; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24225 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24225
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiondouble-stranded RNA-binding protein 4-like isoform X1
Genome locationCarg_Chr14:4481514..4484002
RNA-Seq ExpressionCarg24225
SyntenyCarg24225
Gene Ontology termsGO:0016075 - rRNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR011907 - Ribonuclease III
IPR014720 - Double-stranded RNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581214.1 Double-stranded RNA-binding protein 4, partial [Cucurbita argyrosperma subsp. sororia]3.0e-11698.67Show/hide
Query:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
        +DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
Subjt:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK

Query:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
        DSHPSQIQPKYMP+NTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPT SHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
Subjt:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR

Query:  KARKKLCMENQVATGTSQTAPCSIAQ
        KARKKLCMENQVATGTSQTAPCSIAQ
Subjt:  KARKKLCMENQVATGTSQTAPCSIAQ

KAG7017948.1 Double-stranded RNA-binding protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-154100Show/hide
Query:  MYERDKRKRIIKGAPIANVLSDRSPIETFEPSHGLHPFPRTFLFKTPLFLSSQIFHKFTKDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLV
        MYERDKRKRIIKGAPIANVLSDRSPIETFEPSHGLHPFPRTFLFKTPLFLSSQIFHKFTKDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLV
Subjt:  MYERDKRKRIIKGAPIANVLSDRSPIETFEPSHGLHPFPRTFLFKTPLFLSSQIFHKFTKDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLV

Query:  FDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVAC
        FDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVAC
Subjt:  FDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVAC

Query:  GAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKRKARKKLCMENQVATGTSQTAPCSIAQ
        GAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKRKARKKLCMENQVATGTSQTAPCSIAQ
Subjt:  GAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKRKARKKLCMENQVATGTSQTAPCSIAQ

XP_022935532.1 double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita moschata]5.1e-11698.67Show/hide
Query:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
        +DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
Subjt:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK

Query:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
        DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPT SHLGPEFRSIKP ASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
Subjt:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR

Query:  KARKKLCMENQVATGTSQTAPCSIAQ
        KARKKLCMENQVATGTSQTAPCSIAQ
Subjt:  KARKKLCMENQVATGTSQTAPCSIAQ

XP_022935533.1 double-stranded RNA-binding protein 4-like isoform X2 [Cucurbita moschata]5.6e-10794.25Show/hide
Query:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
        +DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
Subjt:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK

Query:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
        DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVA           SHLGPEFRSIKP ASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
Subjt:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR

Query:  KARKKLCMENQVATGTSQTAPCSIAQ
        KARKKLCMENQVATGTSQTAPCSIAQ
Subjt:  KARKKLCMENQVATGTSQTAPCSIAQ

XP_022984141.1 double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita maxima]6.0e-10997.67Show/hide
Query:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
        +DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
Subjt:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK

Query:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
        DSHPSQIQPKYMP+NTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPT SHLGPE RSIKPVASSPSERLPIESVPSTSEEPVGDRATG+KKRSKNKR
Subjt:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR

Query:  KARKKLCMENQVATG
        KARKKLCMENQVATG
Subjt:  KARKKLCMENQVATG

TrEMBL top hitse value%identityAlignment
A0A6J1F5U3 double-stranded RNA-binding protein 4-like isoform X12.5e-11698.67Show/hide
Query:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
        +DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
Subjt:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK

Query:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
        DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPT SHLGPEFRSIKP ASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
Subjt:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR

Query:  KARKKLCMENQVATGTSQTAPCSIAQ
        KARKKLCMENQVATGTSQTAPCSIAQ
Subjt:  KARKKLCMENQVATGTSQTAPCSIAQ

A0A6J1FAT0 double-stranded RNA-binding protein 4-like isoform X22.7e-10794.25Show/hide
Query:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
        +DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
Subjt:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK

Query:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
        DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVA           SHLGPEFRSIKP ASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
Subjt:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR

Query:  KARKKLCMENQVATGTSQTAPCSIAQ
        KARKKLCMENQVATGTSQTAPCSIAQ
Subjt:  KARKKLCMENQVATGTSQTAPCSIAQ

A0A6J1J1D4 double-stranded RNA-binding protein 4-like isoform X22.5e-10093.02Show/hide
Query:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
        +DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
Subjt:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK

Query:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
        DSHPSQIQPKYMP+NTVEHVTTTVNEDKEVNGAILDNVVA           SHLGPE RSIKPVASSPSERLPIESVPSTSEEPVGDRATG+KKRSKNKR
Subjt:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR

Query:  KARKKLCMENQVATG
        KARKKLCMENQVATG
Subjt:  KARKKLCMENQVATG

A0A6J1J4E3 double-stranded RNA-binding protein 4-like isoform X12.9e-10997.67Show/hide
Query:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
        +DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
Subjt:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK

Query:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
        DSHPSQIQPKYMP+NTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPT SHLGPE RSIKPVASSPSERLPIESVPSTSEEPVGDRATG+KKRSKNKR
Subjt:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR

Query:  KARKKLCMENQVATG
        KARKKLCMENQVATG
Subjt:  KARKKLCMENQVATG

A0A6J1J9P9 double-stranded RNA-binding protein 4-like isoform X34.7e-10797.63Show/hide
Query:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
        +DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK
Subjt:  KDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVK

Query:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR
        DSHPSQIQPKYMP+NTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPT SHLGPE RSIKPVASSPSERLPIESVPSTSEEPVGDRATG+KKRSKNKR
Subjt:  DSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKR

Query:  KARKKLCMENQ
        KARKKLCMENQ
Subjt:  KARKKLCMENQ

SwissProt top hitse value%identityAlignment
O04492 Double-stranded RNA-binding protein 11.9e-0427.7Show/hide
Query:  LCKSILSEYTVKMSLKRPMYTTKQHE--GSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLH-DAGN------------PKSQKTLAEII---
        LCK++L EY  KM+   P+Y  ++ E  G V  F  T+   G+ YTG  +R+KK+AE  A R A+L++  D  N            P  +KT+   I   
Subjt:  LCKSILSEYTVKMSLKRPMYTTKQHE--GSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLH-DAGN------------PKSQKTLAEII---

Query:  -------ASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEH--------VTTTVNEDKE--VNGAILDNVVACGAI-SEICPTTSHLGPE--FRSIKPVAS
               A K +     QK K +     +   +P    +H        + TT N +    +NG       A G++ +E   TT +L P      +K  A 
Subjt:  -------ASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEH--------VTTTVNEDKE--VNGAILDNVVACGAI-SEICPTTSHLGPE--FRSIKPVAS

Query:  SPSERLPIESVPS
           E   IE+ P+
Subjt:  SPSERLPIESVPS

Q0DJA3 Double-stranded RNA-binding protein 34.9e-0531.78Show/hide
Query:  LCKSILSEYTVKMSLKRPMY-TTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVKDSH
        LCK++L EY  KM+   P Y  TK   G  P F  T+   G+ Y G  +R+KK+AE  AAR A+L++       +      I+    R+   ++K     
Subjt:  LCKSILSEYTVKMSLKRPMY-TTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVKDSH

Query:  PSQIQPK
        P  ++ K
Subjt:  PSQIQPK

Q0IQN6 Double-stranded RNA-binding protein 86.5e-0531.78Show/hide
Query:  LCKSILSEYTVKMSLKRPMY-TTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVKDSH
        LCK++L EY  KM+   P Y  TK   G  P F  T+   G+ Y G  +R+KK+AE  AAR A+L++       +      I+    R+   ++K     
Subjt:  LCKSILSEYTVKMSLKRPMY-TTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVKDSH

Query:  PSQIQPK
        P  ++ K
Subjt:  PSQIQPK

Q0IV63 Double-stranded RNA-binding protein 72.9e-0531.78Show/hide
Query:  LCKSILSEYTVKMSLKRPMY-TTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVKDSH
        LCK++L EY  KM+   P Y  TK   G  P F  T+   G+ Y G  +R+KK+AE  AAR A+L++       +      I+    R+   ++K+    
Subjt:  LCKSILSEYTVKMSLKRPMY-TTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVKDSH

Query:  PSQIQPK
        P  ++ K
Subjt:  PSQIQPK

Q6YW64 Double-stranded RNA-binding protein 45.1e-1030.11Show/hide
Query:  SQIFHKFTKDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRL
        + +F    +D++  KSIL EYT K    +P Y+  + EGSV  + S++ F G  YTG  +R+KK+AEQ AARAA+ SL       +  ++A+I+ SK +L
Subjt:  SQIFHKFTKDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRL

Query:  HAMM-----QKVKDSHPSQIQPKYMPDNTVEHVTTTVNE--DKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSER
           +      K  DS+P+    K +P   ++    ++ +  D E++   +   +         P  +   P+ R     AS+PSE+
Subjt:  HAMM-----QKVKDSHPSQIQPKYMPDNTVEHVTTTVNE--DKEVNGAILDNVVACGAISEICPTTSHLGPEFRSIKPVASSPSER

Arabidopsis top hitse value%identityAlignment
AT1G09700.1 dsRNA-binding domain-like superfamily protein1.3e-0527.7Show/hide
Query:  LCKSILSEYTVKMSLKRPMYTTKQHE--GSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLH-DAGN------------PKSQKTLAEII---
        LCK++L EY  KM+   P+Y  ++ E  G V  F  T+   G+ YTG  +R+KK+AE  A R A+L++  D  N            P  +KT+   I   
Subjt:  LCKSILSEYTVKMSLKRPMYTTKQHE--GSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLH-DAGN------------PKSQKTLAEII---

Query:  -------ASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEH--------VTTTVNEDKE--VNGAILDNVVACGAI-SEICPTTSHLGPE--FRSIKPVAS
               A K +     QK K +     +   +P    +H        + TT N +    +NG       A G++ +E   TT +L P      +K  A 
Subjt:  -------ASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEH--------VTTTVNEDKE--VNGAILDNVVACGAI-SEICPTTSHLGPE--FRSIKPVAS

Query:  SPSERLPIESVPS
           E   IE+ P+
Subjt:  SPSERLPIESVPS

AT2G28380.1 dsRNA-binding protein 26.6e-0538.46Show/hide
Query:  KSILSEYTVKMSLKRPMYTT-KQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSL
        K++L E   ++    P YTT +   G  P+F  T+   G+ +TGD +++KK+AE+ AA AA  SL
Subjt:  KSILSEYTVKMSLKRPMYTT-KQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSL

AT3G26932.1 dsRNA-binding protein 31.1e-0428.8Show/hide
Query:  KSILSEYTVKMSLKRPMYTT-KQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHD-------AGNPKSQKTLAEIIASKVRLHAMMQK
        K++L E   +  L  P+YT+ +   G +P F  T+   G+ + G+ +++KK+AE+ AA AA  SL          G  K Q+ +A ++ S+ R     ++
Subjt:  KSILSEYTVKMSLKRPMYTT-KQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHD-------AGNPKSQKTLAEIIASKVRLHAMMQK

Query:  VKDSHPSQIQPKYMPDNTVEHVTTT
        VK   P+Q + + +     ++ TTT
Subjt:  VKDSHPSQIQPKYMPDNTVEHVTTT

AT3G26932.2 dsRNA-binding protein 31.1e-0428.8Show/hide
Query:  KSILSEYTVKMSLKRPMYTT-KQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHD-------AGNPKSQKTLAEIIASKVRLHAMMQK
        K++L E   +  L  P+YT+ +   G +P F  T+   G+ + G+ +++KK+AE+ AA AA  SL          G  K Q+ +A ++ S+ R     ++
Subjt:  KSILSEYTVKMSLKRPMYTT-KQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHD-------AGNPKSQKTLAEIIASKVRLHAMMQK

Query:  VKDSHPSQIQPKYMPDNTVEHVTTT
        VK   P+Q + + +     ++ TTT
Subjt:  VKDSHPSQIQPKYMPDNTVEHVTTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGAGAGAGATAAGCGCAAAAGAATTATAAAAGGGGCTCCAATTGCTAACGTCCTTAGTGATAGAAGTCCAATTGAGACGTTTGAACCTAGCCATGGCTTACACCC
ATTTCCAAGGACATTCCTTTTCAAGACTCCCCTATTTCTCTCGAGCCAAATCTTCCATAAATTCACAAAAGATTTGATGCTATGCAAGTCCATTTTGTCTGAATATACGG
TGAAAATGAGTTTGAAAAGACCTATGTACACTACTAAACAACATGAAGGCTCGGTTCCAATTTTCCAATCCACCTTGGTTTTCGATGGTGTGGTTTATACTGGTGATATT
AGTAGGAGTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCTGCTATTCTTTCTCTTCATGATGCAGGAAATCCTAAATCACAAAAAACTCTTGCCGAAATCATTGCATC
TAAAGTCCGGCTCCATGCAATGATGCAAAAAGTTAAAGATTCACATCCTTCTCAAATTCAACCGAAATATATGCCTGACAATACAGTGGAACATGTAACAACGACAGTTA
ATGAAGATAAAGAAGTCAATGGTGCTATTTTGGACAATGTAGTGGCATGTGGTGCAATTTCAGAGATTTGTCCAACAACATCTCATCTTGGACCTGAATTTAGATCAATA
AAACCGGTGGCATCATCCCCTTCAGAGAGACTTCCAATAGAATCTGTGCCTTCAACTTCAGAGGAGCCTGTTGGTGATCGTGCAACTGGGTCTAAAAAGCGATCTAAGAA
CAAGAGAAAGGCTCGTAAGAAACTGTGTATGGAGAACCAGGTGGCAACGGGGACGAGTCAAACTGCTCCTTGCTCCATAGCTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGAGAGAGATAAGCGCAAAAGAATTATAAAAGGGGCTCCAATTGCTAACGTCCTTAGTGATAGAAGTCCAATTGAGACGTTTGAACCTAGCCATGGCTTACACCC
ATTTCCAAGGACATTCCTTTTCAAGACTCCCCTATTTCTCTCGAGCCAAATCTTCCATAAATTCACAAAAGATTTGATGCTATGCAAGTCCATTTTGTCTGAATATACGG
TGAAAATGAGTTTGAAAAGACCTATGTACACTACTAAACAACATGAAGGCTCGGTTCCAATTTTCCAATCCACCTTGGTTTTCGATGGTGTGGTTTATACTGGTGATATT
AGTAGGAGTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCTGCTATTCTTTCTCTTCATGATGCAGGAAATCCTAAATCACAAAAAACTCTTGCCGAAATCATTGCATC
TAAAGTCCGGCTCCATGCAATGATGCAAAAAGTTAAAGATTCACATCCTTCTCAAATTCAACCGAAATATATGCCTGACAATACAGTGGAACATGTAACAACGACAGTTA
ATGAAGATAAAGAAGTCAATGGTGCTATTTTGGACAATGTAGTGGCATGTGGTGCAATTTCAGAGATTTGTCCAACAACATCTCATCTTGGACCTGAATTTAGATCAATA
AAACCGGTGGCATCATCCCCTTCAGAGAGACTTCCAATAGAATCTGTGCCTTCAACTTCAGAGGAGCCTGTTGGTGATCGTGCAACTGGGTCTAAAAAGCGATCTAAGAA
CAAGAGAAAGGCTCGTAAGAAACTGTGTATGGAGAACCAGGTGGCAACGGGGACGAGTCAAACTGCTCCTTGCTCCATAGCTCAATGACTGTAAAGTATCCTGTATTATA
AGTGCTCATCTGCTTCAAAGGTAACATTTAAGAGTAGTTTTGAGTATGAATACCATGAATTCGAGATTCCGCTTCTGTTGTAGGTCTATGTTTGACATCGACCACGCGAG
TACACGATCAATCAGTTCATATGTTATTATAAAATATAGTGGTAGCTTTGTAGGCTGTCCTTAGGAGCCAAAAAAAAAAACATCACAGATTGGTTTGGATACTCATAGGA
TTAAGGTTAAGCTTCCTGGCTCAGTTTAATTGTTTATATGATGCATTGAAGTAATATTTGTTAATGCAGGGGTTTGAGATAATATTACGTACGGCCTGTTATGACCTTAT
ATACTAGTTTTAAAGTTTAGAGACTAAATTTATAATTTTTGTTTCCATGTAAGTTAGATGTTTTAAATTTTAAACTATAAGCCATGTTCATATTAGATATTATGAGTATT
TAAGCTTCATATGTGTGTAAAGTTATAGGTTTGTTCCTTTTCTTAAACATGTGTCACCTTTTTTTTTTTCTTTAAATAAATACTATGGAATGAGAAATAGTATATATGAA
TATCAAAGATAATTAATATCACGAAGTTTATGTGTTTCGATATAAAAGAAAATTAATGTTCAAGAATTAACTGTTTATGCTGTGAATTAGAGTGATATATA
Protein sequenceShow/hide protein sequence
MYERDKRKRIIKGAPIANVLSDRSPIETFEPSHGLHPFPRTFLFKTPLFLSSQIFHKFTKDLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDI
SRSKKEAEQLAARAAILSLHDAGNPKSQKTLAEIIASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGAISEICPTTSHLGPEFRSI
KPVASSPSERLPIESVPSTSEEPVGDRATGSKKRSKNKRKARKKLCMENQVATGTSQTAPCSIAQ