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Carg24207 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24207
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S acidic ribosomal protein P3
Genome locationCarg_Chr12:8346777..8347955
RNA-Seq ExpressionCarg24207
SyntenyCarg24207
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR044252 - 60S acidic ribosomal protein P3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148320.1 60S acidic ribosomal protein P3-2 [Cucumis sativus]1.2e-4284.3Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAP-AAEAPA
        MGVFTFVCR SGG+WTANQYSGDLEGSA STY+LQRKLV SALSVDSSGGVQSSFS+++PSSAVFQVI+GG SGGG  +GG AAAAPAGGAAP AAEAPA
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAP-AAEAPA

Query:  PAKEEVKEESDDDDLGFSLFD
          KEEVKEESDD+DLG SLFD
Subjt:  PAKEEVKEESDDDDLGFSLFD

XP_022929782.1 60S acidic ribosomal protein P3-2-like [Cucurbita moschata]2.0e-4284.3Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAP-AAEAPA
        MGVFTF+CR SGG+WTANQYSGDLEGSA STYDLQR LV + LSVD SGGVQSSFSYV+P+SAVFQVIIGG+SGGG I GG AAAAPAGG AP AAEAPA
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAP-AAEAPA

Query:  PAKEEVKEESDDDDLGFSLFD
          KEEVKEESDDDDLGFSLFD
Subjt:  PAKEEVKEESDDDDLGFSLFD

XP_022937950.1 60S acidic ribosomal protein P3 [Cucurbita moschata]6.4e-5299.17Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSG VQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDDDLGFSLFD
        AKEEVKEESDDDDLGFSLFD
Subjt:  AKEEVKEESDDDDLGFSLFD

XP_022969611.1 60S acidic ribosomal protein P3-like [Cucurbita maxima]2.0e-5097.5Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGVFTFVCRKSGGEWTANQYSG LEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGG AAAAPAGGAAPAAEAPA 
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDDDLGFSLFD
        AKEEVKEESDDDDLGFSLFD
Subjt:  AKEEVKEESDDDDLGFSLFD

XP_023537756.1 60S acidic ribosomal protein P3 [Cucurbita pepo subsp. pepo]5.7e-53100Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDDDLGFSLFD
        AKEEVKEESDDDDLGFSLFD
Subjt:  AKEEVKEESDDDDLGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LJB2 Uncharacterized protein5.8e-4384.3Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAP-AAEAPA
        MGVFTFVCR SGG+WTANQYSGDLEGSA STY+LQRKLV SALSVDSSGGVQSSFS+++PSSAVFQVI+GG SGGG  +GG AAAAPAGGAAP AAEAPA
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAP-AAEAPA

Query:  PAKEEVKEESDDDDLGFSLFD
          KEEVKEESDD+DLG SLFD
Subjt:  PAKEEVKEESDDDDLGFSLFD

A0A6J1ENN1 60S acidic ribosomal protein P3-2-like9.9e-4384.3Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAP-AAEAPA
        MGVFTF+CR SGG+WTANQYSGDLEGSA STYDLQR LV + LSVD SGGVQSSFSYV+P+SAVFQVIIGG+SGGG I GG AAAAPAGG AP AAEAPA
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAP-AAEAPA

Query:  PAKEEVKEESDDDDLGFSLFD
          KEEVKEESDDDDLGFSLFD
Subjt:  PAKEEVKEESDDDDLGFSLFD

A0A6J1FI91 60S acidic ribosomal protein P33.1e-5299.17Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSG VQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDDDLGFSLFD
        AKEEVKEESDDDDLGFSLFD
Subjt:  AKEEVKEESDDDDLGFSLFD

A0A6J1HYA3 60S acidic ribosomal protein P3-like9.9e-5197.5Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGVFTFVCRKSGGEWTANQYSG LEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGG AAAAPAGGAAPAAEAPA 
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDDDLGFSLFD
        AKEEVKEESDDDDLGFSLFD
Subjt:  AKEEVKEESDDDDLGFSLFD

A0A6J1KB28 60S acidic ribosomal protein P3-2-like9.9e-4384.3Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAP-AAEAPA
        MGVFTF+CR SGG+WTANQYSGDLEGSA STYDLQR LV + LSVD SGGVQSSFSYV+P+SAVFQVIIGG+SGGG I GG AAAAPAGG AP AAEAPA
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAP-AAEAPA

Query:  PAKEEVKEESDDDDLGFSLFD
          KEEVKEESDDDDLGFSLFD
Subjt:  PAKEEVKEESDDDDLGFSLFD

SwissProt top hitse value%identityAlignment
O24413 60S acidic ribosomal protein P32.7e-2961.98Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGG-IISGGAAAAAPAGGAAPAAEAPA
        MGV+TFVCR +GGEWTA Q+SG++E SAA+ Y+LQR+LVA+A + DS  GVQSSFS V+PSSAVFQVI+G   GG  ++SGG    A A G A AAEAP 
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGG-IISGGAAAAAPAGGAAPAAEAPA

Query:  PAKEEVKEESDDDDLGFSLFD
          K+E ++E  DDD+GFSLFD
Subjt:  PAKEEVKEESDDDDLGFSLFD

P56724 60S acidic ribosomal protein P33.8e-3167.5Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGV+TFVCR SG EWTA Q  G+LE SAA+ Y+LQR+LVA+A + DS+ GVQSSFS VSPSSAVFQVIIG   GG  I GGAAA A +GGAA  A     
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDDDLGFSLFD
         KEE KEES +DDLGFSLFD
Subjt:  AKEEVKEESDDDDLGFSLFD

Q9LVC9 60S acidic ribosomal protein P3-22.4e-3062.18Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGVF+FVC+  GGEWTA Q+ GDLE SA+STYDLQRKLV +ALS DSSGGVQSSFS VSP+SAVF V+IGG  GGG  +GG AAA   GG   AA     
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDDDLGFSLF
         K++ + E ++ D GF LF
Subjt:  AKEEVKEESDDDDLGFSLF

Q9SVZ6 60S acidic ribosomal protein P3-12.3e-2862.81Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGVFTFVC+  GG W+A Q+ G+LE SA+STY+LQRKLV  +LS DSSGGVQSSFS VSP+SAVFQVI+GG  GGG  +GGAA++   GGA  AA AP  
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDD--DLGFSLF
          E+ KEES+++  D GF LF
Subjt:  AKEEVKEESDDD--DLGFSLF

Arabidopsis top hitse value%identityAlignment
AT4G25890.1 60S acidic ribosomal protein family1.6e-2962.81Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGVFTFVC+  GG W+A Q+ G+LE SA+STY+LQRKLV  +LS DSSGGVQSSFS VSP+SAVFQVI+GG  GGG  +GGAA++   GGA  AA AP  
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDD--DLGFSLF
          E+ KEES+++  D GF LF
Subjt:  AKEEVKEESDDD--DLGFSLF

AT5G57290.1 60S acidic ribosomal protein family1.7e-3162.18Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGVF+FVC+  GGEWTA Q+ GDLE SA+STYDLQRKLV +ALS DSSGGVQSSFS VSP+SAVF V+IGG  GGG  +GG AAA   GG   AA     
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDDDLGFSLF
         K++ + E ++ D GF LF
Subjt:  AKEEVKEESDDDDLGFSLF

AT5G57290.2 60S acidic ribosomal protein family4.4e-2774.07Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGG
        MGVF+FVC+  GGEWTA Q+ GDLE SA+STYDLQRKLV +ALS DSSGGVQSSFS VSP+SAVF V+IGG  GGG  +GG
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGG

AT5G57290.3 60S acidic ribosomal protein family2.5e-3062.18Show/hide
Query:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP
        MGVF+FVC+  GGEWTA Q+ GDLE SA+STYDLQRKLV +ALS DSSGGVQSSFS VSP+SAVF V+IGG  GGG  +GG AAA   GG   AA     
Subjt:  MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAP

Query:  AKEEVKEESDDDDLGFSLF
         K++ + E ++ D GF LF
Subjt:  AKEEVKEESDDDDLGFSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTTCACCTTCGTTTGTCGGAAATCCGGTGGCGAGTGGACCGCCAATCAGTACTCAGGCGACCTTGAAGGTTCCGCCGCTTCAACCTATGATCTCCAGAGGAA
GCTCGTTGCGTCTGCTCTCTCTGTCGATTCCTCCGGTGGCGTTCAGTCCTCATTCTCTTACGTTTCTCCCAGCTCCGCCGTTTTTCAGGTGATCATTGGTGGTGCTAGTG
GCGGTGGTATCATTAGTGGTGGAGCAGCGGCAGCCGCCCCTGCTGGAGGAGCTGCACCAGCTGCAGAAGCCCCAGCTCCAGCGAAGGAGGAGGTGAAGGAAGAGAGTGAT
GATGATGACCTTGGCTTTTCACTTTTTGATTAA
mRNA sequenceShow/hide mRNA sequence
AGAACGGCCGCTAGTCCTACGCTCTTATCTTTCTTCTTCGCAATTTGCTTCGATCGAAATTCACGTTCGAAGATCAAAAAATGGGAGTTTTCACCTTCGTTTGTCGGAAA
TCCGGTGGCGAGTGGACCGCCAATCAGTACTCAGGCGACCTTGAAGGTTCCGCCGCTTCAACCTATGATCTCCAGAGGAAGCTCGTTGCGTCTGCTCTCTCTGTCGATTC
CTCCGGTGGCGTTCAGTCCTCATTCTCTTACGTTTCTCCCAGCTCCGCCGTTTTTCAGGTGATCATTGGTGGTGCTAGTGGCGGTGGTATCATTAGTGGTGGAGCAGCGG
CAGCCGCCCCTGCTGGAGGAGCTGCACCAGCTGCAGAAGCCCCAGCTCCAGCGAAGGAGGAGGTGAAGGAAGAGAGTGATGATGATGACCTTGGCTTTTCACTTTTTGAT
TAATTGGTATAATTACTTGTTATTGTTTACCAATCTC
Protein sequenceShow/hide protein sequence
MGVFTFVCRKSGGEWTANQYSGDLEGSAASTYDLQRKLVASALSVDSSGGVQSSFSYVSPSSAVFQVIIGGASGGGIISGGAAAAAPAGGAAPAAEAPAPAKEEVKEESD
DDDLGFSLFD