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Carg24215 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24215
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhomogentisate phytyltransferase 1, chloroplastic-like
Genome locationCarg_Chr12:8249335..8251423
RNA-Seq ExpressionCarg24215
SyntenyCarg24215
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004659 - prenyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586087.1 Homogentisate phytyltransferase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.7e-2897.1Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

KAG7020912.1 Naringenin 8-dimethylallyltransferase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-38100Show/hide
Query:  MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKVCCRSLWAFTS
        MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKVCCRSLWAFTS
Subjt:  MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKVCCRSLWAFTS

XP_022938199.1 homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita moschata]7.7e-2897.1Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

XP_022969658.1 homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita maxima]3.2e-2694.2Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTV GHVILASILWI AKSVDLKSKAAITSFYMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

XP_023537912.1 homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita pepo subsp. pepo]3.2e-2694.2Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTV GHVILASILWI AKSVDLKSKAAITSFYMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

TrEMBL top hitse value%identityAlignment
A0A5A7UPN0 Homogentisate phytyltransferase 16.2e-2385.51Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GHV L SILWI AKSVDLKSKAAITSFYMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

A0A6J1FDD5 homogentisate phytyltransferase 1, chloroplastic-like3.7e-2897.1Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

A0A6J1I0J5 homogentisate phytyltransferase 1, chloroplastic-like1.6e-2694.2Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTV GHVILASILWI AKSVDLKSKAAITSFYMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

A0A6J1K7F2 homogentisate phytyltransferase 1, chloroplastic-like isoform X23.6e-2384.06Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GH+ LAS+LWI AKSVDLKSKAAITSFYMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

A0A6J1K9K8 homogentisate phytyltransferase 1, chloroplastic-like isoform X13.6e-2384.06Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GH+ LAS+LWI AKSVDLKSKAAITSFYMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

SwissProt top hitse value%identityAlignment
B1B3P3 Naringenin 8-dimethylallyltransferase 1, chloroplastic6.8e-1958.67Show/hide
Query:  MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +R+   +VFW C+SLLE+ YGV +LVG  S   WSK++TV GH +LAS+LW HAKSVDL S   + SFYMFIWK+
Subjt:  MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

B1B5P4 Naringenin 8-dimethylallyltransferase 2, chloroplastic4.0e-1960Show/hide
Query:  MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +R+   +VFW C+SLLE+AYGV +LVG  S   WSK++TV GH ILAS+LW HAKS DL S   + SFYMFIWK+
Subjt:  MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

B7FA90 Probable homogentisate phytyltransferase 1, chloroplastic1.7e-1758.67Show/hide
Query:  MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +R+   +VFW C+ LLE+AY VA+L+G  S+  WSK  TV GH ILA+ILW  ++S+DL SK AITSFYMFIWK+
Subjt:  MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

B9A1Q4 Glycinol 4-dimethylallyltransferase1.3e-1450.67Show/hide
Query:  MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +R+   + FW C+S  E+A+GV +L G + S  W+K+ T  G+ +LASILW  AKSVDL  KA+  SFYMFIWK+
Subjt:  MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

Q8VWJ1 Homogentisate phytyltransferase 1, chloroplastic9.8e-1862.32Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFW C++LL++AY VA+LVG  S   WSK+++V GHVILA+ LW  AKSVDL SK  ITS YMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV

Arabidopsis top hitse value%identityAlignment
AT2G18950.1 homogentisate phytyltransferase 17.0e-1962.32Show/hide
Query:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV
        +VFW C++LL++AY VA+LVG  S   WSK+++V GHVILA+ LW  AKSVDL SK  ITS YMFIWK+
Subjt:  QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATTACAATTCTGCAGGTGTTCTGGGGTTGTATTTCATTGCTTGAAGTAGCATATGGTGTTGCCGTTTTGGTGGGAGTTGCATCTTCCTCCCCGTGGAGCAAGTT
GCTAACGGTTTCGGGACACGTCATTTTGGCTTCAATTCTGTGGATTCATGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTCTACATGTTTATATGGA
AGGTATGCTGTAGGAGTTTATGGGCCTTCACCAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGATTACAATTCTGCAGGTGTTCTGGGGTTGTATTTCATTGCTTGAAGTAGCATATGGTGTTGCCGTTTTGGTGGGAGTTGCATCTTCCTCCCCGTGGAGCAAGTT
GCTAACGGTTTCGGGACACGTCATTTTGGCTTCAATTCTGTGGATTCATGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTCTACATGTTTATATGGA
AGGTATGCTGTAGGAGTTTATGGGCCTTCACCAGTTGA
Protein sequenceShow/hide protein sequence
MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKVCCRSLWAFTS