; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24211 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24211
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLa-related protein 6 isoform 1
Genome locationCarg_Chr12:8312701..8314618
RNA-Seq ExpressionCarg24211
SyntenyCarg24211
Gene Ontology termsGO:0034599 - cellular response to oxidative stress (biological process)
GO:0071470 - cellular response to osmotic stress (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020916.1 hypothetical protein SDJN02_17604 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-100100Show/hide
Query:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
        SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
Subjt:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY

XP_022938204.1 uncharacterized protein LOC111444353 [Cucurbita moschata]3.8e-9999.48Show/hide
Query:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPP ADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
        SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
Subjt:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY

XP_022969609.1 uncharacterized protein LOC111468585 [Cucurbita maxima]2.7e-9797.91Show/hide
Query:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPP AD+PNGLERGNENRLAKLAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
        SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGR EDDDDY
Subjt:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY

XP_023536753.1 uncharacterized protein LOC111798034 [Cucurbita pepo subsp. pepo]2.5e-9899.47Show/hide
Query:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPP ADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDD
        SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDD
Subjt:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDD

XP_038889537.1 uncharacterized protein LOC120079434 isoform X1 [Benincasa hispida]1.1e-7784.62Show/hide
Query:  MSLASSQLSFLSTTLSFS-SAPTPRRSNNILHSFHPIIASKLPPHADDPNG-LERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAA
        MSLASSQLSFLST  SFS S  TPRR+NN+LHS +  ++ KLPP ADDPNG L RG+ENRLAKLAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAA
Subjt:  MSLASSQLSFLSTTLSFS-SAPTPRRSNNILHSFHPIIASKLPPHADDPNG-LERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAA

Query:  PRSSSPRINNNSRTNIYINPRVAPPLVGGY--GYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
        PRSSSPRINNNSRTNIYINPRVAPPLVGGY  GYGVPYY GGWGWSPFSFFAP+P+VAVGIGGGFD+L LFI LGTVAAFVRRF  GR EDDDDY
Subjt:  PRSSSPRINNNSRTNIYINPRVAPPLVGGY--GYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY

TrEMBL top hitse value%identityAlignment
A0A0A0LGT3 Uncharacterized protein3.3e-7277.84Show/hide
Query:  MSLASSQLSFLSTTLSFSSAPTPRRSNN--ILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAA
        MSL SSQL+FLST  SFSS   P R++N  +LHS +P+I+ KLPP + DP    +GNENR+A LAIVTL AGVL+LGSVHDASAAKTGGRVGGQAFRSAA
Subjt:  MSLASSQLSFLSTTLSFSSAPTPRRSNN--ILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAA

Query:  PRSSSPRINNNSRTNIYINPRVAPPLVG-GYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
        PR SSPRINNNSRTNIYINPRVAPPL G GYGYGVPYYGGGWGWSPFSFFAP+P+VAVGIGGG DVL  FI LGTVAAFVRR  G R EDDDDY
Subjt:  PRSSSPRINNNSRTNIYINPRVAPPLVG-GYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY

A0A5A7U097 La-related protein 6 isoform 14.4e-6975.13Show/hide
Query:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSL SSQLSFLST  SFS +P    +  +L+S   +++ KLPP +DDP    +GNENR+AKLAIVTL AG+L+LGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  SSSPRINNNSRTNIYINPRVAPPLVGGY--GYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
         SSPRINNNSRTNIYINPRVAPPLVGGY  GYGVPYY GGWGWSPFSFFAP+P+VAVGIGGG DVL  FI LG+VAAFVR+ LG R  DDDDY
Subjt:  SSSPRINNNSRTNIYINPRVAPPLVGGY--GYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY

A0A6J1DIH1 uncharacterized protein LOC1110208183.1e-7076.5Show/hide
Query:  MSLASSQLSFLSTTLSFSSAPT---PRRSNNILHSFHPIIASKLPPHADDPNGLE----RGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQA
        M+LASSQ SFL+  LS ++A     PRR   +LHS +  ++SKLPP ADDP+G       GNENRLAKLAIVTLAAGVL+LGSVHDASAAKTGGRVGGQA
Subjt:  MSLASSQLSFLSTTLSFSSAPT---PRRSNNILHSFHPIIASKLPPHADDPNGLE----RGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQA

Query:  FRSAAPRSSSPRINNNSRTNIYINPRVAPPLVGGY--GYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
        FRSAAPR SSPRINNNSRTNIYINP VAPPLVGGY  GYGVPYY GGWGWSPFSFFAP PSVAVGIGGGFD+L LFIFLG+VAA VRRF G R +DDDDY
Subjt:  FRSAAPRSSSPRINNNSRTNIYINPRVAPPLVGGY--GYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY

A0A6J1FDE3 uncharacterized protein LOC1114443531.8e-9999.48Show/hide
Query:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPP ADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
        SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
Subjt:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY

A0A6J1I348 uncharacterized protein LOC1114685851.3e-9797.91Show/hide
Query:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPP AD+PNGLERGNENRLAKLAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
        SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGR EDDDDY
Subjt:  SSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54520.1 unknown protein1.7e-0433.08Show/hide
Query:  LAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIG
        L K AI  +  G+L     + A AA +GGR+GG +F      SS  R +++S +  Y  PR + P         PYYG     SPF      P+V  G  
Subjt:  LAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIG

Query:  GGFDVLVLFIFLGTVAAFVRRFLGGRGEDD
        GGF    L +        V  FL  R +DD
Subjt:  GGFDVLVLFIFLGTVAAFVRRFLGGRGEDD

AT5G57345.1 unknown protein1.1e-5158.2Show/hide
Query:  SLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRS
        ++ASS+ SFLS   SF  +  P+ + N+     P        H DD     R NEN+LAKLAI TLA GVL+LGSV DA AAK+GGR+GGQAFRS+APR 
Subjt:  SLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRS

Query:  SSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDD
          PRINN SRTNIY+NP+VAPPL+GGYGYG     GG+GWSPFSFFAP P+VAVG+GGGFD+L+LF+F G  +A  R F   R ++DD+
Subjt:  SSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTGGCCTCATCGCAGCTCAGCTTTCTCTCCACCACCCTCTCCTTCTCCTCCGCCCCCACCCCTCGCCGGTCCAACAACATCCTCCATTCTTTCCATCCTATAAT
CGCCTCTAAACTTCCTCCCCACGCCGATGATCCTAATGGATTAGAGAGGGGAAATGAGAATCGACTAGCGAAGCTTGCGATTGTTACTCTGGCGGCTGGGGTTTTGTCAT
TGGGATCGGTTCATGATGCGTCGGCCGCTAAGACCGGTGGCCGAGTTGGCGGCCAGGCGTTCCGGTCGGCGGCTCCCCGGTCTTCATCGCCGAGAATCAATAACAATTCC
AGGACAAATATCTACATAAACCCGAGAGTAGCGCCTCCTCTAGTAGGTGGGTATGGTTACGGTGTGCCATACTATGGAGGAGGATGGGGATGGTCGCCATTTTCATTCTT
TGCACCAACCCCAAGTGTAGCTGTAGGCATTGGAGGAGGTTTTGATGTTCTTGTGCTCTTCATTTTTCTTGGAACTGTTGCAGCTTTTGTGAGAAGGTTCCTTGGAGGAA
GAGGAGAAGATGATGATGATTATTAA
mRNA sequenceShow/hide mRNA sequence
TCTCCGTTCCTCCATTGAAGTACACTCCAATCTTCCCCTCACCATGTCGTTGGCCTCATCGCAGCTCAGCTTTCTCTCCACCACCCTCTCCTTCTCCTCCGCCCCCACCC
CTCGCCGGTCCAACAACATCCTCCATTCTTTCCATCCTATAATCGCCTCTAAACTTCCTCCCCACGCCGATGATCCTAATGGATTAGAGAGGGGAAATGAGAATCGACTA
GCGAAGCTTGCGATTGTTACTCTGGCGGCTGGGGTTTTGTCATTGGGATCGGTTCATGATGCGTCGGCCGCTAAGACCGGTGGCCGAGTTGGCGGCCAGGCGTTCCGGTC
GGCGGCTCCCCGGTCTTCATCGCCGAGAATCAATAACAATTCCAGGACAAATATCTACATAAACCCGAGAGTAGCGCCTCCTCTAGTAGGTGGGTATGGTTACGGTGTGC
CATACTATGGAGGAGGATGGGGATGGTCGCCATTTTCATTCTTTGCACCAACCCCAAGTGTAGCTGTAGGCATTGGAGGAGGTTTTGATGTTCTTGTGCTCTTCATTTTT
CTTGGAACTGTTGCAGCTTTTGTGAGAAGGTTCCTTGGAGGAAGAGGAGAAGATGATGATGATTATTAA
Protein sequenceShow/hide protein sequence
MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNS
RTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY