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Carg24312 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24312
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr20:9945613..9946056
RNA-Seq ExpressionCarg24312
SyntenyCarg24312
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571341.1 hypothetical protein SDJN03_30256, partial [Cucurbita argyrosperma subsp. sororia]6.8e-7299.32Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNSS
        MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA SANDTNDDDNNNNNSS
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNSS

Query:  GESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        GESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
Subjt:  GESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

KAG7011114.1 hypothetical protein SDJN02_27912, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-72100Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNSS
        MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNSS
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNSS

Query:  GESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        GESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
Subjt:  GESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

XP_008460874.1 PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo]3.5e-4467.55Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN
        MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPE+EST WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSL        N+ ND++NNNNN
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN

Query:  --SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
          SS ESPR D   +  ED NN DQR+SN SSNNSI+SRESE+P AI+M S
Subjt:  --SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

XP_022931986.1 uncharacterized protein LOC111438319 [Cucurbita moschata]3.4e-7199.32Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDD-NNNNNS
        MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDD NNNNNS
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDD-NNNNNS

Query:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
Subjt:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

XP_038900833.1 uncharacterized protein LOC120087896 [Benincasa hispida]1.6e-4468.87Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTN---DDDNNNN
        MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPETE+TAWLPVAGLSLVCLPWFFW+LTFFYRVISRACGFRVS+ +       N   +++NNNN
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTN---DDDNNNN

Query:  NSSGESPRCDARAQA-EEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        N+S ESPR D   +  EED +N DQRRSN SSNNSI SRESE+P AI+MGS
Subjt:  NSSGESPRCDARAQA-EEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

TrEMBL top hitse value%identityAlignment
A0A0A0LJX6 Uncharacterized protein8.4e-4468Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN
        MSLV+PSAGRAF+W V   LF  ILSGG CLL+Y+ILPETE+TAWLP+ GLSLVCLPWFFW+LTFFYRV+SRACGFRVSL +    S+N+ N ++NNNNN
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN

Query:  -SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
         SS ES + D   +  ED NN DQR SN SSNNSI+SRESE+P AI+M S
Subjt:  -SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

A0A1S3CDW9 Uncharacterized protein1.7e-4467.55Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN
        MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPE+EST WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSL        N+ ND++NNNNN
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN

Query:  --SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
          SS ESPR D   +  ED NN DQR+SN SSNNSI+SRESE+P AI+M S
Subjt:  --SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

A0A5A7TCV0 Uncharacterized protein1.7e-4467.55Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN
        MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPE+EST WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSL        N+ ND++NNNNN
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN

Query:  --SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
          SS ESPR D   +  ED NN DQR+SN SSNNSI+SRESE+P AI+M S
Subjt:  --SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

A0A6J1EV39 uncharacterized protein LOC1114383191.6e-7199.32Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDD-NNNNNS
        MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDD NNNNNS
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDD-NNNNNS

Query:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
Subjt:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

A0A6J1G7P7 uncharacterized protein LOC1114515882.1e-3965.1Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSAN-DTNDDDNNNNNS
        MSLVDPS GR  +W V F LFL +LSGG CLL+YI LPETE+TAWLPVAGLSLVCLPWFFW LTF YR+ISRACGFRVSL +  + +    +++N +NN+
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSAN-DTNDDDNNNNNS

Query:  SGESPRCDARAQA-EEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
          ESP+ DA  QA +EDGN   QR+SN SSN+S  SRESE P AI+MGS
Subjt:  SGESPRCDARAQA-EEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30770.1 Putative membrane lipoprotein1.4e-1942.14Show/hide
Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDD----DNNN
        M + DP AG+AF+  +   LFL I  GG CL+ Y ILP      WL   G+  VCLPWFFWILTF YR++SR  GFR+ +    + N+ N +    D + 
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDD----DNNN

Query:  NNSSGESPRCD-----ARAQAE---EDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
           S ESP  D     A  Q +       N  ++R + SSN++I S ESE+P AISM S
Subjt:  NNSSGESPRCD-----ARAQAE---EDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGGTCGATCCCTCAGCTGGACGTGCATTCGTATGGTTCGTCTTTTTCTCTCTCTTCCTCTGCATTCTCAGCGGCGGAGCTTGCCTTTTGGTGTACATAATCCT
ACCGGAGACCGAATCCACCGCATGGCTACCAGTCGCTGGCTTGTCGTTGGTTTGTCTCCCTTGGTTCTTTTGGATCTTGACCTTCTTCTATAGAGTCATCTCGCGTGCAT
GTGGTTTTCGAGTCTCCCTTGCCATGGCCACGAGTGCAAATGATACGAACGACGACGACAACAATAATAATAATTCGTCTGGTGAATCCCCTCGATGCGATGCAAGGGCT
CAAGCAGAGGAGGATGGCAACAATGACGATCAAAGGCGAAGCAATTTGTCGTCCAACAACTCGATAATGTCTCGTGAGAGTGAAATTCCATTTGCCATATCAATGGGGTC
GTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTGGTCGATCCCTCAGCTGGACGTGCATTCGTATGGTTCGTCTTTTTCTCTCTCTTCCTCTGCATTCTCAGCGGCGGAGCTTGCCTTTTGGTGTACATAATCCT
ACCGGAGACCGAATCCACCGCATGGCTACCAGTCGCTGGCTTGTCGTTGGTTTGTCTCCCTTGGTTCTTTTGGATCTTGACCTTCTTCTATAGAGTCATCTCGCGTGCAT
GTGGTTTTCGAGTCTCCCTTGCCATGGCCACGAGTGCAAATGATACGAACGACGACGACAACAATAATAATAATTCGTCTGGTGAATCCCCTCGATGCGATGCAAGGGCT
CAAGCAGAGGAGGATGGCAACAATGACGATCAAAGGCGAAGCAATTTGTCGTCCAACAACTCGATAATGTCTCGTGAGAGTGAAATTCCATTTGCCATATCAATGGGGTC
GTGA
Protein sequenceShow/hide protein sequence
MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNSSGESPRCDARA
QAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS