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Carg24342 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24342
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionZinc/iron-chelating domain protein
Genome locationCarg_Chr07:5282044..5283882
RNA-Seq ExpressionCarg24342
SyntenyCarg24342
Gene Ontology termsNA
InterPro domainsIPR005358 - Putative zinc- or iron-chelating domain containing protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008447323.1 PREDICTED: uncharacterized protein LOC103489795 [Cucumis melo]5.6e-7584.38Show/hide
Query:  VAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRKCSIY
        VAPPQ+TV AAR+ ++I TK+++T QGR TN GF GKRKE+LWQC+EGCGACCKLAKG SFASPEEIFQN SDIELYKSLIG DGWCIHYEK++RKCSIY
Subjt:  VAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRKCSIY

Query:  ADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSES
        ADRPYFCRVESPVFEKLYGIKENKFNK ACSSCRDTIKAIYGF SKELE FNKAVQ SES
Subjt:  ADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSES

XP_022963069.1 uncharacterized protein LOC111463379 [Cucurbita moschata]3.3e-91100Show/hide
Query:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
        MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
Subjt:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK

Query:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA
        CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA
Subjt:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA

XP_022972574.1 uncharacterized protein LOC111471122 [Cucurbita maxima]3.4e-8895.76Show/hide
Query:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
        MLHMVAPPQ+TVIAARRSKQ+PTK  ET+QGRRTN GFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
Subjt:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK

Query:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA
        CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIK IYGFQSKELEGFNKAVQGSESA
Subjt:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA

XP_023518453.1 uncharacterized protein LOC111781942 [Cucurbita pepo subsp. pepo]1.2e-9099.39Show/hide
Query:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
        MLHMVAPPQLTVIAARRSKQIPTK+TETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
Subjt:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK

Query:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA
        CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA
Subjt:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA

XP_038883478.1 uncharacterized protein LOC120074431 [Benincasa hispida]7.3e-7583.54Show/hide
Query:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
        M   VAPPQ+++ AARR +QI TK+ +  QGR  N GF  KRKE+LWQCVEGCGACCKLAKGPSFASPEEIFQN SDIELYKSLIGADGWCIHYEKS+RK
Subjt:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK

Query:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSES
        CSIYADRPYFCRVESPVFEKLYGIKENKFNK ACSSCRDTIKAIYGF SKELE FNKAVQ SES
Subjt:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSES

TrEMBL top hitse value%identityAlignment
A0A1S3BH68 uncharacterized protein LOC1034897952.7e-7584.38Show/hide
Query:  VAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRKCSIY
        VAPPQ+TV AAR+ ++I TK+++T QGR TN GF GKRKE+LWQC+EGCGACCKLAKG SFASPEEIFQN SDIELYKSLIG DGWCIHYEK++RKCSIY
Subjt:  VAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRKCSIY

Query:  ADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSES
        ADRPYFCRVESPVFEKLYGIKENKFNK ACSSCRDTIKAIYGF SKELE FNKAVQ SES
Subjt:  ADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSES

A0A5A7TWI1 Flagellin N-methylase2.7e-7584.38Show/hide
Query:  VAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRKCSIY
        VAPPQ+TV AAR+ ++I TK+++T QGR TN GF GKRKE+LWQC+EGCGACCKLAKG SFASPEEIFQN SDIELYKSLIG DGWCIHYEK++RKCSIY
Subjt:  VAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRKCSIY

Query:  ADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSES
        ADRPYFCRVESPVFEKLYGIKENKFNK ACSSCRDTIKAIYGF SKELE FNKAVQ SES
Subjt:  ADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSES

A0A6J1CQF1 uncharacterized protein LOC111013629 isoform X13.3e-7382.5Show/hide
Query:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
        M   VAPP++TV AARR +QI TK+ +T +GR  N GF GKRKE+LWQCVEGCGACCKLA GPSFA+PEEIF+N SDIELYKSLIGADGWCIHYEKS+RK
Subjt:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK

Query:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQ
        CSIYADRPYFCRVESPVFEKLYGIKENKFNK ACSSCRDTIKA+YGF SKELE FNKAVQ
Subjt:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQ

A0A6J1HIY7 uncharacterized protein LOC1114633791.6e-91100Show/hide
Query:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
        MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
Subjt:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK

Query:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA
        CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA
Subjt:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA

A0A6J1I6C5 uncharacterized protein LOC1114711221.6e-8895.76Show/hide
Query:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
        MLHMVAPPQ+TVIAARRSKQ+PTK  ET+QGRRTN GFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK
Subjt:  MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRK

Query:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA
        CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIK IYGFQSKELEGFNKAVQGSESA
Subjt:  CSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02710.1 unknown protein4.6e-5156.02Show/hide
Query:  APPQLTVIAARRSKQIPTKNTE-----TKQGRRTNAGFAGKRKEEL-WQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSR
        AP   T+I+A R  Q+     +      K+   + +GF+G   +EL W+CVEGCGACCK+AK  SFA+P+EIF NP D+ELY+S+IG DGWC++Y+K++R
Subjt:  APPQLTVIAARRSKQIPTKNTE-----TKQGRRTNAGFAGKRKEEL-WQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSR

Query:  KCSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA
        KCSIYADRPYFCRVE  VF+ LYGI+E KFNK A S C DTIK IYG  SKEL+ FN+A++ + S+
Subjt:  KCSIYADRPYFCRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCACATGGTGGCTCCGCCGCAACTCACCGTAATCGCTGCTCGCCGGTCGAAGCAGATTCCGACGAAGAATACCGAGACCAAGCAAGGGCGGAGGACCAATGCAGG
GTTCGCAGGCAAAAGAAAGGAGGAATTATGGCAGTGCGTCGAGGGATGCGGCGCCTGCTGCAAGCTTGCCAAGGGGCCTTCCTTCGCCTCGCCAGAGGAAATCTTCCAGA
ATCCATCCGATATCGAGCTATACAAAAGCTTGATTGGCGCAGATGGATGGTGCATTCACTACGAGAAGAGTTCACGTAAATGCTCCATCTACGCCGATCGACCATATTTT
TGCCGTGTAGAGTCTCCTGTGTTTGAAAAATTATATGGAATCAAAGAAAACAAGTTCAACAAGGTTGCTTGCAGTAGCTGCAGGGACACCATAAAAGCAATCTATGGCTT
CCAGTCCAAGGAATTGGAAGGCTTCAACAAGGCAGTTCAGGGCTCTGAGTCTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCCACATGGTGGCTCCGCCGCAACTCACCGTAATCGCTGCTCGCCGGTCGAAGCAGATTCCGACGAAGAATACCGAGACCAAGCAAGGGCGGAGGACCAATGCAGG
GTTCGCAGGCAAAAGAAAGGAGGAATTATGGCAGTGCGTCGAGGGATGCGGCGCCTGCTGCAAGCTTGCCAAGGGGCCTTCCTTCGCCTCGCCAGAGGAAATCTTCCAGA
ATCCATCCGATATCGAGCTATACAAAAGCTTGATTGGCGCAGATGGATGGTGCATTCACTACGAGAAGAGTTCACGTAAATGCTCCATCTACGCCGATCGACCATATTTT
TGCCGTGTAGAGTCTCCTGTGTTTGAAAAATTATATGGAATCAAAGAAAACAAGTTCAACAAGGTTGCTTGCAGTAGCTGCAGGGACACCATAAAAGCAATCTATGGCTT
CCAGTCCAAGGAATTGGAAGGCTTCAACAAGGCAGTTCAGGGCTCTGAGTCTGCATAGAATGCTCAAAGATGGAAGTTCGAACATTTGACTTTTGGAGCAAAAGTGCTTG
TTAATTACTCTCGAGGGAATTGATTTATACAAATGAAGAATTACGTACATTTGGAGATAGTTCTTCTCTTATTTAGGCTCGATAATATTCTTAATATCGATTCTCAAATT
TGAAAACACTTCGATTCTTAGAATTTTCATAGAAGTAATAATTTATTCTTAAATTTTTGCTGGTATAATGTAGTTCTTGGACAATGATGAAAATTTTAGCCTGTAACAAT
TTAGTATTTGTACTTTATCAATTCGATTTTTACTATATAATAAATCTTTATCGTTTATAAACACATT
Protein sequenceShow/hide protein sequence
MLHMVAPPQLTVIAARRSKQIPTKNTETKQGRRTNAGFAGKRKEELWQCVEGCGACCKLAKGPSFASPEEIFQNPSDIELYKSLIGADGWCIHYEKSSRKCSIYADRPYF
CRVESPVFEKLYGIKENKFNKVACSSCRDTIKAIYGFQSKELEGFNKAVQGSESA