CuGenDBv2

Gene ID	Carg24212
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor bHLH146-like
Genome location	Carg_Chr12:8305286..8305689
RNA-Seq Expression	Carg24212
Synteny	Carg24212
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR044660 - Transcription factor IBH1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586090.1 Transcription factor basic helix-loop-helix 146, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-57

97.54

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Query:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR
        MTSLPKISHHHQQHQEQ+FQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKF+RENLER DEEHEEREEHEERKIENGLMKLR
Subjt:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR

Query:  KIVPGGSNGELEEDDLFKQTES
        KIVPGGSNGELEEDDLFKQTES
Subjt:  KIVPGGSNGELEEDDLFKQTES

KAG7020915.1 hypothetical protein SDJN02_17603, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.7e-61

100

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Query:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR
        MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR
Subjt:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR

Query:  KIVPGGSNGELEEDDLFKQTESQCS
        KIVPGGSNGELEEDDLFKQTESQCS
Subjt:  KIVPGGSNGELEEDDLFKQTESQCS

XP_022938205.1 transcription factor bHLH146-like [Cucurbita moschata]

2.8e-58

99.18

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Query:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR
        MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLER DEEHEEREEHEERKIENGLMKLR
Subjt:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR

Query:  KIVPGGSNGELEEDDLFKQTES
        KIVPGGSNGELEEDDLFKQTES
Subjt:  KIVPGGSNGELEEDDLFKQTES

XP_022969610.1 transcription factor bHLH146-like [Cucurbita maxima]

6.6e-52

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Query:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEH---EERKIENGLM
        MTSLPKISHHHQQHQ+QNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQRED NGSNGFG SL  VKFSRENLER DEEHEE EEH   EERKIENGLM
Subjt:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEH---EERKIENGLM

Query:  KLRKIVPGGSNGELEEDDLFKQTES
        KLRKIVPGGSNGELEEDDLFKQTES
Subjt:  KLRKIVPGGSNGELEEDDLFKQTES

XP_023538247.1 transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]

1.9e-51

91.8

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Query:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR
        MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFG SLQ VKFS+ENLER   EHEE EE +E KIENGLMKLR
Subjt:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR

Query:  KIVPGGSNGELEEDDLFKQTES
        KIVPGGSNGELEEDDLFKQTES
Subjt:  KIVPGGSNGELEEDDLFKQTES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJA7 Uncharacterized protein

5.0e-29

66.92

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Query:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQRED---GNGS-NGFGLSLQRV-KFSRENLERGDEE-HEEREEHEERKIEN
        MTSL KISH   Q Q+QNF+KLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+    GNG+ NGF  S+Q V K S+ENL   +E+ H E EE EE ++EN
Subjt:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQRED---GNGS-NGFGLSLQRV-KFSRENLERGDEE-HEEREEHEERKIEN

Query:  GLMKLRKIVPGGSN----GEL-EEDDLFKQTES
        GLMKLRKI+PGG N    G L EEDDL KQTES
Subjt:  GLMKLRKIVPGGSN----GEL-EEDDLFKQTES

A0A1S4DZN3 uncharacterized protein At4g30180

3.8e-29

63.31

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Query:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQRED-----GNGS-NGFGLSLQRV-KFSRENLERGDEEH----EEREEHEE
        MTSL KISH   Q Q+QNFQKLV+FEVDMAMAQSA+EFSWG ALKKKLLQR+D     GNGS NGF  SLQ + K S +NL   +E+H    EE EE EE
Subjt:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQRED-----GNGS-NGFGLSLQRV-KFSRENLERGDEEH----EEREEHEE

Query:  RKIENGLMKLRKIVPGGSNGEL------EEDDLFKQTES
         ++ENGLMKLRKI+PGG +  +      EEDDL KQTES
Subjt:  RKIENGLMKLRKIVPGGSNGEL------EEDDLFKQTES

A0A6J1FJ33 transcription factor bHLH146-like

1.3e-58

99.18

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Query:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR
        MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLER DEEHEEREEHEERKIENGLMKLR
Subjt:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR

Query:  KIVPGGSNGELEEDDLFKQTES
        KIVPGGSNGELEEDDLFKQTES
Subjt:  KIVPGGSNGELEEDDLFKQTES

A0A6J1I0E6 transcription factor bHLH146-like

3.2e-52

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Query:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEH---EERKIENGLM
        MTSLPKISHHHQQHQ+QNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQRED NGSNGFG SL  VKFSRENLER DEEHEE EEH   EERKIENGLM
Subjt:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEH---EERKIENGLM

Query:  KLRKIVPGGSNGELEEDDLFKQTES
        KLRKIVPGGSNGELEEDDLFKQTES
Subjt:  KLRKIVPGGSNGELEEDDLFKQTES

A0A6J1K5R7 transcription factor bHLH146-like

8.8e-26

61.24

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Query:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR
        M SL KIS ++     Q FQKLVKFEVDMAMA+SAT+F+WGNALKKKLLQ +    +NGF  SLQ +KFSRENL        EREE EE K+ENGL KLR
Subjt:  MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLR

Query:  KIVPGGS-------NGELEEDDLFKQTES
        KI+PGG        NG LEE++L KQTES
Subjt:  KIVPGGS-------NGELEEDDLFKQTES

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors

9.0e-07

34.65

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Query:  EQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQR--EDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEE-RKIENGLMKLRKIVPGGSNGELE
        +Q+ ++ VK EVDMA A SA EF+W   L++KLL    +D   ++     +      R +  +G E+H++ +E EE  +I+  L +L+K++PGG    +E
Subjt:  EQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQR--EDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEE-RKIENGLMKLRKIVPGGSNGELE

Query:  E
        E
Subjt:  E

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators

8.5e-05

37.23

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Query:  QKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLRKIVPGGSNGELEE
        ++ VK EVDMA+A SA EF+W   L +KL      N +     S   ++     LER D+E      +EE  IE  L +L+K++PGG    +EE
Subjt:  QKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLRKIVPGGSNGELEE

Sequences

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CDS sequence

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ATGACATCTTTACCCAAAATCTCTCATCATCATCAACAACATCAAGAACAAAATTTTCAGAAGCTTGTGAAGTTTGAGGTTGACATGGCAATGGCTCAATCAGCAACTGA
GTTTTCATGGGGCAATGCTCTTAAAAAGAAGCTTCTTCAAAGAGAAGATGGCAATGGGAGTAATGGGTTTGGTCTCTCTCTCCAAAGGGTGAAATTTTCTCGAGAAAATT
TAGAGAGAGGAGACGAAGAACACGAAGAACGCGAAGAACACGAAGAACGAAAGATAGAAAATGGGCTGATGAAGCTGAGAAAAATCGTCCCGGGTGGTTCAAATGGAGAA
TTGGAAGAAGATGATTTGTTCAAACAAACTGAGAGTCAATGTTCTTAG

mRNA sequence

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Protein sequence

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MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLRKIVPGGSNGE
LEEDDLFKQTESQCS

Carg24212 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome