAAAGGCCACTGGTTTCCGGTCACCGGGGTTGCCTGCAACCATGGGGAGAATCTGTTGGCTTCCTTGGATGTTTA
TGGGAGGACAACTTCAGCAGATAGTTTTTTGCTTAGATTTGGACATGGATCGCCTCCGAAGATGCTCGTTGGTACGGTTGCCAGGCATCTCTGTCGACCAACACATAGCT
GGAAAAGACGGTATAAATTAGGAACTTAGTATTGTAGTTTGAAGTTTTGATCTTGTCGATTACAGATCAATCATCAAGACAATATTTGAAAAGGTTCCTTGCTGAAGATT
TCCA
Protein sequenceShow/hide protein sequence
MLTTMVEQRTEASRSTKEGEEAKQKKAVVWEPIIVSCSIGRLKPGFVVVKATGFRSPGLPATMGRICWLPWMFMGGQLQQIVFCLDLDMDRLRRCSLVRLPGISVDQHIA
GKDGIN