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Carg24203 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24203
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB3 domain-containing protein At2g31420-like
Genome locationCarg_Chr12:8371737..8372447
RNA-Seq ExpressionCarg24203
SyntenyCarg24203
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586099.1 hypothetical protein SDJN03_18832, partial [Cucurbita argyrosperma subsp. sororia]1.4e-6482.99Show/hide
Query:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSF
        +PT MRK+IEDMHGYNLQ+VI+K+LI+ DMN+K GR+FF+IK +FFDFLTP EKE+LNDANGV+EVKIVDEAQRVSPM LTKGKIKE DVY FTTHWNSF
Subjt:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSF

Query:  VDKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL
        VDKNCLK G+LIQLWSFRRVRLVDIDNEIFTSDLYFALNT+DGR +L
Subjt:  VDKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL

KAG6586100.1 hypothetical protein SDJN03_18833, partial [Cucurbita argyrosperma subsp. sororia]7.0e-7798.63Show/hide
Query:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFV
        MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFV
Subjt:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFV

Query:  DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL
        DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGR +L
Subjt:  DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL

KAG7020923.1 hypothetical protein SDJN02_17611, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-79100Show/hide
Query:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFV
        MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFV
Subjt:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFV

Query:  DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVLE
        DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVLE
Subjt:  DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVLE

XP_022938317.1 B3 domain-containing protein At2g31420-like [Cucurbita moschata]1.6e-7697.95Show/hide
Query:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFV
        MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIK+QDVYFFTTHWNSFV
Subjt:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFV

Query:  DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL
        DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGR +L
Subjt:  DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL

XP_022969589.1 B3 domain-containing protein At2g31420-like [Cucurbita maxima]8.0e-6586.71Show/hide
Query:  MRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFVDKN
        MRKQIEDMHGYNLQ+VI+K+LI+ DMN+K GR+FF+IK +FFDFLTP EKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKE DVY FTTHWNSFVDKN
Subjt:  MRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFVDKN

Query:  CLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL
        CLK G+LIQLWSFRRVRLVDIDNEIFTSDLYFALNT+DGR +L
Subjt:  CLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL

TrEMBL top hitse value%identityAlignment
A0A6J1CSV9 B3 domain-containing protein At2g31420-like8.8e-1742.86Show/hide
Query:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELL-------NDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFF
        MP  +R +I ++ GY++Q+VI KRL + D+N   GRL   IKK+  DF T  EK+LL       N+ NGV  + I+D   R S + L K KI  +++Y  
Subjt:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELL-------NDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFF

Query:  TTHWNSFVDKNCLKLGHLIQLWSFRR
         + WNS   KN L+ G  IQLWSFR+
Subjt:  TTHWNSFVDKNCLKLGHLIQLWSFRR

A0A6J1FDQ3 B3 domain-containing protein At2g31420-like7.5e-7797.95Show/hide
Query:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFV
        MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIK+QDVYFFTTHWNSFV
Subjt:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFV

Query:  DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL
        DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGR +L
Subjt:  DKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL

A0A6J1FIJ8 B3 domain-containing protein At2g31420-like2.1e-6383.22Show/hide
Query:  MRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFVDKN
        MRK+IEDMHGYNLQ+VI+K+LI+ DMN+K GR+FF+IK +FFDFLTP EKE+LNDANGV+EVKIVDEAQRVSPMFLTKGKI+E DVY FTTHWNSFVDKN
Subjt:  MRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFVDKN

Query:  CLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL
        CLK G+LIQLWSFRRVRL+DIDNEIFTSDLYFALNT+DGR +L
Subjt:  CLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL

A0A6J1FJF6 B3 domain-containing protein At1g05930-like4.0e-6281.63Show/hide
Query:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSF
        MPT MRKQIE+M GYNLQLVIHK+LIE DMNEK GRLF  IKK+ FDF+TP+E++LLNDANGVMEVKI+DE QRVSPMFLTKGKI+E D Y  TTHWNSF
Subjt:  MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSF

Query:  VDKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL
        V KNCLK+GHLIQLWSFRRVRLVDI+NEIFTSDLYFALNT+DGR  L
Subjt:  VDKNCLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL

A0A6J1I325 B3 domain-containing protein At2g31420-like3.9e-6586.71Show/hide
Query:  MRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFVDKN
        MRKQIEDMHGYNLQ+VI+K+LI+ DMN+K GR+FF+IK +FFDFLTP EKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKE DVY FTTHWNSFVDKN
Subjt:  MRKQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFVDKN

Query:  CLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL
        CLK G+LIQLWSFRRVRLVDIDNEIFTSDLYFALNT+DGR +L
Subjt:  CLKLGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVL

SwissProt top hitse value%identityAlignment
Q9SIC7 B3 domain-containing protein At2g314204.8e-0427.2Show/hide
Query:  MPTEMRKQIEDMHGYNLQLVIHKR-LIEADMNE-KGRLFFRIKKM-FFDFLTPNEKELLND-----ANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFF
        +P  + K +   +GY+ +L+I +R L   D+ + +G L   + K+   DFLT +E   L++         ++V +VD       ++L K        Y  
Subjt:  MPTEMRKQIEDMHGYNLQLVIHKR-LIEADMNE-KGRLFFRIKKM-FFDFLTPNEKELLND-----ANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFF

Query:  TTHWNSFVDKNCLKLGHLIQLWSFR
        +  WN+ +DK   K+  +I++WSFR
Subjt:  TTHWNSFVDKNCLKLGHLIQLWSFR

Arabidopsis top hitse value%identityAlignment
AT2G31420.1 Domain of unknown function (DUF313)3.4e-0527.2Show/hide
Query:  MPTEMRKQIEDMHGYNLQLVIHKR-LIEADMNE-KGRLFFRIKKM-FFDFLTPNEKELLND-----ANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFF
        +P  + K +   +GY+ +L+I +R L   D+ + +G L   + K+   DFLT +E   L++         ++V +VD       ++L K        Y  
Subjt:  MPTEMRKQIEDMHGYNLQLVIHKR-LIEADMNE-KGRLFFRIKKM-FFDFLTPNEKELLND-----ANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFF

Query:  TTHWNSFVDKNCLKLGHLIQLWSFR
        +  WN+ +DK   K+  +I++WSFR
Subjt:  TTHWNSFVDKNCLKLGHLIQLWSFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACTGAGATGCGAAAGCAGATCGAGGACATGCATGGATACAATCTCCAATTGGTGATTCATAAGAGATTAATAGAAGCTGATATGAACGAGAAAGGGCGTTTGTT
TTTTCGAATCAAGAAAATGTTCTTCGATTTCCTCACCCCAAATGAGAAGGAGCTCTTGAATGATGCAAACGGTGTCATGGAAGTCAAGATTGTTGATGAGGCTCAAAGGG
TGAGCCCCATGTTCTTGACCAAAGGCAAGATTAAAGAACAGGATGTTTATTTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTGGGCCACCTT
ATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGACATCGACAACGAAATATTCACCTCTGATCTTTACTTCGCCTTGAATACCGTTGATGGTCGATGGGTGCTCGA
GTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACTGAGATGCGAAAGCAGATCGAGGACATGCATGGATACAATCTCCAATTGGTGATTCATAAGAGATTAATAGAAGCTGATATGAACGAGAAAGGGCGTTTGTT
TTTTCGAATCAAGAAAATGTTCTTCGATTTCCTCACCCCAAATGAGAAGGAGCTCTTGAATGATGCAAACGGTGTCATGGAAGTCAAGATTGTTGATGAGGCTCAAAGGG
TGAGCCCCATGTTCTTGACCAAAGGCAAGATTAAAGAACAGGATGTTTATTTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTGGGCCACCTT
ATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGACATCGACAACGAAATATTCACCTCTGATCTTTACTTCGCCTTGAATACCGTTGATGGTCGATGGGTGCTCGA
GTAA
Protein sequenceShow/hide protein sequence
MPTEMRKQIEDMHGYNLQLVIHKRLIEADMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKEQDVYFFTTHWNSFVDKNCLKLGHL
IQLWSFRRVRLVDIDNEIFTSDLYFALNTVDGRWVLE