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Carg24162 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24162
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:6338910..6342460
RNA-Seq ExpressionCarg24162
SyntenyCarg24162
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048838.1 hypothetical protein E6C27_scaffold171G00510 [Cucumis melo var. makuwa]4.7e-4974.42Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
        M +++ FNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+EHQIV FFTR         +G+CIERVYVHYP+GG QLPLFGKVVFVASSIPAI+
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII

Query:  LGGKDEAKFSIESKTLWCKRYEARKTRFR
        LGGK+EAKFSI+SKT+WCK++EARK R R
Subjt:  LGGKDEAKFSIESKTLWCKRYEARKTRFR

KAE8650218.1 hypothetical protein Csa_011746 [Cucumis sativus]1.5e-4772.09Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
        M +++ FNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+E+QIV FFTR         +G+CIERVYVHYP+GG QLPLFGKVVFVASSIPAI+
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII

Query:  LGGKDEAKFSIESKTLWCKRYEARKTRFR
        LGGK+EAKFSI++KT+WCK++E+RK R R
Subjt:  LGGKDEAKFSIESKTLWCKRYEARKTRFR

KAG7028512.1 hypothetical protein SDJN02_09693, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-142100Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
        MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII

Query:  LGGKDEAKFSIESKTLWCKRYEARKTRFRKLKSDPSNFPIPIFEISIFTDCGESRPALIPVSSLLRSEDVSEDKTCWKDSCWSVGIIFPLKKRGGVTIKK
        LGGKDEAKFSIESKTLWCKRYEARKTRFRKLKSDPSNFPIPIFEISIFTDCGESRPALIPVSSLLRSEDVSEDKTCWKDSCWSVGIIFPLKKRGGVTIKK
Subjt:  LGGKDEAKFSIESKTLWCKRYEARKTRFRKLKSDPSNFPIPIFEISIFTDCGESRPALIPVSSLLRSEDVSEDKTCWKDSCWSVGIIFPLKKRGGVTIKK

Query:  REVGNMTMSQGMQENVGIVYTLKKQGVGNVTMSQGMQGNVEATKWSI
        REVGNMTMSQGMQENVGIVYTLKKQGVGNVTMSQGMQGNVEATKWSI
Subjt:  REVGNMTMSQGMQENVGIVYTLKKQGVGNVTMSQGMQGNVEATKWSI

XP_022944781.1 uncharacterized protein LOC111449194 [Cucurbita moschata]1.1e-6393.8Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
        MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTR        NYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII

Query:  LGGKDEAKFSIESKTLWCKRYEARKTRFR
        LGGKDEAKFSIESKTLWCKRYEARKTRFR
Subjt:  LGGKDEAKFSIESKTLWCKRYEARKTRFR

XP_023540960.1 uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]5.7e-6393.02Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
        MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTR         YGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII

Query:  LGGKDEAKFSIESKTLWCKRYEARKTRFR
        LGGKDEAKFSIESKTLWCKRYEARKTRFR
Subjt:  LGGKDEAKFSIESKTLWCKRYEARKTRFR

TrEMBL top hitse value%identityAlignment
A0A0A0L3N4 Uncharacterized protein7.0e-4368.22Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
        M +++ FNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+E+QIV FFT                RVYVHYP+GG QLPLFGKVVFVASSIPAI+
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII

Query:  LGGKDEAKFSIESKTLWCKRYEARKTRFR
        LGGK+EAKFSI++KT+WCK++E+RK R R
Subjt:  LGGKDEAKFSIESKTLWCKRYEARKTRFR

A0A5A7U0U8 Uncharacterized protein2.3e-4974.42Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
        M +++ FNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+EHQIV FFTR         +G+CIERVYVHYP+GG QLPLFGKVVFVASSIPAI+
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII

Query:  LGGKDEAKFSIESKTLWCKRYEARKTRFR
        LGGK+EAKFSI+SKT+WCK++EARK R R
Subjt:  LGGKDEAKFSIESKTLWCKRYEARKTRFR

A0A6J1E9T6 uncharacterized protein LOC1114320889.8e-4573.77Show/hide
Query:  NGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEA
        NG   LNP AKEW+P+ D APEEDRCLFLTFSNG PL+EHQIV+FFTR         +G+CIERVYVHY +GG + PLFGKVVFVASSIPAIIL GKDEA
Subjt:  NGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEA

Query:  KFSIESKTLWCKRYEARKTRFR
        KFSIES+T+WCKRYEARK R+R
Subjt:  KFSIESKTLWCKRYEARKTRFR

A0A6J1FZ16 uncharacterized protein LOC1114491945.5e-6493.8Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
        MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTR        NYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAII

Query:  LGGKDEAKFSIESKTLWCKRYEARKTRFR
        LGGKDEAKFSIESKTLWCKRYEARKTRFR
Subjt:  LGGKDEAKFSIESKTLWCKRYEARKTRFR

A0A6J1IWW8 uncharacterized protein LOC1114792143.7e-4472.95Show/hide
Query:  NGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEA
        NG   LNP AKEW+P+ D APEEDRCLFLTFSNG PL+EHQIV+FFTR         +G+CIERVYVHY +GG + PLFGKVVFVASSIPAIIL GKDEA
Subjt:  NGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEA

Query:  KFSIESKTLWCKRYEARKTRFR
        KF IES+T+WCKRYEARK R+R
Subjt:  KFSIESKTLWCKRYEARKTRFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49290.1 unknown protein2.1e-0734.04Show/hide
Query:  EDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVV--FVASSIPAIILGGKDEAKFSIESKTLWCKRY
        +DR +FLTFS G P+SE ++  +FTR         +G  IE V +   +   Q PLF K+V     +S+   I+  +   KF+I+ K +W ++Y
Subjt:  EDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVV--FVASSIPAIILGGKDEAKFSIESKTLWCKRY

AT1G64870.1 unknown protein2.5e-0831.25Show/hide
Query:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYG-SCIERVYVHYPDGGT------------QLPLFGKVVFVASSIPAIILGGKDEAKFSIES
        A +++R +FLTFS G P+S  ++++ FT          YG  C+E VY+   DGG             Q PLF K+V  +      IL G+++ K+ I  
Subjt:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYG-SCIERVYVHYPDGGT------------QLPLFGKVVFVASSIPAIILGGKDEAKFSIES

Query:  KTLWCKRYEARK
        K +W ++++  K
Subjt:  KTLWCKRYEARK

AT3G45200.1 unknown protein3.6e-0728.81Show/hide
Query:  WNPLFDC-APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYG-SCIERVYVHYPDGGT----------QLPLFGKVVFVASSIPAIILGGKDEA
        WN   +C A E DR LFLTFS G P++  +I+  FT+         YG +C+E VY+ + +  +          Q  LF ++V  + +    +L  + + 
Subjt:  WNPLFDC-APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYG-SCIERVYVHYPDGGT----------QLPLFGKVVFVASSIPAIILGGKDEA

Query:  KFSIESKTLWCKRYEARK
        +  I  K +W ++Y+ R+
Subjt:  KFSIESKTLWCKRYEARK

AT5G11220.1 unknown protein5.5e-0831.13Show/hide
Query:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYG-SCIERVYV----------HYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKT
        A + +R +F+TFS G P+S+ ++  FFT+        NYG +C+E VY+          +  D G Q  LF K+V  + +    IL G+   +F    K 
Subjt:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYG-SCIERVYV----------HYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKT

Query:  LWCKRY
        +W ++Y
Subjt:  LWCKRY

AT5G13620.1 unknown protein5.9e-1034Show/hide
Query:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKT
        A E+DR +FLTFS G PLSE ++  +FTR         +G  IE + +   +G  Q      V+  A+ IP I+  G +  K++I  K +W ++Y  R +
Subjt:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCCCTTCAGGGCTTTAATGGCGCTGATCATTTGAACCCTCAGGCCAAAGAATGGAACCCTCTTTTCGATTGCGCTCCCGAGGAAGATCGCTGCCTCTTTCTCAC
TTTCTCGAATGGAAACCCGCTCTCGGAACACCAAATTGTTAACTTCTTCACTCGGTACGCCCTTTCTAACCTTCTTTCAAACTACGGGTCGTGCATCGAAAGGGTATACG
TGCATTATCCGGACGGAGGGACTCAATTGCCATTGTTTGGGAAGGTGGTATTTGTTGCATCTTCAATACCAGCAATAATTCTAGGAGGAAAAGACGAAGCCAAGTTTTCG
ATTGAGAGCAAGACGTTATGGTGTAAGAGATACGAGGCTCGAAAAACTCGATTTAGAAAACTGAAATCGGATCCATCAAACTTTCCAATTCCAATCTTTGAAATTTCCAT
CTTCACAGATTGTGGTGAATCTCGCCCCGCTCTAATACCAGTTTCTTCCCTCTTAAGAAGCGAGGATGTGAGTGAGGACAAAACATGTTGGAAGGACTCGTGTTGGTCTG
TGGGGATAATCTTCCCTCTTAAGAAGCGAGGAGGCGTGACAATTAAGAAGCGAGAAGTAGGTAACATGACCATGTCACAAGGGATGCAAGAGAATGTCGGGATAGTCTAC
ACTCTTAAAAAGCAAGGAGTAGGTAACGTGACCATGTCGCAGGGGATGCAAGGGAATGTCGAGGCCACCAAGTGGTCAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTCCCTTCAGGGCTTTAATGGCGCTGATCATTTGAACCCTCAGGCCAAAGAATGGAACCCTCTTTTCGATTGCGCTCCCGAGGAAGATCGCTGCCTCTTTCTCAC
TTTCTCGAATGGAAACCCGCTCTCGGAACACCAAATTGTTAACTTCTTCACTCGGTACGCCCTTTCTAACCTTCTTTCAAACTACGGGTCGTGCATCGAAAGGGTATACG
TGCATTATCCGGACGGAGGGACTCAATTGCCATTGTTTGGGAAGGTGGTATTTGTTGCATCTTCAATACCAGCAATAATTCTAGGAGGAAAAGACGAAGCCAAGTTTTCG
ATTGAGAGCAAGACGTTATGGTGTAAGAGATACGAGGCTCGAAAAACTCGATTTAGAAAACTGAAATCGGATCCATCAAACTTTCCAATTCCAATCTTTGAAATTTCCAT
CTTCACAGATTGTGGTGAATCTCGCCCCGCTCTAATACCAGTTTCTTCCCTCTTAAGAAGCGAGGATGTGAGTGAGGACAAAACATGTTGGAAGGACTCGTGTTGGTCTG
TGGGGATAATCTTCCCTCTTAAGAAGCGAGGAGGCGTGACAATTAAGAAGCGAGAAGTAGGTAACATGACCATGTCACAAGGGATGCAAGAGAATGTCGGGATAGTCTAC
ACTCTTAAAAAGCAAGGAGTAGGTAACGTGACCATGTCGCAGGGGATGCAAGGGAATGTCGAGGCCACCAAGTGGTCAATCTAG
Protein sequenceShow/hide protein sequence
MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSNYGSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFS
IESKTLWCKRYEARKTRFRKLKSDPSNFPIPIFEISIFTDCGESRPALIPVSSLLRSEDVSEDKTCWKDSCWSVGIIFPLKKRGGVTIKKREVGNMTMSQGMQENVGIVY
TLKKQGVGNVTMSQGMQGNVEATKWSI