; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24327 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24327
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCarg_Chr20:10177695..10178342
RNA-Seq ExpressionCarg24327
SyntenyCarg24327
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044602 - RING-H2 finger protein ATL10/ATL75-79


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571357.1 RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. sororia]1.1e-118100Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST
        MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN
        TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN

Query:  LAPLDPEARVRNLWL
        LAPLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

XP_022927999.1 RING-H2 finger protein ATL78-like [Cucurbita moschata]2.0e-11798.6Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST
        MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD+THPSST
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN
        TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV GP SPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN

Query:  LAPLDPEARVRNLWL
        LAPLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

XP_022971702.1 RING-H2 finger protein ATL78-like [Cucurbita maxima]2.0e-11293.95Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST
        MSA SISSPHQLIHHGDQVFYYSRKLLLHSSL  L+FTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD+ HPSS 
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN
        T+AP+GVHKKAIKSFTMVQF+ DLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV GP SPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN

Query:  LAPLDPEARVRNLWL
        LAPLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

XP_023512393.1 RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo]2.9e-11697.67Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST
        MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD+ HPSST
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN
        T+APVGVHKKAIKSFTMVQFS DLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN

Query:  LAPLDPEARVRNLWL
        L PLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

XP_038901957.1 RING-H2 finger protein ATL78-like [Benincasa hispida]4.2e-7873.89Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVS
        MSA SIS+ H       + F+YSRKLLLH SLH L+FTA APS+ LH   E Y        TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFV+S
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVS

Query:  DETHPSSTTA-APVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV-SG
        D+   SS+TA A  GVHKKAIKSFT+VQFS +LNLPGLDSECVICLSDF  GEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLV T QKIAGV + 
Subjt:  DETHPSSTTA-APVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV-SG

Query:  PASPPPPA-INLAPLDPEARVRNLWL
          SPPPPA + +APLD EA VRNL L
Subjt:  PASPPPPA-INLAPLDPEARVRNLWL

TrEMBL top hitse value%identityAlignment
A0A0A0LQ73 RING-type E3 ubiquitin transferase8.7e-7466.81Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTF--TADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVS
        MS  SIS+ + L     QVF+YSRKLLLHSSLH L+F  T+ AP S +H   E Y      TFDTNVVMVLSVLLCALICSL LNSIIRCALKCSR +VS
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTF--TADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVS

Query:  DETHPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVS---
        ++ H    T    GVHKKAIKSFT+VQFS DLNLPGLD ECVICLS+F  G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT +KIAGV+   
Subjt:  DETHPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVS---

Query:  ----------GPASPPPPA--INLAPLDPEARVRNLWL
                   P+ PPPP+  ++LAPL+PEA VRNL L
Subjt:  ----------GPASPPPPA--INLAPLDPEARVRNLWL

A0A1S3CDJ3 RING-type E3 ubiquitin transferase3.2e-7669.49Show/hide
Query:  VSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDE--T
        +SI++    IHH  +VF YSRKLLLHSSLH L+FTA APS+V H   E Y      TFDTNVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS++   
Subjt:  VSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDE--T

Query:  HPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV-------
        HP+ T+    GVHKKAIKSFT+VQFS DLNLPGLDSECVICLS+FV G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT +KIAGV       
Subjt:  HPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV-------

Query:  -------SGPASPPPPA--INLAPLDPEARVRNLWL
               S P  PPPP+  +NLAPL+PEA VRNL L
Subjt:  -------SGPASPPPPA--INLAPLDPEARVRNLWL

A0A5A7TCX2 RING-type E3 ubiquitin transferase3.2e-7669.49Show/hide
Query:  VSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDE--T
        +SI++    IHH  +VF YSRKLLLHSSLH L+FTA APS+V H   E Y      TFDTNVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS++   
Subjt:  VSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDE--T

Query:  HPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV-------
        HP+ T+    GVHKKAIKSFT+VQFS DLNLPGLDSECVICLS+FV G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT +KIAGV       
Subjt:  HPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV-------

Query:  -------SGPASPPPPA--INLAPLDPEARVRNLWL
               S P  PPPP+  +NLAPL+PEA VRNL L
Subjt:  -------SGPASPPPPA--INLAPLDPEARVRNLWL

A0A6J1EJK6 RING-type E3 ubiquitin transferase9.9e-11898.6Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST
        MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD+THPSST
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN
        TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV GP SPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN

Query:  LAPLDPEARVRNLWL
        LAPLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

A0A6J1I2P6 RING-type E3 ubiquitin transferase9.6e-11393.95Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST
        MSA SISSPHQLIHHGDQVFYYSRKLLLHSSL  L+FTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD+ HPSS 
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN
        T+AP+GVHKKAIKSFTMVQF+ DLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV GP SPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAIN

Query:  LAPLDPEARVRNLWL
        LAPLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL104.1e-4449.31Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RFVVSDETHP
        MSA  + S  Q         + SRKLLLH+     T  A A   V   PL ++      NV+M+LS+L+C +IC LGL+ IIRCAL+ S RF++S+    
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RFVVSDETHP

Query:  SSTT--AAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG-----VSG
         S+T  ++  G+ KKA++ F +V +S ++NLPGLD ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+T QKI G      S 
Subjt:  SSTT--AAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG-----VSG

Query:  PASPPPPAI-NLAPLDP
         A P    I  + PL+P
Subjt:  PASPPPPAI-NLAPLDP

Q6NML0 E3 ubiquitin-protein ligase ATL763.7e-4547.06Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSL--HALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDETHP
        MSA  + +  Q +       + +RKLLLH     ++L   A APS ++           NV+M+LSVL+C +IC LGL+ IIRCA  + SRF++S+    
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSL--HALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDETHP

Query:  SST--TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VSGP
         ST  +++  G+ KKA++ F +V +S ++NLPG+  ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+T QKI G        
Subjt:  SST--TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VSGP

Query:  ASPPPPA--INLAPLDPEARV
        AS P  +  + + PL+PE RV
Subjt:  ASPPPPA--INLAPLDPEARV

Q6NQG7 RING-H2 finger protein ATL781.3e-5056Show/hide
Query:  YSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD---ETHPSSTTAAPVGVHKKAIKSFTMV
        YSRKLL H+   + T    APS      +    FD NVVMVLSVLLCAL+CSLGLNSIIRCAL+CS  V S+   + +P   T    GV +KA+KSF  V
Subjt:  YSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD---ETHPSSTTAAPVGVHKKAIKSFTMV

Query:  QFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPAS-----PPPPAI--NLAPLDPEARVR
         +S++LNLPGLD+EC ICLS+FV  E+++LLP C+HGFHV+CIDKWLSSHSSCP CR CL+QT +KIA  S  +S     PP  +I   +APL+PE  +R
Subjt:  QFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPAS-----PPPPAI--NLAPLDPEARVR

Q94BY6 RING-H2 finger protein ATL759.1e-4449.51Show/hide
Query:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDETHPSSTT--AAPVGVHKKAIKSF
        + SRKLLLH+     T  A A   V   PL ++      NV+M+LSVL+C +IC LGL+ IIRCA  + S F++S+     ST   ++  G++KKA++ F
Subjt:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDETHPSSTT--AAPVGVHKKAIKSF

Query:  TMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPA---SPPPPA---INLAPLDPEAR
         +V +S ++NLPGL  ECVICLSDFV GE++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+T QKI G    A   +  P A   + +APL+PE R
Subjt:  TMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPA---SPPPPA---INLAPLDPEAR

Query:  VRNL
        V  L
Subjt:  VRNL

Q9LS99 RING-H2 finger protein ATL771.9e-4148Show/hide
Query:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-FVVSDETHPSST---TAAPVGVHKKAIKSFT
        + SRKL     L  + F  +A  +  H P +      NV+M+LS+LLC +ICSLGL+ IIRCA   SR F++SD     ST   ++   G+ KKA+K   
Subjt:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-FVVSDETHPSST---TAAPVGVHKKAIKSFT

Query:  MVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPA------INLAPLDPEARV
        +V +S ++NLPG+  ECVICLSDFV GE+LR+LPKCNHGFH++CIDKWL+ H +CPKCR CLV T QK+      A            I ++PL+PEARV
Subjt:  MVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPA------INLAPLDPEARV

Arabidopsis top hitse value%identityAlignment
AT1G49200.1 RING/U-box superfamily protein6.5e-4549.51Show/hide
Query:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDETHPSSTT--AAPVGVHKKAIKSF
        + SRKLLLH+     T  A A   V   PL ++      NV+M+LSVL+C +IC LGL+ IIRCA  + S F++S+     ST   ++  G++KKA++ F
Subjt:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDETHPSSTT--AAPVGVHKKAIKSF

Query:  TMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPA---SPPPPA---INLAPLDPEAR
         +V +S ++NLPGL  ECVICLSDFV GE++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+T QKI G    A   +  P A   + +APL+PE R
Subjt:  TMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPA---SPPPPA---INLAPLDPEAR

Query:  VRNL
        V  L
Subjt:  VRNL

AT1G49210.1 RING/U-box superfamily protein2.6e-4647.06Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSL--HALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDETHP
        MSA  + +  Q +       + +RKLLLH     ++L   A APS ++           NV+M+LSVL+C +IC LGL+ IIRCA  + SRF++S+    
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSL--HALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDETHP

Query:  SST--TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VSGP
         ST  +++  G+ KKA++ F +V +S ++NLPG+  ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+T QKI G        
Subjt:  SST--TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VSGP

Query:  ASPPPPA--INLAPLDPEARV
        AS P  +  + + PL+PE RV
Subjt:  ASPPPPA--INLAPLDPEARV

AT1G49220.1 RING/U-box superfamily protein2.9e-4549.31Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RFVVSDETHP
        MSA  + S  Q         + SRKLLLH+     T  A A   V   PL ++      NV+M+LS+L+C +IC LGL+ IIRCAL+ S RF++S+    
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RFVVSDETHP

Query:  SSTT--AAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG-----VSG
         S+T  ++  G+ KKA++ F +V +S ++NLPGLD ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+T QKI G      S 
Subjt:  SSTT--AAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG-----VSG

Query:  PASPPPPAI-NLAPLDP
         A P    I  + PL+P
Subjt:  PASPPPPAI-NLAPLDP

AT1G49230.1 RING/U-box superfamily protein9.3e-5256Show/hide
Query:  YSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD---ETHPSSTTAAPVGVHKKAIKSFTMV
        YSRKLL H+   + T    APS      +    FD NVVMVLSVLLCAL+CSLGLNSIIRCAL+CS  V S+   + +P   T    GV +KA+KSF  V
Subjt:  YSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD---ETHPSSTTAAPVGVHKKAIKSFTMV

Query:  QFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPAS-----PPPPAI--NLAPLDPEARVR
         +S++LNLPGLD+EC ICLS+FV  E+++LLP C+HGFHV+CIDKWLSSHSSCP CR CL+QT +KIA  S  +S     PP  +I   +APL+PE  +R
Subjt:  QFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPAS-----PPPPAI--NLAPLDPEARVR

AT3G18773.1 RING/U-box superfamily protein1.3e-4248Show/hide
Query:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-FVVSDETHPSST---TAAPVGVHKKAIKSFT
        + SRKL     L  + F  +A  +  H P +      NV+M+LS+LLC +ICSLGL+ IIRCA   SR F++SD     ST   ++   G+ KKA+K   
Subjt:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-FVVSDETHPSST---TAAPVGVHKKAIKSFT

Query:  MVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPA------INLAPLDPEARV
        +V +S ++NLPG+  ECVICLSDFV GE+LR+LPKCNHGFH++CIDKWL+ H +CPKCR CLV T QK+      A            I ++PL+PEARV
Subjt:  MVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPA------INLAPLDPEARV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCTGTTTCCATTTCTTCACCTCATCAGCTCATTCACCATGGAGATCAAGTGTTCTATTATTCAAGAAAGCTCCTCCTTCACTCCTCCCTCCACGCGCTCACCTT
CACCGCCGACGCTCCCTCCTCCGTCCTACACCGCCCACTCGAATCCTACACCTTCGATACCAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATTTGCTCAT
TAGGTCTCAACTCCATCATCAGATGCGCTTTGAAATGCTCTCGTTTTGTTGTCTCTGACGAAACTCACCCCTCCTCCACCACCGCCGCCCCCGTCGGAGTCCACAAGAAA
GCCATCAAGAGCTTCACTATGGTTCAATTCTCCTCGGATCTCAATCTCCCTGGGCTTGACTCCGAGTGCGTTATTTGCTTGTCAGACTTCGTCGATGGCGAGAAGCTTCG
GCTTCTCCCCAAGTGCAACCATGGCTTCCATGTTAAGTGTATTGATAAATGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGCCAGTGTTTAGTCCAAACTTCTCAGA
AAATCGCCGGGGTTAGCGGTCCGGCGTCTCCTCCTCCTCCGGCCATCAACTTAGCACCGCTAGATCCCGAAGCTCGGGTACGGAATTTATGGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCTGTTTCCATTTCTTCACCTCATCAGCTCATTCACCATGGAGATCAAGTGTTCTATTATTCAAGAAAGCTCCTCCTTCACTCCTCCCTCCACGCGCTCACCTT
CACCGCCGACGCTCCCTCCTCCGTCCTACACCGCCCACTCGAATCCTACACCTTCGATACCAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATTTGCTCAT
TAGGTCTCAACTCCATCATCAGATGCGCTTTGAAATGCTCTCGTTTTGTTGTCTCTGACGAAACTCACCCCTCCTCCACCACCGCCGCCCCCGTCGGAGTCCACAAGAAA
GCCATCAAGAGCTTCACTATGGTTCAATTCTCCTCGGATCTCAATCTCCCTGGGCTTGACTCCGAGTGCGTTATTTGCTTGTCAGACTTCGTCGATGGCGAGAAGCTTCG
GCTTCTCCCCAAGTGCAACCATGGCTTCCATGTTAAGTGTATTGATAAATGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGCCAGTGTTTAGTCCAAACTTCTCAGA
AAATCGCCGGGGTTAGCGGTCCGGCGTCTCCTCCTCCTCCGGCCATCAACTTAGCACCGCTAGATCCCGAAGCTCGGGTACGGAATTTATGGCTGTAA
Protein sequenceShow/hide protein sequence
MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDETHPSSTTAAPVGVHKK
AIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVSGPASPPPPAINLAPLDPEARVRNLWL