; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24193 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24193
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding KH domain-containing protein PEPPER-like
Genome locationCarg_Chr12:8465722..8470753
RNA-Seq ExpressionCarg24193
SyntenyCarg24193
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0009299 - mRNA transcription (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048467 - gynoecium development (biological process)
GO:0048577 - negative regulation of short-day photoperiodism, flowering (biological process)
GO:0048579 - negative regulation of long-day photoperiodism, flowering (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586109.1 RNA-binding KH domain-containing protein PEPPER, partial [Cucurbita argyrosperma subsp. sororia]8.6e-12098.69Show/hide
Query:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
        MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
Subjt:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG

Query:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
        DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
Subjt:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA

Query:  SVRVLSGDEMPFYAGPDERMVELAGRNLK
        SVRVLSGDEMPFYAGPDERMVEL G  LK
Subjt:  SVRVLSGDEMPFYAGPDERMVELAGRNLK

KAG7020933.1 RNA-binding KH domain-containing protein PEPPER [Cucurbita argyrosperma subsp. argyrosperma]9.7e-132100Show/hide
Query:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
        MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
Subjt:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG

Query:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
        DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
Subjt:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA

Query:  SVRVLSGDEMPFYAGPDERMVELAGRNLKGSQGSRGSGGPPKEVFS
        SVRVLSGDEMPFYAGPDERMVELAGRNLKGSQGSRGSGGPPKEVFS
Subjt:  SVRVLSGDEMPFYAGPDERMVELAGRNLKGSQGSRGSGGPPKEVFS

XP_022938096.1 RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata]2.0e-11696.07Show/hide
Query:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
        MATNTTTENGSTDADALNSS QLAFEAAPEPDSTEA GAES IDPSNQDYLSAPASDS+PHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
Subjt:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG

Query:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
        DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAP SPAMDAVLR+FKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
Subjt:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA

Query:  SVRVLSGDEMPFYAGPDERMVELAGRNLK
        SVRVLSGDEMPFYAGPDERMVEL G  LK
Subjt:  SVRVLSGDEMPFYAGPDERMVELAGRNLK

XP_022965514.1 RNA-binding KH domain-containing protein PEPPER-like [Cucurbita maxima]3.0e-11796.94Show/hide
Query:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
        MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQ YLSAPASDSVPHESPNHA ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
Subjt:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG

Query:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
        DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLR+FKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
Subjt:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA

Query:  SVRVLSGDEMPFYAGPDERMVELAGRNLK
        SVRVLSGDEMPFYAGPDERM+EL G  LK
Subjt:  SVRVLSGDEMPFYAGPDERMVELAGRNLK

XP_023538336.1 RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo]2.0e-11696.51Show/hide
Query:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
        MATN TTENGSTDADALNSSPQLA EAA EPDSTEAGGAESDIDPSNQDYLSAPASD VPHESPNHAGASDKKWPGWPGDCVFR+IVPVVKVGSIIGRRG
Subjt:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG

Query:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
        DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
Subjt:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA

Query:  SVRVLSGDEMPFYAGPDERMVELAGRNLK
        SVRVLSGDEMPFYAGPDERMVEL G  LK
Subjt:  SVRVLSGDEMPFYAGPDERMVELAGRNLK

TrEMBL top hitse value%identityAlignment
A0A6J1D9V1 RNA-binding KH domain-containing protein PEPPER1.5e-10184.48Show/hide
Query:  MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIG
        MATN   ENGSTDA A+NS+PQ   L   AA E DSTEAGGAESD+DPSN DYLS PASDS   E+ NH G+SDKKWPGWPGDCVFRLIVPVVKVGSIIG
Subjt:  MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIG

Query:  RRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQES
        R+GDLIKK+CEET+ARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAV+R+FKRVSGFSENED+ KASFCS+RLLVASTQAINLIGKQGSLIKSIQES
Subjt:  RRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQES

Query:  TGASVRVLSGDEMPFYAGPDERMVELAGRNLK
        TGASVRVLSGDEMPFYAG DERMVEL G +LK
Subjt:  TGASVRVLSGDEMPFYAGPDERMVELAGRNLK

A0A6J1EV22 RNA-binding KH domain-containing protein PEPPER-like3.5e-10385.84Show/hide
Query:  MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPH-ESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSII
        MATNT T+NGSTDA+ALN +P+   LA  AA EPDS EAGGAESD+DPSNQDYLSAPASDS  H ESPNH  ASDKKWPGWPGDCVFRLIVPVVKVGSII
Subjt:  MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPH-ESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSII

Query:  GRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQE
        GR+GDLIKK+CEETRARIRVLDGAVGTPDRVVLISGKE+PEAPLSPAMDAV+R+FKRV  FSENEDEAK SFCS+RLLVASTQAINLIGKQGSLIKSIQE
Subjt:  GRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQE

Query:  STGASVRVLSGDEMPFYAGPDERMVELAGRNLK
        STGAS+RVLSGDEMPFYAG DERMVEL G +LK
Subjt:  STGASVRVLSGDEMPFYAGPDERMVELAGRNLK

A0A6J1FC72 RNA-binding KH domain-containing protein PEPPER-like9.6e-11796.07Show/hide
Query:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
        MATNTTTENGSTDADALNSS QLAFEAAPEPDSTEA GAES IDPSNQDYLSAPASDS+PHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
Subjt:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG

Query:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
        DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAP SPAMDAVLR+FKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
Subjt:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA

Query:  SVRVLSGDEMPFYAGPDERMVELAGRNLK
        SVRVLSGDEMPFYAGPDERMVEL G  LK
Subjt:  SVRVLSGDEMPFYAGPDERMVELAGRNLK

A0A6J1HR76 RNA-binding KH domain-containing protein PEPPER-like1.5e-11796.94Show/hide
Query:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
        MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQ YLSAPASDSVPHESPNHA ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG
Subjt:  MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRG

Query:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
        DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLR+FKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA
Subjt:  DLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA

Query:  SVRVLSGDEMPFYAGPDERMVELAGRNLK
        SVRVLSGDEMPFYAGPDERM+EL G  LK
Subjt:  SVRVLSGDEMPFYAGPDERMVELAGRNLK

A0A6J1K7W7 RNA-binding KH domain-containing protein PEPPER-like3.5e-10385.84Show/hide
Query:  MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPH-ESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSII
        MATNT T+NGSTDA+ALN +P+   LA  AA EPDS EAGGAESD+DPSNQDYLSAPASDS  H ESPNH  ASDKKWPGWPGDCVFRLIVPVVKVGSII
Subjt:  MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPH-ESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSII

Query:  GRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQE
        GR+GDLIKK+CEETRARIRVLDGAVGTPDRVVLISGKE+PEAPLSPAMDAV+R+FKRV  FSENEDEAK SFCS+RLLVASTQAINLIGKQGSLIKSIQE
Subjt:  GRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQE

Query:  STGASVRVLSGDEMPFYAGPDERMVELAGRNLK
        STGAS+RVLSGDEMPFYAG DERMVEL G +LK
Subjt:  STGASVRVLSGDEMPFYAGPDERMVELAGRNLK

SwissProt top hitse value%identityAlignment
F4KDN0 KH domain-containing protein HEN43.9e-1427.03Show/hide
Query:  DCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENE--DEAKASFCSVRLLVAS
        D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E PE   SPA  A++ IF R+   + N+  D    S  + RL+V +
Subjt:  DCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENE--DEAKASFCSVRLLVAS

Query:  TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG
        +Q   ++GK G ++  ++++TGA++++L  ++ P     ++++V++ G
Subjt:  TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG

Q15365 Poly(rC)-binding protein 11.5e-1335.66Show/hide
Query:  RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVL-RIFKRVSGFSENEDEAKASFCSVRLLVASTQAIN
        RL++   +VGSIIG++G+ +K+I EE+ ARI + +G    P+R++ ++G   P   +  A   ++ ++ + ++    N   A     ++RL+V +TQ  +
Subjt:  RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVL-RIFKRVSGFSENEDEAKASFCSVRLLVASTQAIN

Query:  LIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG
        LIGK G  IK I+ESTGA V+V +GD +P      ER + +AG
Subjt:  LIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG

Q5E9A3 Poly(rC)-binding protein 11.5e-1335.66Show/hide
Query:  RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVL-RIFKRVSGFSENEDEAKASFCSVRLLVASTQAIN
        RL++   +VGSIIG++G+ +K+I EE+ ARI + +G    P+R++ ++G   P   +  A   ++ ++ + ++    N   A     ++RL+V +TQ  +
Subjt:  RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVL-RIFKRVSGFSENEDEAKASFCSVRLLVASTQAIN

Query:  LIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG
        LIGK G  IK I+ESTGA V+V +GD +P      ER + +AG
Subjt:  LIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG

Q9SR13 Flowering locus K homology domain2.8e-4142.62Show/hide
Query:  NTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD-------------SVPHESPNHAGASDKKWPGWPGDCVFRLIVPVV
        N   ++ S D        Q  F+   E        A+ D+   N D +     D             S P E     G  +K+WPGWPG+ VFR++VP  
Subjt:  NTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD-------------SVPHESPNHAGASDKKWPGWPGDCVFRLIVPVV

Query:  KVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKR-VSGFSENEDEA-KASFCSVRLLVASTQAINLIGKQG
        KVGSIIGR+GD+IKKI EETRARI++LDG  GT +R V++SGKEEPE+ L P+MD +LR+  R V G      +A   S  S RLLV ++QA +LIGKQG
Subjt:  KVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKR-VSGFSENEDEA-KASFCSVRLLVASTQAINLIGKQG

Query:  SLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG
          +K+IQE++   VRVL  +++P +A  D+R+VE+ G
Subjt:  SLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG

Q9SZH4 RNA-binding KH domain-containing protein PEPPER1.5e-6370.59Show/hide
Query:  PNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDE
        P+   +++++WPGWPGDCVFR+IVPV KVG+IIGR+GD IKK+CEETRARI+VLDG V TPDR+VLISGKEEPEA +SPAMDAVLR+F+RVSG  +N+D+
Subjt:  PNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDE

Query:  ----AKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK
            A + F SVRLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+L G  LK
Subjt:  ----AKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK

Arabidopsis top hitse value%identityAlignment
AT1G51580.1 RNA-binding KH domain-containing protein2.2e-1730.85Show/hide
Query:  PHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSE
        P+  P   G  ++  P    +  FRL+ P  KVGS+IG+ G +++ +  E+ A I+V D    + +R+++IS +E  E   S A D V+R+  R+     
Subjt:  PHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSE

Query:  NEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLKGSQGS-------------------RGSGGP
            A  +    RLLV S     L+GK G LI  ++ +TGAS+RV + D+   Y    + +V++ G NLK  Q +                   +G GGP
Subjt:  NEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLKGSQGS-------------------RGSGGP

Query:  P
        P
Subjt:  P

AT3G04610.1 RNA-binding KH domain-containing protein2.0e-4242.62Show/hide
Query:  NTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD-------------SVPHESPNHAGASDKKWPGWPGDCVFRLIVPVV
        N   ++ S D        Q  F+   E        A+ D+   N D +     D             S P E     G  +K+WPGWPG+ VFR++VP  
Subjt:  NTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD-------------SVPHESPNHAGASDKKWPGWPGDCVFRLIVPVV

Query:  KVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKR-VSGFSENEDEA-KASFCSVRLLVASTQAINLIGKQG
        KVGSIIGR+GD+IKKI EETRARI++LDG  GT +R V++SGKEEPE+ L P+MD +LR+  R V G      +A   S  S RLLV ++QA +LIGKQG
Subjt:  KVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKR-VSGFSENEDEA-KASFCSVRLLVASTQAINLIGKQG

Query:  SLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG
          +K+IQE++   VRVL  +++P +A  D+R+VE+ G
Subjt:  SLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG

AT4G26000.1 RNA-binding KH domain-containing protein1.1e-6470.59Show/hide
Query:  PNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDE
        P+   +++++WPGWPGDCVFR+IVPV KVG+IIGR+GD IKK+CEETRARI+VLDG V TPDR+VLISGKEEPEA +SPAMDAVLR+F+RVSG  +N+D+
Subjt:  PNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDE

Query:  ----AKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK
            A + F SVRLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+L G  LK
Subjt:  ----AKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK

AT5G15270.1 RNA-binding KH domain-containing protein5.0e-1735.21Show/hide
Query:  RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINL
        RL+ PV  + S+IG+ G LI ++ +ETRA I+V        D ++ IS +E  E   SP ++AV+R+  + S   E  D    SF + RLLV S++   +
Subjt:  RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINL

Query:  IGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG
        +GK G++I  ++  T A++R+L  + +P  A  D+ MV+++G
Subjt:  IGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG

AT5G15270.2 RNA-binding KH domain-containing protein5.0e-1735.21Show/hide
Query:  RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINL
        RL+ PV  + S+IG+ G LI ++ +ETRA I+V        D ++ IS +E  E   SP ++AV+R+  + S   E  D    SF + RLLV S++   +
Subjt:  RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINL

Query:  IGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG
        +GK G++I  ++  T A++R+L  + +P  A  D+ MV+++G
Subjt:  IGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCAACACAACTACAGAGAATGGCTCCACTGATGCCGACGCCCTCAATTCAAGCCCCCAACTTGCCTTTGAAGCTGCTCCCGAACCGGACTCTACGGAAGCCGG
TGGCGCCGAATCCGACATTGATCCCTCTAACCAAGACTATTTATCGGCACCCGCTTCGGATTCTGTACCTCACGAAAGTCCCAATCATGCTGGCGCTTCCGATAAAAAGT
GGCCTGGATGGCCCGGAGACTGCGTCTTCCGGCTTATTGTACCGGTCGTTAAAGTCGGCAGCATTATTGGGCGCAGGGGCGATCTTATCAAGAAGATCTGTGAGGAAACT
AGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTCGTGCTAATTTCAGGAAAGGAAGAGCCTGAGGCACCCCTTTCCCCTGCAATGGATGCAGT
TTTAAGAATCTTTAAACGTGTGTCTGGATTTTCTGAGAATGAAGATGAGGCTAAAGCTTCATTCTGTTCGGTCCGGTTACTGGTGGCATCAACTCAAGCAATCAATCTAA
TTGGAAAGCAGGGTTCATTAATCAAATCCATACAGGAGAGTACAGGGGCTTCTGTGAGAGTTTTATCAGGAGATGAGATGCCATTCTATGCTGGTCCGGATGAGAGAATG
GTGGAACTTGCAGGGAGAAACCTTAAAGGTTCTCAAGGCTCTAGAGGCAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGA
mRNA sequenceShow/hide mRNA sequence
TTTAAAATTTTATTATTTCAATAATTTACAAAAATAAAAAGAAAAAAAGAAAAAAGAAAAAAGAAAAAAAAAACCTGCATTTCCTTACTTTCTTCCTCTCTTCCTTCGTC
CTCTTTAAACCTCTGAAAATCTTAACCCTAACTTCTTCCTCCTTCTTCATCCTTCTTCATCTTCCTCCATGGCCACCAACACAACTACAGAGAATGGCTCCACTGATGCC
GACGCCCTCAATTCAAGCCCCCAACTTGCCTTTGAAGCTGCTCCCGAACCGGACTCTACGGAAGCCGGTGGCGCCGAATCCGACATTGATCCCTCTAACCAAGACTATTT
ATCGGCACCCGCTTCGGATTCTGTACCTCACGAAAGTCCCAATCATGCTGGCGCTTCCGATAAAAAGTGGCCTGGATGGCCCGGAGACTGCGTCTTCCGGCTTATTGTAC
CGGTCGTTAAAGTCGGCAGCATTATTGGGCGCAGGGGCGATCTTATCAAGAAGATCTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCT
GATCGCGTCGTGCTAATTTCAGGAAAGGAAGAGCCTGAGGCACCCCTTTCCCCTGCAATGGATGCAGTTTTAAGAATCTTTAAACGTGTGTCTGGATTTTCTGAGAATGA
AGATGAGGCTAAAGCTTCATTCTGTTCGGTCCGGTTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAGGGTTCATTAATCAAATCCATACAGGAGAGTA
CAGGGGCTTCTGTGAGAGTTTTATCAGGAGATGAGATGCCATTCTATGCTGGTCCGGATGAGAGAATGGTGGAACTTGCAGGGAGAAACCTTAAAGGTTCTCAAGGCTCT
AGAGGCAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTTTCAATACACCTGCCTCACAAGATCGCCAAACGGATGCCT
GGGCTGACAAGTCCTCACTTCTTTCTGCATCTCAAAGTGTAATTTCCACCGAGTATCCTCCATCTTCAAAAAGAGAATCTCTGTTTCTTGACCGAGAAACTCATCTTGAT
TCTCATATTTCATCCTCTGGTATTTCTCTCTATGGACCAGATCGAGTGCTTCCTGCAATTCGATCATCAGGTGTTGGTCGCTCCGGTGTGCCTATTGTCACTCAGGTCAC
GCAGACAATGCAAATCCCGTTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAGCAAATATCGCATTCATCCGTCGCAATAGTGGTGCAATCTTAACCATACAAGAGA
GCAGGGGATTACCGGATGAAATCACTGTGGAAATAAAAGGCACTTCCTCACAAGTTCAGATGGCTCAACAATTAATTCAGGTAATATTTAATTTCCCCGTTTGACTATTA
ACTTTCTGGTTATTGCTTGTTACGGTCCATAGCGTTGCGCTGCGATACTCTGTTTCCCATGTCATGCAAAAAGTTACTTATATTTCATTGTACAACTGTAACGGCCCAGA
TCCACCGCTAGCAGATATTGTCATCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAAAGGTTTCCACTCTCTTATAAGGGTGTTT
TGTTCT
Protein sequenceShow/hide protein sequence
MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEET
RARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERM
VELAGRNLKGSQGSRGSGGPPKEVFS