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Carg24326 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24326
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUPF0235 protein C15orf40 homolog
Genome locationCarg_Chr20:10160768..10161664
RNA-Seq ExpressionCarg24326
SyntenyCarg24326
Gene Ontology termsNA
InterPro domainsIPR003746 - Protein of unknown function DUF167
IPR036591 - YggU-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571356.1 hypothetical protein SDJN03_30271, partial [Cucurbita argyrosperma subsp. sororia]1.8e-37100Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

KAG7011128.1 hypothetical protein SDJN02_27926 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-49100Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVSWAFFAAYYLISNC
        MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVSWAFFAAYYLISNC
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVSWAFFAAYYLISNC

Query:  FFIPST
        FFIPST
Subjt:  FFIPST

XP_022927983.1 uncharacterized protein LOC111434889 [Cucurbita moschata]5.6e-3697.67Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        MAPAKKGKTKA KGTES ESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

XP_022971730.1 UPF0235 protein C15orf40 homolog [Cucurbita maxima]1.8e-3494.19Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        MAPAKKGKTKAPK TESI+S LK NNYPSCLRSVSSSS+AITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

XP_023512400.1 UPF0235 protein C15orf40 homolog [Cucurbita pepo subsp. pepo]1.8e-37100Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

TrEMBL top hitse value%identityAlignment
A0A0A0LMY2 Uncharacterized protein1.3e-3391.86Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        M PAKKGKTKAPK TESI+S +K+NNYPSCLRSVS SSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

A0A1S3CDI8 UPF0235 protein LHK_031812.8e-3391.86Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        M PAKKGKTKAPK TESI+S +KTNNYPSCLRSVS SSVAITIHAKPGSKIASITDF DDALGVQIDAPAKDGEANAALLDYMSSV
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

A0A6J1CR98 uncharacterized protein LOC1110134515.5e-2984.88Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        M PAKKGKTKAPK TESI+S    N +PSCLRSV+ SSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDY+S+V
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

A0A6J1EMK4 uncharacterized protein LOC1114348892.7e-3697.67Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        MAPAKKGKTKA KGTES ESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

A0A6J1I6J5 UPF0235 protein C15orf40 homolog8.8e-3594.19Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        MAPAKKGKTKAPK TESI+S LK NNYPSCLRSVSSSS+AITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

SwissProt top hitse value%identityAlignment
Q3ZBP8 UPF0235 protein C15orf40 homolog8.3e-0654.17Show/hide
Query:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        V+I IHAKPGSK  ++TD   +A+ V I AP  +GEANA L  Y+S V
Subjt:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

Q505I4 UPF0235 protein C15orf40 homolog9.7e-0753.85Show/hide
Query:  SSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        S   V I IHAKPGSK  ++TD   +A+GV I AP  +GEANA L  Y+S V
Subjt:  SSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

Q8WUR7 UPF0235 protein C15orf408.3e-0654.17Show/hide
Query:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        V I IHAKPGSK  ++TD   +A+ V I AP  +GEANA L  Y+S V
Subjt:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

Q9CRC3 UPF0235 protein C15orf40 homolog1.7e-0654.17Show/hide
Query:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        V I IHAKPGS+  ++TD   +A+GV I AP  +GEANA L  Y+S V
Subjt:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV

Arabidopsis top hitse value%identityAlignment
AT1G49170.1 Protein of unknown function (DUF167)1.3e-2266.28Show/hide
Query:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV
        MAP KKGK K     ES  +  +++++P+CLR ++ SSVAITIHAKPGSK ASITD  D+A+GVQIDAPA+DGEANAALL+YMSSV
Subjt:  MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGGCGAAGAAGGGGAAAACGAAAGCTCCGAAAGGTACTGAATCAATTGAATCGTGCCTCAAAACCAACAATTACCCTTCTTGTCTTCGCTCTGTTTCTTCTTC
TTCTGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGACTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCACCTGCGAAAGATGGAG
AAGCTAATGCTGCGCTTCTTGATTACATGAGCTCTGTGAGTTGGGCATTCTTTGCTGCTTATTATTTGATTTCGAATTGCTTTTTCATTCCTAGTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTTGGAGGAAAATATTAAAAATTAAAGGGAGAAGAAAATGGCTCCGGCGAAGAAGGGGAAAACGAAAGCTCCGAAAGGTACTGAATCAATTGAATCGTGCCTCAAAA
CCAACAATTACCCTTCTTGTCTTCGCTCTGTTTCTTCTTCTTCTGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGACTTTGGCGATGAT
GCGTTGGGAGTGCAAATCGACGCACCTGCGAAAGATGGAGAAGCTAATGCTGCGCTTCTTGATTACATGAGCTCTGTGAGTTGGGCATTCTTTGCTGCTTATTATTTGAT
TTCGAATTGCTTTTTCATTCCTAGTACTTGAATTTTCATTGCGCCATTTAACCATTTGGCTTAAAGTTGAAATTGATTGTTTTTGTTGTTTGGGATTTTTGGTGAAGATT
CCGAAAATTGGAACTGTTTTGAGCGTATTGGTCTAGCGAACGGATAATGTTGCTGTTCTTAGTTTGTTGAAAATCCGGTGTTGGATCACCCATTTGAATTTGAAGGCTGT
TATTCCTGTTGCTCGAAGGATTTGAAGTCTTCTATCTACTTGCTGTGTAGTATTTTCGATCTTCGTTGTTTAAATCTTCACACATGTTGACAGTAGTAGCTATATGATTC
CCAAATCAGAAAAGTTGGATGAATTACCAACAATAGCTTTTAGTTTCCTGGCAGTTTTTATGTGAGATCCCACATCGATTGAACGAATGCCAACGAGGACGCTAGGTCCC
GAAGGGGTGGATTGTGAGATCCCACGTTGGTTGAAGGGGGGAACAAAGCA
Protein sequenceShow/hide protein sequence
MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVSWAFFAAYYLISNCFFIPST