CuGenDBv2

Gene ID	Carg24205
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cytochrome c oxidase subunit 3
Genome location	Carg_Chr12:8358278..8358532
RNA-Seq Expression	Carg24205
Synteny	Carg24205
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0031966 - mitochondrial membrane (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function)
InterPro domains	IPR000298 - Cytochrome c oxidase subunit III-like IPR013833 - Cytochrome c oxidase, subunit III, 4-helical bundle IPR024791 - Cytochrome c oxidase subunit III IPR035973 - Cytochrome c oxidase subunit III-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AHX81461.1 cytochrome c oxidase subunit 3 [Licania sprucei]

8.4e-27

76.19

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

KAG7020921.1 Cytochrome c oxidase subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.1e-30

100

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Query:  MEYYQAPFTISDSTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDSTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDSTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

QXE45619.1 cytochrome c oxidase subunit 3 [Pachyrhizus erosus]

8.4e-27

76.19

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

XP_022975233.1 uncharacterized protein LOC111474342 [Cucurbita maxima]

8.4e-27

76.19

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

XP_023520730.1 uncharacterized protein LOC111784179 [Cucurbita pepo subsp. pepo]

8.4e-27

76.19

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

TrEMBL top hits

e value

%identity

Alignment

A0A023T2P2 Cytochrome c oxidase subunit 3

4.1e-27

76.19

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

A0A0R0H600 Cytochrome c oxidase subunit 3

4.1e-27

76.19

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

A0A6J1IIM7 Cytochrome c oxidase subunit 3

4.1e-27

76.19

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

E9KZN7 Cytochrome c oxidase subunit 3

4.1e-27

76.19

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

E9P2B2 Cytochrome c oxidase subunit 3

4.1e-27

76.19

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

SwissProt top hits

e value

%identity

Alignment

P08745 Cytochrome c oxidase subunit 3

7.9e-28

73.81

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAP TISDS                    TLF IICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

P14852 Cytochrome c oxidase subunit 3

2.3e-27

71.43

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAP TISDS                    TLFLI+CGIRQYLGHLTK+HHVGFEAAAWYWHFVDVVRLF FVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

P14853 Cytochrome c oxidase subunit 3

9.3e-29

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

P92514 Cytochrome c oxidase subunit 3

9.3e-29

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

Q03227 Cytochrome c oxidase subunit 3

1.0e-27

72.62

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLG +TKEHHVGFEAAAWYWHFVDVVRLF FVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

Arabidopsis top hits

e value

%identity

Alignment

AT2G07687.1 Cytochrome c oxidase, subunit III

6.6e-30

Show/hide

Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

ATMG00730.1 cytochrome c oxidase subunit 3

6.6e-30

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Query:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
        MEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

Sequences

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CDS sequence

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ATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACCAAGGAGCATCACGTTGGCTT
TGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGTATATGA

mRNA sequence

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ATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACCAAGGAGCATCACGTTGGCTT
TGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGTATATGA

Protein sequence

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MEYYQAPFTISDSTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI

Carg24205 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome