CuGenDBv2

Gene ID	Carg24301
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Eukaryotic translation initiation factor 6
Genome location	Carg_Chr20:9829432..9832732
RNA-Seq Expression	Carg24301
Synteny	Carg24301
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7011104.1 Eukaryotic translation initiation factor 6-2 [Cucurbita argyrosperma subsp. argyrosperma]

4.3e-129

100

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Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTCDRVIGDRERFQIEGGSTKLHC
        DWTAFCGSDTTCDRVIGDRERFQIEGGSTKLHC
Subjt:  DWTAFCGSDTTCDRVIGDRERFQIEGGSTKLHC

XP_022931983.1 eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]

6.0e-115

93.83

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTCDRVIGDRERFQIEGG
        DWTAFCGSDTT   +      F++  G
Subjt:  DWTAFCGSDTTCDRVIGDRERFQIEGG

XP_022973842.1 eukaryotic translation initiation factor 6-2 [Cucurbita maxima]

1.7e-114

100

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Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DWTAFCGSDTT
Subjt:  DWTAFCGSDTT

XP_038880643.1 eukaryotic translation initiation factor 6-2-like [Benincasa hispida]

8.1e-112

97.16

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Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DW AFCGSDTT
Subjt:  DWTAFCGSDTT

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

4.8e-112

97.16

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Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DWTAFCGSDTT
Subjt:  DWTAFCGSDTT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D392 Eukaryotic translation initiation factor 6

5.1e-112

97.63

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DW AFCGSDTT
Subjt:  DWTAFCGSDTT

A0A6J1F0A8 Eukaryotic translation initiation factor 6

2.9e-115

93.83

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTCDRVIGDRERFQIEGG
        DWTAFCGSDTT   +      F++  G
Subjt:  DWTAFCGSDTTCDRVIGDRERFQIEGG

A0A6J1G8F7 Eukaryotic translation initiation factor 6

5.1e-112

97.16

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Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DWTAFCGSDTT
Subjt:  DWTAFCGSDTT

A0A6J1I8L9 Eukaryotic translation initiation factor 6

8.5e-115

100

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DWTAFCGSDTT
Subjt:  DWTAFCGSDTT

A0A6J1L2F0 Eukaryotic translation initiation factor 6

5.1e-112

97.16

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DWTAFCGSDTT
Subjt:  DWTAFCGSDTT

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

2.4e-90

75.83

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DW AFCG DTT
Subjt:  DWTAFCGSDTT

O81920 Eukaryotic translation initiation factor 6 (Fragment)

1.4e-90

85.49

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYS FE+EL   IPVVKTSI GTRIIG     NKNGLLVPHTTTDQELQHLRN LPD VVVQRI+E+
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI
        LSALGN I+CND+VALTHTDLD+ETEELIADVLGVEVF QT+AGN+LVGSYC+ TN+GGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI

P56537 Eukaryotic translation initiation factor 6

7.0e-90

75.83

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DW AFCG DTT
Subjt:  DWTAFCGSDTT

Q9M060 Eukaryotic translation initiation factor 6-2

6.9e-106

87.2

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFESEL  VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN I+CND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DWT+FCGSDTT
Subjt:  DWTAFCGSDTT

Q9TU47 Eukaryotic translation initiation factor 6

2.4e-90

75.83

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RN LPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DW AFCG DTT
Subjt:  DWTAFCGSDTT

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

1.1e-82

69.01

Show/hide

Query:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ
        MATRL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +ES+L GVIP+V TSI G+  IG LC GNKNGLL+ HT TDQELQHLR+SLPD+VVVQRI+
Subjt:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ

Query:  ERLSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI
        E + ALGN I+CND+VAL H  L+++TEE+I+DVLGVEV+RQT+A N LVGSYCS +N GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI+AGL 
Subjt:  ERLSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI

Query:  ANDWTAFCGSDTT
         NDWTAFCGSDTT
Subjt:  ANDWTAFCGSDTT

AT3G55620.1 Translation initiation factor IF6

4.9e-107

87.2

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFESEL  VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN I+CND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTT
        DWT+FCGSDTT
Subjt:  DWTAFCGSDTT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGACCAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACAAATGCTTATTGCTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTGC
CTTTGAATCTGAATTAGGCGGTGTCATTCCGGTCGTTAAAACATCCATCGATGGCACGCGCATTATTGGTCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCAC
ACACCACTACTGATCAAGAACTTCAGCATTTGAGAAACAGCCTACCTGACCAAGTTGTTGTCCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACAATTTCTTGT
AATGATCATGTTGCTCTCACACATACTGATCTCGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACGGTAGCAGGCAACGTTCT
CGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCCATTGAAGATTTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTG
GAACAGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGATAGCAAATGACTGGACTGCATTTTGTGGTTCAGACACGACCTGCGACCGAGTTATCGGTGATCGAGAG
CGTTTTCAAATTGAGGGAGGCTCAACCAAGCTCCATTGTTGA

mRNA sequence

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CGGACGCCGTCTCAGCGGCCGCCGCCGCACGCTGCAATCCCTCTCCCATTCTCTGGCCTCTCCCAGCAATCGGAGTTACTTATCTCTGTTTTATTTTCTCAGAAACACGG
TGGTTCAGCCCCTAATCCGCGCCATTCGTAGGATCCTACCGCTGCCGCTCATTTTCGGATCCCCTAGGGGTTGCAAGGGATTTTGAATTTATCGTCGAGGAAGGTAGTTG
TTAATTGAAGGTTATCTTGTGCTACCATGGCGACCAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACAAATGCTTATTGCTTGGTTGCAATT
GGTGGCTCTGAGAACTTCTACAGTGCCTTTGAATCTGAATTAGGCGGTGTCATTCCGGTCGTTAAAACATCCATCGATGGCACGCGCATTATTGGTCGTCTATGTGCTGG
AAACAAAAATGGGCTTCTTGTACCACACACCACTACTGATCAAGAACTTCAGCATTTGAGAAACAGCCTACCTGACCAAGTTGTTGTCCAACGTATACAAGAGAGACTGT
CTGCTCTGGGGAATACAATTTCTTGTAATGATCATGTTGCTCTCACACATACTGATCTCGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTT
AGGCAGACGGTAGCAGGCAACGTTCTCGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCCATTGAAGATTTGGATGAGCTATCAAC
CCTTCTTCAGGTCCCTTTAGTTGCTGGAACAGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGATAGCAAATGACTGGACTGCATTTTGTGGTTCAGACACGACCT
GCGACCGAGTTATCGGTGATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGCTCCATTGTTGATGAAATGAGGAAGTCGCTAATAGACAGTTACGTGTGAAGTGT
CATGTAATGCTACACCTGATTCTTGCAAGCAAGCAATTGTTATTACTGCTGCCTTTTTCCTTTTGTTATATTTAACAACTTTGTGGAGTGTGTAATTCGACTCTGCCCTT
AATAGTGTTTTGGTTGAAATTGGGATCCATATTTGCTATTATACATCTGTT

Protein sequence

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MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISC
NDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIANDWTAFCGSDTTCDRVIGDRE
RFQIEGGSTKLHC

Carg24301 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome