CuGenDBv2

Gene ID	Carg24175
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like
Genome location	Carg_Chr06:6238499..6238723
RNA-Seq Expression	Carg24175
Synteny	Carg24175
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR012576 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7028500.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.7e-35

100

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Query:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
Subjt:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

XP_008460580.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumis melo]

3.4e-32

93.24

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Query:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        MANKPLGSTGEFFRR DEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSS HHH+DASSATH
Subjt:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

XP_022950932.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita moschata]

2.2e-34

98.65

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Query:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSS HHHADASSATH
Subjt:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

XP_022974255.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita maxima]

4.8e-34

97.3

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Query:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        MANKPLGSTGEFFRRTDEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSS HHHADASSATH
Subjt:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

XP_023540348.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita pepo subsp. pepo]

7.0e-33

94.59

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Query:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        MANKPLGSTGEFFRRTDEWRKHP L+NQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSS HHHAD SSATH
Subjt:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KR92 Uncharacterized protein

2.8e-32

93.24

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Query:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        MANKPLGSTGEFFRR DEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSS HHH++ASSATH
Subjt:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

A0A1S3CD83 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B

1.7e-32

93.24

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Query:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        MANKPLGSTGEFFRR DEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSS HHH+DASSATH
Subjt:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

A0A6J1GG90 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

1.0e-34

98.65

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Query:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSS HHHADASSATH
Subjt:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

A0A6J1IDH2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

2.3e-34

97.3

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Query:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        MANKPLGSTGEFFRRTDEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSS HHHADASSATH
Subjt:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

A0A6J1KDK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

2.8e-32

93.24

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Query:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        MANKPLGSTGEFFRR DEWRKHP L+NQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSS HHHADASSATH
Subjt:  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

SwissProt top hits

e value

%identity

Alignment

O64725 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A

1.4e-20

69.35

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Query:  KPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHH
        KPLG+TGEFFRR DEWRKHPMLSNQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS   H
Subjt:  KPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHH

Q9M9R9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B

6.1e-24

67.61

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Query:  KPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        KPLG+TGEFFRR DEWRKHPMLSNQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S HHH + ++ +H
Subjt:  KPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

Arabidopsis top hits

e value

%identity

Alignment

AT1G14450.1 NADH dehydrogenase (ubiquinone)s

4.4e-25

67.61

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Query:  KPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH
        KPLG+TGEFFRR DEWRKHPMLSNQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S HHH + ++ +H
Subjt:  KPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

AT2G02510.1 NADH dehydrogenase (ubiquinone)s

1.0e-21

69.35

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Query:  KPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHH
        KPLG+TGEFFRR DEWRKHPMLSNQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS   H
Subjt:  KPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHH

Sequences

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CDS sequence

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ATGGCGAATAAGCCTTTGGGATCGACTGGAGAGTTCTTCAGGAGGACAGACGAGTGGAGGAAGCATCCGATGCTCTCCAATCAGTTCCGACATGCCACTCCTGGCCTCGG
CATCGCTCTCGTTGCTTTCGGCATCTACCTTGTCGGCGAGCAAGTATATAACAGGATCCATTCTCCTTCTTCCTCTCGCCATCACCATGCTGATGCTTCCTCCGCCACCC
ATTAA

mRNA sequence

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Protein sequence

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MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSRHHHADASSATH

Carg24175 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome