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Carg24246 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24246
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription repressor KAN1-like isoform X1
Genome locationCarg_Chr14:4656622..4657085
RNA-Seq ExpressionCarg24246
SyntenyCarg24246
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017969.1 hypothetical protein SDJN02_19835, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-43100Show/hide
Query:  MSYLAWAECVRSKRALLEWLEVIEPKRHPKSAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
        MSYLAWAECVRSKRALLEWLEVIEPKRHPKSAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
Subjt:  MSYLAWAECVRSKRALLEWLEVIEPKRHPKSAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
XP_022934718.1 transcription repressor KAN1-like isoform X1 [Cucurbita moschata]1.5e-2396.43Show/hide
Query:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
        S+ DVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
Subjt:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
XP_022934721.1 transcription repressor KAN1-like isoform X4 [Cucurbita moschata]1.5e-2396.43Show/hide
Query:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
        S+ DVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
Subjt:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
XP_022934722.1 transcription repressor KAN1-like isoform X5 [Cucurbita moschata]1.5e-2396.43Show/hide
Query:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
        S+ DVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
Subjt:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
XP_022934724.1 transcription repressor KAN1-like isoform X6 [Cucurbita moschata]1.5e-2396.43Show/hide
Query:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
        S+ DVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
Subjt:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
TrEMBL top hitse value%identityAlignment
A0A6J1F2L2 transcription repressor KAN1-like isoform X47.4e-2496.43Show/hide
Query:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
        S+ DVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
Subjt:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
A0A6J1F3E1 transcription repressor KAN1-like isoform X67.4e-2496.43Show/hide
Query:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
        S+ DVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
Subjt:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
A0A6J1F3L6 transcription repressor KAN1-like isoform X57.4e-2496.43Show/hide
Query:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
        S+ DVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
Subjt:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
A0A6J1F8G0 transcription repressor KAN1-like isoform X17.4e-2496.43Show/hide
Query:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
        S+ DVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
Subjt:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
A0A6J1F8J1 transcription repressor KAN1-like isoform X37.4e-2496.43Show/hide
Query:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
        S+ DVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
Subjt:  SAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTATCTAGCTTGGGCTGAGTGTGTAAGATCAAAACGTGCGCTTCTAGAATGGCTCGAGGTCATTGAGCCAAAAAGGCATCCTAAGAGCGCTGGAGATGTTTGGGC
AGAAACAAACGGCAATGAAATGGATGTGATTAGGCCAAGTTTGTATGCCAAAATGCAGCAGAAATGCATGCACCAAATTCAGGAATGTGATTCAGGTGCAATGAAGAAAT
ACAATTCAGAATGCTGCAACAAACCAAGCTTGGAGTTC
mRNA sequenceShow/hide mRNA sequence
ATGTCTTATCTAGCTTGGGCTGAGTGTGTAAGATCAAAACGTGCGCTTCTAGAATGGCTCGAGGTCATTGAGCCAAAAAGGCATCCTAAGAGCGCTGGAGATGTTTGGGC
AGAAACAAACGGCAATGAAATGGATGTGATTAGGCCAAGTTTGTATGCCAAAATGCAGCAGAAATGCATGCACCAAATTCAGGAATGTGATTCAGGTGCAATGAAGAAAT
ACAATTCAGAATGCTGCAACAAACCAAGCTTGGAGTTC
Protein sequenceShow/hide protein sequence
MSYLAWAECVRSKRALLEWLEVIEPKRHPKSAGDVWAETNGNEMDVIRPSLYAKMQQKCMHQIQECDSGAMKKYNSECCNKPSLEF