; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24282 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24282
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF 3339)
Genome locationCarg_Chr15:476448..479638
RNA-Seq ExpressionCarg24282
SyntenyCarg24282
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015947.1 hypothetical protein SDJN02_21051, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-80100Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG

Query:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
Subjt:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

XP_022939120.1 uncharacterized protein LOC111445120 [Cucurbita moschata]1.2e-7482.72Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH--------------------------------TNS
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH                                TNS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH--------------------------------TNS

Query:  LHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        LHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHI+TG
Subjt:  LHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

XP_022993368.1 uncharacterized protein LOC111489412 [Cucurbita maxima]2.3e-7380.93Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH-----------------------------------
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH                                   
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH-----------------------------------

Query:  TNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        TNSLHVLLL IFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHI+TG
Subjt:  TNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

XP_023551540.1 uncharacterized protein LOC111809330 [Cucurbita pepo subsp. pepo]2.6e-6969.96Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH-----------------------------------
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH                                   
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH-----------------------------------

Query:  -----------------------------TNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAI
                                     T SLHVLLL IFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAI
Subjt:  -----------------------------TNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAI

Query:  HTLIFFILYAVFILALRIHIFTG
        HTLIFFILYAVFILALRIHI+TG
Subjt:  HTLIFFILYAVFILALRIHIFTG

XP_038884726.1 uncharacterized protein LOC120075418 [Benincasa hispida]5.3e-6281.76Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLLAV VH              +  V Y+I E MSDWAPVVIG
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG

Query:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKA+AIHTLIFFILY+VFILAL +HI+TG
Subjt:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

TrEMBL top hitse value%identityAlignment
A0A1S3B371 uncharacterized protein LOC103485472 isoform X23.4e-5979.25Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG
        MADWGPVFVAV+LFVLLTPGLLVQMPGK+RF+EFGNFQTSGVSILVHS LYFALICIFLLAV  H  +L                   E MSDWAPVVIG
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG

Query:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKA+AIHTLIFF+LYAVFILAL IHI+TG
Subjt:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

A0A6J1BIX5 uncharacterized protein LOC1104279237.4e-5471.07Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG
        M+DWGPVFVAVVLF+LLTPGLL+Q+PGK+RFIEFGNFQTSG+SILVHS +YFALICIFLLAVGVH  S   L+                 M+DWAPV++G
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG

Query:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        VVLFVLLSPGLLF FPGN++Q EFGSMKTNGKAIAIHTL+FF +YAV ILA+ +HI+TG
Subjt:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

A0A6J1FLS0 uncharacterized protein LOC1114451205.8e-7582.72Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH--------------------------------TNS
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH                                TNS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH--------------------------------TNS

Query:  LHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        LHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHI+TG
Subjt:  LHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

A0A6J1K207 uncharacterized protein LOC1114894121.1e-7380.93Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH-----------------------------------
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH                                   
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH-----------------------------------

Query:  TNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        TNSLHVLLL IFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHI+TG
Subjt:  TNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

A0A6P4B5Q9 uncharacterized protein LOC1074279436.7e-5572.33Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG
        M+DWGPVFVAVVLF+LLTPGLL+Q+PGK+RF+EFGNFQTSGVSILVHS LYFALICIFLLA+GVH          IF             M+DWAPVVIG
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG

Query:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        VVLFVLL PGLLFQFPG+++Q EFGSMKTNGKAIA+HTLIFF LY +FILAL +HI+TG
Subjt:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27030.1 unknown protein2.4e-4959.12Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG
        M DWGPVFVAV LFVLLTPGLL+Q+PG+ R +EFG FQTSG+S++VH+ +YF L+CI LLA+ +H  +L                     M+DWAPV++G
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIG

Query:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        VVLFV+LSPGLLF  PGNNR  +FG +KTNGKAIA+HTLIFF +Y + ILAL +HI+TG
Subjt:  VVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

AT3G48660.1 Protein of unknown function (DUF 3339)1.7e-1856.63Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHT-NSLHVLLLRIFLSLRL
        MADWGPV VAV+LFVLLTPGLL Q+P + R +EFGN QTSG SILVH+ ++F LI IF +A+ +H       L L  F+ +R+
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHT-NSLHVLLLRIFLSLRL

AT5G08391.1 Protein of unknown function (DUF 3339)4.3e-2266.15Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH
        M+DWGPV V V+LFV+LTPGLL Q+PG+ +++EFGNFQTS VS++VHS LYF+L+C+FLLA+ +H
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVH

AT5G40970.1 Protein of unknown function (DUF 3339)9.7e-2266.67Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG
        M+DWAPV++GVVLFV+LSPGLLF  PG++   +FG MKTNGKAIA+HTLIFF  Y + ILA+ +HI TG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG

AT5G63500.1 Protein of unknown function (DUF 3339)1.0e-1861.76Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNS
        MADWGPV +AV+LFV+L+PGLL Q+P   R +EFGN QTSG SILVH+ ++F LI IF +A+ VH  S
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTGGGGTCCGGTCTTTGTGGCGGTGGTGCTCTTCGTTCTCCTAACCCCCGGATTGCTCGTTCAGATGCCTGGGAAGAATCGCTTCATCGAGTTTGGGAACTT
CCAGACCAGCGGAGTCTCCATTCTGGTTCATTCCGCTCTCTATTTTGCCTTGATCTGCATCTTCTTGCTGGCTGTTGGTGTTCATACCAACTCGCTTCACGTTTTGCTAC
TTCGGATATTTCTCTCTTTACGTCTAGTGAAGTACGAAATCTGGGAAAGGATGTCGGATTGGGCACCGGTAGTGATCGGAGTTGTACTGTTCGTACTGCTCTCTCCAGGG
CTTCTGTTCCAGTTTCCGGGGAATAATCGACAGTTTGAGTTTGGGAGTATGAAGACCAACGGCAAGGCCATCGCCATTCACACGCTCATCTTTTTCATCCTTTACGCCGT
CTTCATTCTCGCTCTCCGTATCCACATCTTTACTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTGGGGTCCGGTCTTTGTGGCGGTGGTGCTCTTCGTTCTCCTAACCCCCGGATTGCTCGTTCAGATGCCTGGGAAGAATCGCTTCATCGAGTTTGGGAACTT
CCAGACCAGCGGAGTCTCCATTCTGGTTCATTCCGCTCTCTATTTTGCCTTGATCTGCATCTTCTTGCTGGCTGTTGGTGTTCATACCAACTCGCTTCACGTTTTGCTAC
TTCGGATATTTCTCTCTTTACGTCTAGTGAAGTACGAAATCTGGGAAAGGATGTCGGATTGGGCACCGGTAGTGATCGGAGTTGTACTGTTCGTACTGCTCTCTCCAGGG
CTTCTGTTCCAGTTTCCGGGGAATAATCGACAGTTTGAGTTTGGGAGTATGAAGACCAACGGCAAGGCCATCGCCATTCACACGCTCATCTTTTTCATCCTTTACGCCGT
CTTCATTCTCGCTCTCCGTATCCACATCTTTACTGGCTGA
Protein sequenceShow/hide protein sequence
MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLLAVGVHTNSLHVLLLRIFLSLRLVKYEIWERMSDWAPVVIGVVLFVLLSPG
LLFQFPGNNRQFEFGSMKTNGKAIAIHTLIFFILYAVFILALRIHIFTG