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Carg24238 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24238
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNicastrin
Genome locationCarg_Chr14:4592387..4598698
RNA-Seq ExpressionCarg24238
SyntenyCarg24238
Gene Ontology termsGO:0016485 - protein processing (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017961.1 Nicastrin, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-113100Show/hide
Query:  MRDLFTFTFTLRRVEIPKNAATDCDLRERTAKSASMSSHILYLLLFVNSLRLSSSELADIWVVLEDFDTELADILMIFVNNLNSSSIEAAALLYSSFILD
        MRDLFTFTFTLRRVEIPKNAATDCDLRERTAKSASMSSHILYLLLFVNSLRLSSSELADIWVVLEDFDTELADILMIFVNNLNSSSIEAAALLYSSFILD
Subjt:  MRDLFTFTFTLRRVEIPKNAATDCDLRERTAKSASMSSHILYLLLFVNSLRLSSSELADIWVVLEDFDTELADILMIFVNNLNSSSIEAAALLYSSFILD

Query:  EPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPGYDFRNYSTRLEVPSSVPRHEEPCRFYDPDERHI
        EPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPGYDFRNYSTRLEVPSSVPRHEEPCRFYDPDERHI
Subjt:  EPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPGYDFRNYSTRLEVPSSVPRHEEPCRFYDPDERHI

Query:  WNHYQGSR
        WNHYQGSR
Subjt:  WNHYQGSR
XP_022934237.1 nicastrin-like isoform X1 [Cucurbita moschata]9.4e-3589.77Show/hide
Query:  NNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPG
        +NLNSSSIEAAALLYS FILDE     YSGYVHDDSRFVWN+LADRTSIPKENTSSVCSQNCDDKSEVCI VETGKGTCIISTTSLPG
Subjt:  NNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPG
XP_022934238.1 nicastrin-like isoform X2 [Cucurbita moschata]9.4e-3589.77Show/hide
Query:  NNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPG
        +NLNSSSIEAAALLYS FILDE     YSGYVHDDSRFVWN+LADRTSIPKENTSSVCSQNCDDKSEVCI VETGKGTCIISTTSLPG
Subjt:  NNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPG
XP_022997757.1 nicastrin [Cucurbita maxima]1.8e-2550Show/hide
Query:  VNSLRLSSSELADIWVVLEDFDTELA-DILMIFVNNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKS
        +N+++L++S + +I   L + D  L+ +++  ++     S I      Y   ILDEPS  PY GYVHD SRFVWN+LADRTSIPKENTSSVCSQNCDDKS
Subjt:  VNSLRLSSSELADIWVVLEDFDTELA-DILMIFVNNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKS

Query:  EVCITVETGKGTCIISTTS-LPGYDFRNYSTRLEVPSS-----VPRHEEPCRFYDP
        EVCI  ETGKGTC++STT  +P      YSTRL   S       P   +P    DP
Subjt:  EVCITVETGKGTCIISTTS-LPGYDFRNYSTRLEVPSS-----VPRHEEPCRFYDP
XP_038896057.1 nicastrin [Benincasa hispida]1.6e-2664.81Show/hide
Query:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTS-LPGYDFRNYSTRLEVPSSV-----PRHE
        Y   ILDEPS  PY GYVHD SRFVWN+LADRTSIPKENTSSVCSQNCDDKSEVCI  ETGKGTC+ISTT  +P      YSTRL+  S       P   
Subjt:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTS-LPGYDFRNYSTRLEVPSSV-----PRHE

Query:  EPCRFYDP
        +P    DP
Subjt:  EPCRFYDP
TrEMBL top hitse value%identityAlignment
A0A1S3C4C7 Nicastrin1.1e-2573.03Show/hide
Query:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTS-LPGYDFRNYSTRLEVPS
        Y   ILDEPS APY  YVHD SRFVWN+LADRTSIPKENTSSVCSQNCDD+SEVCI  ETGKGTC+ISTT  +P      YSTRL+  S
Subjt:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTS-LPGYDFRNYSTRLEVPS
A0A5D3CQA8 Nicastrin isoform X11.1e-2573.03Show/hide
Query:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTS-LPGYDFRNYSTRLEVPS
        Y   ILDEPS APY  YVHD SRFVWN+LADRTSIPKENTSSVCSQNCDD+SEVCI  ETGKGTC+ISTT  +P      YSTRL+  S
Subjt:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTS-LPGYDFRNYSTRLEVPS
A0A6J1F251 nicastrin-like isoform X14.5e-3589.77Show/hide
Query:  NNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPG
        +NLNSSSIEAAALLYS FILDE     YSGYVHDDSRFVWN+LADRTSIPKENTSSVCSQNCDDKSEVCI VETGKGTCIISTTSLPG
Subjt:  NNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPG
A0A6J1F740 nicastrin-like isoform X24.5e-3589.77Show/hide
Query:  NNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPG
        +NLNSSSIEAAALLYS FILDE     YSGYVHDDSRFVWN+LADRTSIPKENTSSVCSQNCDDKSEVCI VETGKGTCIISTTSLPG
Subjt:  NNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPG
A0A6J1K5Z2 Nicastrin8.6e-2650Show/hide
Query:  VNSLRLSSSELADIWVVLEDFDTELA-DILMIFVNNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKS
        +N+++L++S + +I   L + D  L+ +++  ++     S I      Y   ILDEPS  PY GYVHD SRFVWN+LADRTSIPKENTSSVCSQNCDDKS
Subjt:  VNSLRLSSSELADIWVVLEDFDTELA-DILMIFVNNLNSSSIEAAALLYSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKS

Query:  EVCITVETGKGTCIISTTS-LPGYDFRNYSTRLEVPSS-----VPRHEEPCRFYDP
        EVCI  ETGKGTC++STT  +P      YSTRL   S       P   +P    DP
Subjt:  EVCITVETGKGTCIISTTS-LPGYDFRNYSTRLEVPSS-----VPRHEEPCRFYDP
SwissProt top hitse value%identityAlignment
Q8GUM5 Nicastrin4.5e-1655.56Show/hide
Query:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQN-CDDKSEVCITVETGK-GTCIISTTS-LPGYDFR
        Y+  IL EPS  PY GYV D SRF+WN+LAD+TS+ K NT+SVCS+  C    EVCI  E+ K GTC++STT  +P Y  R
Subjt:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQN-CDDKSEVCITVETGK-GTCIISTTS-LPGYDFR
Arabidopsis top hitse value%identityAlignment
AT3G52640.1 Zn-dependent exopeptidases superfamily protein3.2e-1755.56Show/hide
Query:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQN-CDDKSEVCITVETGK-GTCIISTTS-LPGYDFR
        Y+  IL EPS  PY GYV D SRF+WN+LAD+TS+ K NT+SVCS+  C    EVCI  E+ K GTC++STT  +P Y  R
Subjt:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQN-CDDKSEVCITVETGK-GTCIISTTS-LPGYDFR
AT3G52640.2 Zn-dependent exopeptidases superfamily protein3.2e-1755.56Show/hide
Query:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQN-CDDKSEVCITVETGK-GTCIISTTS-LPGYDFR
        Y+  IL EPS  PY GYV D SRF+WN+LAD+TS+ K NT+SVCS+  C    EVCI  E+ K GTC++STT  +P Y  R
Subjt:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQN-CDDKSEVCITVETGK-GTCIISTTS-LPGYDFR
AT3G52640.3 Zn-dependent exopeptidases superfamily protein1.6e-1658.33Show/hide
Query:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQN-CDDKSEVCITVETGK-GTCIISTT
        Y+  IL EPS  PY GYV D SRF+WN+LAD+TS+ K NT+SVCS+  C    EVCI  E+ K GTC++STT
Subjt:  YSSFILDEPSFAPYSGYVHDDSRFVWNYLADRTSIPKENTSSVCSQN-CDDKSEVCITVETGK-GTCIISTT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGACCTATTCACCTTCACCTTCACTCTGCGCAGAGTTGAAATCCCCAAGAACGCTGCGACGGACTGCGATTTGAGAGAAAGAACAGCCAAATCCGCATCCATGTC
TTCCCACATTCTTTACCTCCTTCTGTTCGTTAATTCTCTTCGCCTCTCTTCATCAGAACTCGCAGATATCTGGGTGGTATTAGAAGACTTCGATACAGAACTCGCAGATA
TCTTGATGATTTTCGTAAATAATTTAAACTCGTCCTCTATTGAAGCAGCTGCTTTGCTTTACTCATCGTTTATCCTTGATGAACCTTCCTTTGCTCCTTATTCTGGTTAT
GTTCATGACGATTCAAGATTTGTTTGGAATTATTTGGCTGACAGAACATCTATTCCTAAAGAGAATACTAGCTCAGTCTGTTCACAGAATTGTGATGACAAAAGTGAGGT
GTGCATTACAGTGGAGACTGGAAAGGGAACTTGTATTATATCTACTACCAGCCTACCAGGTTACGATTTCCGCAATTACTCAACAAGATTGGAAGTTCCCTCATCAGTAC
CTCGCCACGAGGAGCCTTGTCGATTCTACGATCCGGACGAGAGACATATCTGGAATCACTATCAAGGCTCTCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGACCTATTCACCTTCACCTTCACTCTGCGCAGAGTTGAAATCCCCAAGAACGCTGCGACGGACTGCGATTTGAGAGAAAGAACAGCCAAATCCGCATCCATGTC
TTCCCACATTCTTTACCTCCTTCTGTTCGTTAATTCTCTTCGCCTCTCTTCATCAGAACTCGCAGATATCTGGGTGGTATTAGAAGACTTCGATACAGAACTCGCAGATA
TCTTGATGATTTTCGTAAATAATTTAAACTCGTCCTCTATTGAAGCAGCTGCTTTGCTTTACTCATCGTTTATCCTTGATGAACCTTCCTTTGCTCCTTATTCTGGTTAT
GTTCATGACGATTCAAGATTTGTTTGGAATTATTTGGCTGACAGAACATCTATTCCTAAAGAGAATACTAGCTCAGTCTGTTCACAGAATTGTGATGACAAAAGTGAGGT
GTGCATTACAGTGGAGACTGGAAAGGGAACTTGTATTATATCTACTACCAGCCTACCAGGTTACGATTTCCGCAATTACTCAACAAGATTGGAAGTTCCCTCATCAGTAC
CTCGCCACGAGGAGCCTTGTCGATTCTACGATCCGGACGAGAGACATATCTGGAATCACTATCAAGGCTCTCGGTAA
Protein sequenceShow/hide protein sequence
MRDLFTFTFTLRRVEIPKNAATDCDLRERTAKSASMSSHILYLLLFVNSLRLSSSELADIWVVLEDFDTELADILMIFVNNLNSSSIEAAALLYSSFILDEPSFAPYSGY
VHDDSRFVWNYLADRTSIPKENTSSVCSQNCDDKSEVCITVETGKGTCIISTTSLPGYDFRNYSTRLEVPSSVPRHEEPCRFYDPDERHIWNHYQGSR