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Carg24322 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24322
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHistone-lysine N-methyltransferase ATXR5
Genome locationCarg_Chr20:10054284..10055106
RNA-Seq ExpressionCarg24322
SyntenyCarg24322
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001214 - SET domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011124.1 putative Histone-lysine N-methyltransferase ATXR5, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-60100Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYEYDYPTHHFV
Subjt:  GYEYDYPTHHFV

XP_008460909.1 PREDICTED: probable Histone-lysine N-methyltransferase ATXR5 [Cucumis melo]6.5e-5996.43Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDYLKNREHDDCDSMMTLLS KDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYN+NGECRVILVAI+DIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYEY+YPTHHFV
Subjt:  GYEYDYPTHHFV

XP_022932012.1 probable Histone-lysine N-methyltransferase ATXR5 isoform X1 [Cucurbita moschata]2.0e-60100Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYEYDYPTHHFV
Subjt:  GYEYDYPTHHFV

XP_022971734.1 probable Histone-lysine N-methyltransferase ATXR5 isoform X2 [Cucurbita maxima]4.5e-6099.11Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPD+RGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYEYDYPTHHFV
Subjt:  GYEYDYPTHHFV

XP_023512355.1 probable Histone-lysine N-methyltransferase ATXR5 isoform X2 [Cucurbita pepo subsp. pepo]2.0e-60100Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYEYDYPTHHFV
Subjt:  GYEYDYPTHHFV

TrEMBL top hitse value%identityAlignment
A0A0A0LM82 Uncharacterized protein1.6e-5895.54Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDYLKNREHDDCDSMMTLLS KDPSRSLVICPD RGNIARFINGINNHSPEGKKKQNCKCVRYN+NGECRVILVAI+DIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYEY+YPTHHFV
Subjt:  GYEYDYPTHHFV

A0A1S3CDI2 probable Histone-lysine N-methyltransferase ATXR53.2e-5996.43Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDYLKNREHDDCDSMMTLLS KDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYN+NGECRVILVAI+DIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYEY+YPTHHFV
Subjt:  GYEYDYPTHHFV

A0A5A7TGI0 Putative Histone-lysine N-methyltransferase ATXR53.2e-5996.43Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDYLKNREHDDCDSMMTLLS KDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYN+NGECRVILVAI+DIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYEY+YPTHHFV
Subjt:  GYEYDYPTHHFV

A0A6J1EVF9 probable Histone-lysine N-methyltransferase ATXR5 isoform X19.8e-61100Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYEYDYPTHHFV
Subjt:  GYEYDYPTHHFV

A0A6J1I9E4 probable Histone-lysine N-methyltransferase ATXR5 isoform X22.2e-6099.11Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPD+RGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYEYDYPTHHFV
Subjt:  GYEYDYPTHHFV

SwissProt top hitse value%identityAlignment
B9RU15 Probable Histone-lysine N-methyltransferase ATXR51.0e-5484.82Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        MTFIAEYTGDVDY++NREHDDCDSMMTLL AKDPS+SLVICPD+RGNIARFI+GINNH+ +GKKKQNCKCVRY++NGECRV LVA +DIAKGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYE++YPT HFV
Subjt:  GYEYDYPTHHFV

Q8VZJ1 Histone-lysine N-methyltransferase ATXR53.6e-5280.36Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        +TFIAEYTGDVDYLKNRE DDCDS+MTLL ++DPS++LVICPD+ GNI+RFINGINNH+P  KKKQNCKCVRY+INGECRV+LVA +DI+KGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYE++YPTHHF+
Subjt:  GYEYDYPTHHFV

Q99MY8 Histone-lysine N-methyltransferase ASH1L3.3e-0533.64Show/hide
Query:  FIAEYTGDV---DYLKNR----EHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERL
        FI EY G+V      +NR     H+  D     L +      +VI   R GN ARFI    NHS +     NC+  ++++NG  R+ L A++D+  G  L
Subjt:  FIAEYTGDV---DYLKNR----EHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERL

Query:  YYDYNGYEYD
         YDYN + ++
Subjt:  YYDYNGYEYD

Q9FNE9 Histone-lysine N-methyltransferase ATXR63.0e-4678.57Show/hide
Query:  TFIAEYTGDVDYLKNREHD-DCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        T I EY GDVDYL NRE D D DSMMTLL A DPS+ LVICPDRR NIARFI+GINNHSPEG+KKQN KCVR+NINGE RV+LVA +DI+KGERLYYDYN
Subjt:  TFIAEYTGDVDYLKNREHD-DCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYE++YPT HFV
Subjt:  GYEYDYPTHHFV

Q9NR48 Histone-lysine N-methyltransferase ASH1L3.3e-0533.64Show/hide
Query:  FIAEYTGDV---DYLKNR----EHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERL
        FI EY G+V      +NR     H+  D     L +      +VI   R GN ARFI    NHS +     NC+  ++++NG  R+ L A++D+  G  L
Subjt:  FIAEYTGDV---DYLKNR----EHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERL

Query:  YYDYNGYEYD
         YDYN + ++
Subjt:  YYDYNGYEYD

Arabidopsis top hitse value%identityAlignment
AT1G77300.1 histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)1.5e-0540.32Show/hide
Query:  VICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        VI    +GN+ RFI    NHS E     NC+  ++ +NGE  V + ++QD+ KG+ L +DYN
Subjt:  VICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

AT1G77300.2 histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)1.5e-0540.32Show/hide
Query:  VICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        VI    +GN+ RFI    NHS E     NC+  ++ +NGE  V + ++QD+ KG+ L +DYN
Subjt:  VICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

AT5G09790.1 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 52.6e-5380.36Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        +TFIAEYTGDVDYLKNRE DDCDS+MTLL ++DPS++LVICPD+ GNI+RFINGINNH+P  KKKQNCKCVRY+INGECRV+LVA +DI+KGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYE++YPTHHF+
Subjt:  GYEYDYPTHHFV

AT5G09790.2 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 52.6e-5380.36Show/hide
Query:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        +TFIAEYTGDVDYLKNRE DDCDS+MTLL ++DPS++LVICPD+ GNI+RFINGINNH+P  KKKQNCKCVRY+INGECRV+LVA +DI+KGERLYYDYN
Subjt:  MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYE++YPTHHF+
Subjt:  GYEYDYPTHHFV

AT5G24330.1 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 62.1e-4778.57Show/hide
Query:  TFIAEYTGDVDYLKNREHD-DCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN
        T I EY GDVDYL NRE D D DSMMTLL A DPS+ LVICPDRR NIARFI+GINNHSPEG+KKQN KCVR+NINGE RV+LVA +DI+KGERLYYDYN
Subjt:  TFIAEYTGDVDYLKNREHD-DCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYN

Query:  GYEYDYPTHHFV
        GYE++YPT HFV
Subjt:  GYEYDYPTHHFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTTTATTGCCGAATATACTGGTGACGTGGATTATCTTAAAAACCGTGAACACGATGATTGTGATAGTATGATGACCCTTCTTTCAGCAAAAGATCCATCTAGGAG
TCTTGTCATCTGCCCCGACAGACGTGGAAACATCGCTCGGTTTATTAATGGAATAAATAATCATTCTCCAGAAGGTAAGAAGAAACAGAACTGTAAATGTGTGAGATACA
ATATTAACGGCGAATGCCGGGTGATTTTGGTTGCTATTCAGGATATTGCTAAAGGGGAGAGGCTTTATTATGACTACAATGGATATGAGTATGATTACCCTACTCATCAT
TTCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTTTATTGCCGAATATACTGGTGACGTGGATTATCTTAAAAACCGTGAACACGATGATTGTGATAGTATGATGACCCTTCTTTCAGCAAAAGATCCATCTAGGAG
TCTTGTCATCTGCCCCGACAGACGTGGAAACATCGCTCGGTTTATTAATGGAATAAATAATCATTCTCCAGAAGGTAAGAAGAAACAGAACTGTAAATGTGTGAGATACA
ATATTAACGGCGAATGCCGGGTGATTTTGGTTGCTATTCAGGATATTGCTAAAGGGGAGAGGCTTTATTATGACTACAATGGATATGAGTATGATTACCCTACTCATCAT
TTCGTTTGAGAATATCTTAGGATACTTCTAACAATTTTGGGATTTGATTTGTCCCATACAGTTTTTTCTCCATTTTCTTATGCTGAATCTTGTTGCTAAGTCAACAGTTT
TTGCTGATTCTATCAGAGTAATTTGTGTTACATTTCCTCGGCTGAGGACAGGAGGAAGGGAGGGAGGGACGGTGGGGGTAGGGATGCCGATTTTTCCGAGTTTTGGTAGT
GTAGAACAAAACTCAGGGGTCCTAGAAGTTCATCTGTTAGGTA
Protein sequenceShow/hide protein sequence
MTFIAEYTGDVDYLKNREHDDCDSMMTLLSAKDPSRSLVICPDRRGNIARFINGINNHSPEGKKKQNCKCVRYNINGECRVILVAIQDIAKGERLYYDYNGYEYDYPTHH
FV