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Carg24291 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24291
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:433838..438771
RNA-Seq ExpressionCarg24291
SyntenyCarg24291
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015934.1 hypothetical protein SDJN02_21038 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-7396.6Show/hide
Query:  MDGNGSINNELHGKVASAVCLWLLQLHRRYGEDMGYHGITDIAFSRLVDSRRSREIKFRPIPPAATSSLVGGTEFKSMVIKTKGAAGKLSCVESLNKRLG
        MDGNGSINNELHGKVASAVCLWLLQLHRRYGEDMGYHGITDIAFSRLVDSRRSREIKFRP+PPAATSSLVGGTEFKSMVIKTK AA KLSCVESLNKRLG
Subjt:  MDGNGSINNELHGKVASAVCLWLLQLHRRYGEDMGYHGITDIAFSRLVDSRRSREIKFRPIPPAATSSLVGGTEFKSMVIKTKGAAGKLSCVESLNKRLG

Query:  LRGLSERKELVTKNKIRMDQLRTSPPSCPPYPNFSALSFCGVLVQLR
        LRGLSERKELVTKNKIRMDQL+TSPPSCPPYPNFSALSF GVLVQLR
Subjt:  LRGLSERKELVTKNKIRMDQLRTSPPSCPPYPNFSALSFCGVLVQLR
KAG7015936.1 hypothetical protein SDJN02_21040 [Cucurbita argyrosperma subsp. argyrosperma]7.1e-112100Show/hide
Query:  MDGNGSINNELHGKVASAVCLWLLQLHRRYGEDMGYHGITDIAFSRLVDSRRSREIKFRPIPPAATSSLVGGTEFKSMVIKTKGAAGKLSCVESLNKRLG
        MDGNGSINNELHGKVASAVCLWLLQLHRRYGEDMGYHGITDIAFSRLVDSRRSREIKFRPIPPAATSSLVGGTEFKSMVIKTKGAAGKLSCVESLNKRLG
Subjt:  MDGNGSINNELHGKVASAVCLWLLQLHRRYGEDMGYHGITDIAFSRLVDSRRSREIKFRPIPPAATSSLVGGTEFKSMVIKTKGAAGKLSCVESLNKRLG

Query:  LRGLSERKELVTKNKIRMDQLRTSPPSCPPYPNFSALSFCGVLVQLREKTWVISLFFGFPRKIDRVCSSRDSLADLILWITTSTTMCDVEHAKMLLKASS
        LRGLSERKELVTKNKIRMDQLRTSPPSCPPYPNFSALSFCGVLVQLREKTWVISLFFGFPRKIDRVCSSRDSLADLILWITTSTTMCDVEHAKMLLKASS
Subjt:  LRGLSERKELVTKNKIRMDQLRTSPPSCPPYPNFSALSFCGVLVQLREKTWVISLFFGFPRKIDRVCSSRDSLADLILWITTSTTMCDVEHAKMLLKASS

Query:  VELEQ
        VELEQ
Subjt:  VELEQ
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGCAATGGTTCCATAAACAATGAACTACACGGAAAGGTTGCATCAGCAGTGTGCTTATGGCTTCTCCAACTCCACCGAAGGTATGGAGAAGACATGGGTTATCA
CGGCATTACAGATATTGCGTTCTCAAGGCTTGTAGATTCAAGGAGGTCCCGGGAGATAAAGTTTCGTCCAATACCCCCAGCTGCAACCTCTTCATTGGTGGGAGGCACTG
AATTCAAGTCCATGGTTATTAAAACCAAAGGCGCAGCTGGGAAGCTCTCCTGCGTAGAGAGCTTGAATAAGAGGCTGGGACTGAGGGGCTTGAGCGAAAGGAAGGAGCTG
GTCACGAAGAACAAGATTCGCATGGACCAACTTCGAACATCTCCACCTTCTTGCCCGCCATACCCCAACTTTTCTGCTCTTTCTTTTTGTGGAGTTTTGGTGCAATTAAG
GGAGAAGACATGGGTTATCTCTTTGTTCTTCGGATTTCCTCGAAAAATTGATAGAGTTTGCTCGTCCAGGGATTCTCTTGCTGACCTGATTCTCTGGATAACCACATCAA
CCACCATGTGTGATGTTGAACATGCTAAGATGCTTCTTAAGGCTTCGTCTGTGGAGCTTGAGCAATAG
mRNA sequenceShow/hide mRNA sequence
TGGATAACACCAACGGAGAGGTTGGAAGGGATACTCTTCGCTGATATCATTCACAGCACAGAGACCAAATGGATGGCAATGGTTCCATAAACAATGAACTACACGGAAAG
GTTGCATCAGCAGTGTGCTTATGGCTTCTCCAACTCCACCGAAGGTATGGAGAAGACATGGGTTATCACGGCATTACAGATATTGCGTTCTCAAGGCTTGTAGATTCAAG
GAGGTCCCGGGAGATAAAGTTTCGTCCAATACCCCCAGCTGCAACCTCTTCATTGGTGGGAGGCACTGAATTCAAGTCCATGGTTATTAAAACCAAAGGCGCAGCTGGGA
AGCTCTCCTGCGTAGAGAGCTTGAATAAGAGGCTGGGACTGAGGGGCTTGAGCGAAAGGAAGGAGCTGGTCACGAAGAACAAGATTCGCATGGACCAACTTCGAACATCT
CCACCTTCTTGCCCGCCATACCCCAACTTTTCTGCTCTTTCTTTTTGTGGAGTTTTGGTGCAATTAAGGGAGAAGACATGGGTTATCTCTTTGTTCTTCGGATTTCCTCG
AAAAATTGATAGAGTTTGCTCGTCCAGGGATTCTCTTGCTGACCTGATTCTCTGGATAACCACATCAACCACCATGTGTGATGTTGAACATGCTAAGATGCTTCTTAAGG
CTTCGTCTGTGGAGCTTGAGCAATAG
Protein sequenceShow/hide protein sequence
MDGNGSINNELHGKVASAVCLWLLQLHRRYGEDMGYHGITDIAFSRLVDSRRSREIKFRPIPPAATSSLVGGTEFKSMVIKTKGAAGKLSCVESLNKRLGLRGLSERKEL
VTKNKIRMDQLRTSPPSCPPYPNFSALSFCGVLVQLREKTWVISLFFGFPRKIDRVCSSRDSLADLILWITTSTTMCDVEHAKMLLKASSVELEQ