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Carg24148 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24148
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:1653094..1654976
RNA-Seq ExpressionCarg24148
SyntenyCarg24148
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035071.1 hypothetical protein SDJN02_01866, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-140100Show/hide
Query:  MKQEPSTSVPRQWKRRHKKFCSLLRIAAAAEDCCCSSFNPDAFQKLFVILLKVSWKQELPVNFITPKLNTLDPVQLTDQLGNPNVLVTLARRSSFGNTTD
        MKQEPSTSVPRQWKRRHKKFCSLLRIAAAAEDCCCSSFNPDAFQKLFVILLKVSWKQELPVNFITPKLNTLDPVQLTDQLGNPNVLVTLARRSSFGNTTD
Subjt:  MKQEPSTSVPRQWKRRHKKFCSLLRIAAAAEDCCCSSFNPDAFQKLFVILLKVSWKQELPVNFITPKLNTLDPVQLTDQLGNPNVLVTLARRSSFGNTTD

Query:  HLVVIYLLKLVSKKSPSSSSTTRSSSSSSTSSFFKLLASLAELDASTPEDASSSFLFVPEATMSASSFLLASVVEGNAFEVLSPLPNDVLLLSPFSSVVC
        HLVVIYLLKLVSKKSPSSSSTTRSSSSSSTSSFFKLLASLAELDASTPEDASSSFLFVPEATMSASSFLLASVVEGNAFEVLSPLPNDVLLLSPFSSVVC
Subjt:  HLVVIYLLKLVSKKSPSSSSTTRSSSSSSTSSFFKLLASLAELDASTPEDASSSFLFVPEATMSASSFLLASVVEGNAFEVLSPLPNDVLLLSPFSSVVC

Query:  CHPDRTIPSGSFSSSNSSLHGVYIYIYDSCHSAFLSQHDLIRNPEIPMFDVDTAAKLLLEILNG
        CHPDRTIPSGSFSSSNSSLHGVYIYIYDSCHSAFLSQHDLIRNPEIPMFDVDTAAKLLLEILNG
Subjt:  CHPDRTIPSGSFSSSNSSLHGVYIYIYDSCHSAFLSQHDLIRNPEIPMFDVDTAAKLLLEILNG
TrEMBL top hitse value%identityAlignment
A0A6N2MCT8 Uncharacterized protein3.0e-0752.56Show/hide
Query:  PEDASSSFLFVPEATMSASSFLLASVVE------GNAFEVLSPLPNDVLLLSPFSSVVCCHPDRTIPSGSFSSSNSSL
        P + S SFLFVP  T+ +   L +  +       GN F+VL+P P DV L S FS   C HP+RTIPSGSFSSSNSSL
Subjt:  PEDASSSFLFVPEATMSASSFLLASVVE------GNAFEVLSPLPNDVLLLSPFSSVVCCHPDRTIPSGSFSSSNSSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAGGAACCATCAACTTCTGTGCCTCGTCAATGGAAACGTCGCCATAAGAAGTTCTGTTCCCTCCTGAGGATTGCTGCTGCAGCTGAGGATTGCTGCTGCAGCTC
ATTCAATCCGGATGCCTTCCAGAAATTGTTTGTGATCTTGTTGAAAGTCTCATGGAAACAGGAATTGCCAGTCAACTTCATAACTCCAAAGCTCAACACTCTCGACCCAG
TTCAGTTGACTGATCAATTAGGCAACCCCAATGTACTGGTGACATTGGCCAGACGCAGCTCGTTTGGGAACACGACCGATCACCTCGTCGTCATCTACCTGCTCAAGCTC
GTGAGTAAGAAATCCCCATCATCATCAAGCACGACAAGGTCGTCGTCGTCGTCGAGCACTTCAAGTTTCTTCAAGCTATTAGCTTCATTAGCTGAACTTGATGCATCGAC
ACCTGAAGATGCCTCGTCCAGTTTTCTTTTCGTTCCAGAAGCAACGATGTCTGCGTCATCGTTCTTATTAGCATCTGTTGTCGAGGGCAACGCCTTCGAGGTGCTTTCTC
CATTGCCCAATGATGTCTTGCTGCTATCACCCTTTTCCAGTGTCGTTTGCTGCCATCCAGATAGAACCATACCGTCTGGTTCCTTCTCCTCGTCAAATTCGTCTCTGCAC
GGTGTATATATATATATATATGATTCTTGTCATTCTGCATTTCTTTCACAGCATGATTTAATCCGAAATCCAGAAATACCTATGTTTGATGTTGATACTGCAGCTAAGCT
CTTGCTGGAGATCCTCAACGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACAGGAACCATCAACTTCTGTGCCTCGTCAATGGAAACGTCGCCATAAGAAGTTCTGTTCCCTCCTGAGGATTGCTGCTGCAGCTGAGGATTGCTGCTGCAGCTC
ATTCAATCCGGATGCCTTCCAGAAATTGTTTGTGATCTTGTTGAAAGTCTCATGGAAACAGGAATTGCCAGTCAACTTCATAACTCCAAAGCTCAACACTCTCGACCCAG
TTCAGTTGACTGATCAATTAGGCAACCCCAATGTACTGGTGACATTGGCCAGACGCAGCTCGTTTGGGAACACGACCGATCACCTCGTCGTCATCTACCTGCTCAAGCTC
GTGAGTAAGAAATCCCCATCATCATCAAGCACGACAAGGTCGTCGTCGTCGTCGAGCACTTCAAGTTTCTTCAAGCTATTAGCTTCATTAGCTGAACTTGATGCATCGAC
ACCTGAAGATGCCTCGTCCAGTTTTCTTTTCGTTCCAGAAGCAACGATGTCTGCGTCATCGTTCTTATTAGCATCTGTTGTCGAGGGCAACGCCTTCGAGGTGCTTTCTC
CATTGCCCAATGATGTCTTGCTGCTATCACCCTTTTCCAGTGTCGTTTGCTGCCATCCAGATAGAACCATACCGTCTGGTTCCTTCTCCTCGTCAAATTCGTCTCTGCAC
GGTGTATATATATATATATATGATTCTTGTCATTCTGCATTTCTTTCACAGCATGATTTAATCCGAAATCCAGAAATACCTATGTTTGATGTTGATACTGCAGCTAAGCT
CTTGCTGGAGATCCTCAACGGATAA
Protein sequenceShow/hide protein sequence
MKQEPSTSVPRQWKRRHKKFCSLLRIAAAAEDCCCSSFNPDAFQKLFVILLKVSWKQELPVNFITPKLNTLDPVQLTDQLGNPNVLVTLARRSSFGNTTDHLVVIYLLKL
VSKKSPSSSSTTRSSSSSSTSSFFKLLASLAELDASTPEDASSSFLFVPEATMSASSFLLASVVEGNAFEVLSPLPNDVLLLSPFSSVVCCHPDRTIPSGSFSSSNSSLH
GVYIYIYDSCHSAFLSQHDLIRNPEIPMFDVDTAAKLLLEILNG