CuGenDBv2

Gene ID	Carg24240
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Coiled-coil domain-containing protein 16
Genome location	Carg_Chr14:4605442..4606978
RNA-Seq Expression	Carg24240
Synteny	Carg24240
Gene Ontology terms	GO:0033260 - nuclear DNA replication (biological process) GO:0033314 - mitotic DNA replication checkpoint (biological process) GO:0044773 - mitotic DNA damage checkpoint (biological process) GO:0048478 - replication fork protection (biological process) GO:0005681 - spliceosomal complex (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR040050 - Zinc finger protein 830-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581231.1 hypothetical protein SDJN03_21233, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-80

100

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Query:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
        GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
Subjt:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM

Query:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
        IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
Subjt:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

KAG7017963.1 hypothetical protein SDJN02_19829, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.8e-92

100

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Query:  MWSSIVSLFNMSNLICALPGKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQE
        MWSSIVSLFNMSNLICALPGKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQE
Subjt:  MWSSIVSLFNMSNLICALPGKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQE

Query:  DLQEVDNRLEEEEIDAAEMIEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
        DLQEVDNRLEEEEIDAAEMIEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
Subjt:  DLQEVDNRLEEEEIDAAEMIEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

XP_022934879.1 zinc finger protein 830-like [Cucurbita moschata]

9.6e-79

99.41

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Query:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
        GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
Subjt:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM

Query:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
        IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDD SSDDDSDTNYTVDWRAQHL
Subjt:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

XP_022983328.1 zinc finger protein 830-like [Cucurbita maxima]

8.1e-78

96.47

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Query:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
        GKDAEPDLRSGSIAQSE I KASDLGKKSS+NVGSEGKQIKG+LPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
Subjt:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM

Query:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
        IEEAETLEQKAYRERVERLKRKKMELKTKK+VEQSRAEPEIPTKESSLDDS SDDDSDTNYTVDWRAQHL
Subjt:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

XP_023529023.1 zinc finger protein 830-like [Cucurbita pepo subsp. pepo]

1.9e-79

98.82

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Query:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
        GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGK+IKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
Subjt:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM

Query:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
        IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDS SDDDSDTNYTVDWRAQHL
Subjt:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C619 Coiled-coil domain-containing protein 16

3.0e-70

90.06

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Query:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
        GKD   D RSGSIAQSEVI KASD  KKSS+N GSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVD+RLEEEEIDAAEM
Subjt:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM

Query:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSS-DDDSDTNYTVDWRAQHL
        IEEAETLEQKAYRERVE LKRKKMELKTKKS EQSRAEP+IPTK+S  DDSSS DDDSDTNYTVDWRAQHL
Subjt:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSS-DDDSDTNYTVDWRAQHL

A0A1S3C6M3 zinc finger protein 830 isoform X2

3.0e-70

90.06

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Query:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
        GKD   D RSGSIAQSEVI KASD  KKSS+N GSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVD+RLEEEEIDAAEM
Subjt:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM

Query:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSS-DDDSDTNYTVDWRAQHL
        IEEAETLEQKAYRERVE LKRKKMELKTKKS EQSRAEP+IPTK+S  DDSSS DDDSDTNYTVDWRAQHL
Subjt:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSS-DDDSDTNYTVDWRAQHL

A0A5A7TSM1 Coiled-coil domain-containing protein 16

3.0e-70

90.06

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Query:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
        GKD   D RSGSIAQSEVI KASD  KKSS+N GSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVD+RLEEEEIDAAEM
Subjt:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM

Query:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSS-DDDSDTNYTVDWRAQHL
        IEEAETLEQKAYRERVE LKRKKMELKTKKS EQSRAEP+IPTK+S  DDSSS DDDSDTNYTVDWRAQHL
Subjt:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSS-DDDSDTNYTVDWRAQHL

A0A6J1F3U0 Coiled-coil domain-containing protein 16

4.7e-79

99.41

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Query:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
        GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
Subjt:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM

Query:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
        IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDD SSDDDSDTNYTVDWRAQHL
Subjt:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

A0A6J1J7G2 Coiled-coil domain-containing protein 16

3.9e-78

96.47

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Query:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
        GKDAEPDLRSGSIAQSE I KASDLGKKSS+NVGSEGKQIKG+LPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM
Subjt:  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM

Query:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
        IEEAETLEQKAYRERVERLKRKKMELKTKK+VEQSRAEPEIPTKESSLDDS SDDDSDTNYTVDWRAQHL
Subjt:  IEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

SwissProt top hits

e value

%identity

Alignment

Q9M8S7 Protein ABA AND ROS SENSITIVE 1

1.7e-33

56.67

Show/hide

Query:  SDLGKKSSVNVGSEGK-QIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAETLEQKAYRERVERLKR
        S+  +  +   G E K  + G LP GFFD+KEADL AHGIKLVKPD+KDEYKEFEKLIQ+DLQ VD+R+EEEE+DAAE IEE E  EQ++Y+E+VE LKR
Subjt:  SDLGKKSSVNVGSEGK-QIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAETLEQKAYRERVERLKR

Query:  KKMELKTKKSVEQSR-AEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
        KKMELK  +  ++S+ +E  +   + + ++S SD++ D +  VDWRAQHL
Subjt:  KKMELKTKKSVEQSR-AEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

Arabidopsis top hits

e value

%identity

Alignment

AT3G02860.1 zinc ion binding

1.2e-34

56.67

Show/hide

Query:  SDLGKKSSVNVGSEGK-QIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAETLEQKAYRERVERLKR
        S+  +  +   G E K  + G LP GFFD+KEADL AHGIKLVKPD+KDEYKEFEKLIQ+DLQ VD+R+EEEE+DAAE IEE E  EQ++Y+E+VE LKR
Subjt:  SDLGKKSSVNVGSEGK-QIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAETLEQKAYRERVERLKR

Query:  KKMELKTKKSVEQSR-AEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
        KKMELK  +  ++S+ +E  +   + + ++S SD++ D +  VDWRAQHL
Subjt:  KKMELKTKKSVEQSR-AEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

AT3G02860.2 zinc ion binding

1.2e-34

56.67

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Query:  SDLGKKSSVNVGSEGK-QIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAETLEQKAYRERVERLKR
        S+  +  +   G E K  + G LP GFFD+KEADL AHGIKLVKPD+KDEYKEFEKLIQ+DLQ VD+R+EEEE+DAAE IEE E  EQ++Y+E+VE LKR
Subjt:  SDLGKKSSVNVGSEGK-QIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAETLEQKAYRERVERLKR

Query:  KKMELKTKKSVEQSR-AEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL
        KKMELK  +  ++S+ +E  +   + + ++S SD++ D +  VDWRAQHL
Subjt:  KKMELKTKKSVEQSR-AEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTGGTCTAGCATTGTCTCACTTTTCAACATGTCTAATTTGATTTGTGCTCTTCCAGGAAAGGATGCTGAACCTGATTTACGCAGTGGTAGCATTGCACAGTCAGAGGT
GATTGCAAAGGCCAGTGACCTTGGTAAGAAATCTTCTGTGAATGTTGGTTCAGAGGGGAAGCAAATAAAGGGAGCTCTGCCCGAAGGTTTCTTTGATGACAAAGAGGCTG
ATTTGCGTGCACATGGCATAAAACTTGTTAAGCCTGATGTCAAAGATGAATACAAGGAATTTGAAAAGTTGATCCAAGAAGATTTGCAGGAGGTGGATAACCGTTTGGAA
GAGGAGGAGATTGATGCTGCCGAAATGATAGAGGAAGCTGAAACCTTAGAGCAGAAGGCCTACAGGGAGAGAGTAGAAAGGTTGAAGAGGAAGAAAATGGAGTTAAAGAC
CAAAAAATCAGTAGAACAAAGTAGAGCGGAGCCTGAAATTCCTACTAAAGAGTCTAGCCTTGACGATTCTTCGAGTGATGATGATAGTGACACAAATTATACAGTAGATT
GGAGAGCTCAACACTTGTGA

mRNA sequence

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Protein sequence

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MWSSIVSLFNMSNLICALPGKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLE
EEEIDAAEMIEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

Carg24240 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome