; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24170 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24170
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLate cornified envelope protein 1E
Genome locationCarg_Chr06:6289291..6289831
RNA-Seq ExpressionCarg24170
SyntenyCarg24170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597027.1 hypothetical protein SDJN03_10207, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5797.35Show/hide
Query:  MASHH--PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRV
        MASHH  PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGE AEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRV
Subjt:  MASHH--PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRV

Query:  APRRYKLLKDVMC
        APRRYKLLKDVMC
Subjt:  APRRYKLLKDVMC

KAG7028505.1 hypothetical protein SDJN02_09686, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-60100Show/hide
Query:  MASHHPLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAP
        MASHHPLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAP
Subjt:  MASHHPLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAP

Query:  RRYKLLKDVMC
        RRYKLLKDVMC
Subjt:  RRYKLLKDVMC

XP_022974249.1 uncharacterized protein LOC111472884 isoform X1 [Cucurbita maxima]1.3e-5491.53Show/hide
Query:  MASHH------PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQ-KSSGQDKRERNSGGM
        MASHH      PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGE AEAIE CDWCRCERRCGRRGSAARK GVASQ KSSGQDKRERNSGGM
Subjt:  MASHH------PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQ-KSSGQDKRERNSGGM

Query:  PSPRVAPRRYKLLKDVMC
        PSPRVAPRRYKLLKDVMC
Subjt:  PSPRVAPRRYKLLKDVMC

XP_022974251.1 uncharacterized protein LOC111472884 isoform X2 [Cucurbita maxima]5.1e-5692.31Show/hide
Query:  MASHH------PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMP
        MASHH      PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGE AEAIE CDWCRCERRCGRRGSAARK GVASQKSSGQDKRERNSGGMP
Subjt:  MASHH------PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMP

Query:  SPRVAPRRYKLLKDVMC
        SPRVAPRRYKLLKDVMC
Subjt:  SPRVAPRRYKLLKDVMC

XP_023540879.1 uncharacterized protein LOC111801126 [Cucurbita pepo subsp. pepo]3.0e-5696.4Show/hide
Query:  MASHHPLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAP
        MASHH  PLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGE+AEAIE CDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAP
Subjt:  MASHHPLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAP

Query:  RRYKLLKDVMC
        RRYKLLKDVMC
Subjt:  RRYKLLKDVMC

TrEMBL top hitse value%identityAlignment
A0A0A0L5P1 Uncharacterized protein3.2e-2764.42Show/hide
Query:  PPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYY-GEMAEA-IEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAPRRYKLLK
        PP+CCLCGDVGFPA LFRCT CS+RFQHSYCSNYY GE  +A I  CDWCR E+R  R   A+      SQKS+   +R  ++ G+PSPR APRRYKLLK
Subjt:  PPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYY-GEMAEA-IEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAPRRYKLLK

Query:  DVMC
        DVMC
Subjt:  DVMC

A0A5D3DB67 Uncharacterized protein1.2e-2663.46Show/hide
Query:  PPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYY-GEMAEA-IEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAPRRYKLLK
        PP+CCLCGDVGFPANLFRCT CS+RFQHSYCSNYY GE  +A I  CDWCR E+R  R  + A      SQK     +   ++ G+PSPR APRRYKLLK
Subjt:  PPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYY-GEMAEA-IEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAPRRYKLLK

Query:  DVMC
        DVMC
Subjt:  DVMC

A0A6A2YJP5 Uncharacterized protein5.4e-2753.85Show/hide
Query:  LPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQ--------------KSSGQDKRERNSGGMP
        L  VCC+CGDVGFP  +FRC  C HRFQHSYCSNYY E AE +E CDWCR E R  R+GS ++KS   ++              K  G D++ ++S G P
Subjt:  LPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQ--------------KSSGQDKRERNSGGMP

Query:  SPRVAPRRYKLLKDVMC
        SPR + RRYKLLKDVMC
Subjt:  SPRVAPRRYKLLKDVMC

A0A6J1IAU2 uncharacterized protein LOC111472884 isoform X22.5e-5692.31Show/hide
Query:  MASHH------PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMP
        MASHH      PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGE AEAIE CDWCRCERRCGRRGSAARK GVASQKSSGQDKRERNSGGMP
Subjt:  MASHH------PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMP

Query:  SPRVAPRRYKLLKDVMC
        SPRVAPRRYKLLKDVMC
Subjt:  SPRVAPRRYKLLKDVMC

A0A6J1IH20 uncharacterized protein LOC111472884 isoform X16.1e-5591.53Show/hide
Query:  MASHH------PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQ-KSSGQDKRERNSGGM
        MASHH      PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGE AEAIE CDWCRCERRCGRRGSAARK GVASQ KSSGQDKRERNSGGM
Subjt:  MASHH------PLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQ-KSSGQDKRERNSGGM

Query:  PSPRVAPRRYKLLKDVMC
        PSPRVAPRRYKLLKDVMC
Subjt:  PSPRVAPRRYKLLKDVMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein8.0e-2344.62Show/hide
Query:  VCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRER-----------------------
        VCC+CGDVGF   LF C  C  RFQHSYCSNYYG+ AE  E CDWCR + R  +  + AR  G +S+K S   K E                        
Subjt:  VCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRER-----------------------

Query:  -------NSGGMPSPRVAPRRYKLLKDVMC
               + GG+ SP+ A RRYKLLKDVMC
Subjt:  -------NSGGMPSPRVAPRRYKLLKDVMC

AT3G60520.1 unknown protein2.3e-2244.72Show/hide
Query:  VCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQK-----------------------SSGQDKRER
        VCC+CGDVGF   LF C+ C +RFQHSYCS+YY E A+ I+ CDWC+CE +  R G+    +G +S++                       SS     ++
Subjt:  VCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQK-----------------------SSGQDKRER

Query:  NSGGMPSPRVAPRRYKLLKDVMC
           G+PSPR A RRYKLLKDVMC
Subjt:  NSGGMPSPRVAPRRYKLLKDVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACATCATCCTCTTCCTCTTCCTCCCGTATGTTGCTTGTGCGGCGATGTCGGCTTTCCGGCCAACCTCTTCCGCTGCACCCTCTGCTCTCACCGGTTCCAACA
CTCTTATTGCAGTAACTATTACGGCGAAATGGCAGAGGCTATTGAAGCCTGTGATTGGTGCAGATGTGAACGGAGATGCGGCCGCCGTGGCTCTGCGGCAAGGAAGTCTG
GCGTGGCATCCCAAAAGAGCTCCGGTCAGGATAAAAGAGAAAGAAATTCCGGTGGAATGCCGTCGCCTCGGGTTGCTCCACGGCGGTACAAGCTTCTCAAGGATGTTATG
TGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCACATCATCCTCTTCCTCTTCCTCCCGTATGTTGCTTGTGCGGCGATGTCGGCTTTCCGGCCAACCTCTTCCGCTGCACCCTCTGCTCTCACCGGTTCCAACA
CTCTTATTGCAGTAACTATTACGGCGAAATGGCAGAGGCTATTGAAGCCTGTGATTGGTGCAGATGTGAACGGAGATGCGGCCGCCGTGGCTCTGCGGCAAGGAAGTCTG
GCGTGGCATCCCAAAAGAGCTCCGGTCAGGATAAAAGAGAAAGAAATTCCGGTGGAATGCCGTCGCCTCGGGTTGCTCCACGGCGGTACAAGCTTCTCAAGGATGTTATG
TGTTAA
Protein sequenceShow/hide protein sequence
MASHHPLPLPPVCCLCGDVGFPANLFRCTLCSHRFQHSYCSNYYGEMAEAIEACDWCRCERRCGRRGSAARKSGVASQKSSGQDKRERNSGGMPSPRVAPRRYKLLKDVM
C