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Carg24360 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24360
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUNC93-like protein 3
Genome locationCarg_Chr07:5432343..5432693
RNA-Seq ExpressionCarg24360
SyntenyCarg24360
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032619.1 uncharacterized protein E6C27_scaffold184G00030 [Cucumis melo var. makuwa]1.2e-4789.47Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
        MLR LYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G VRVPMD PGDV+CVPD LFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDD
        ACFVRALGLWADD+
Subjt:  ACFVRALGLWADDD

XP_004142209.1 uncharacterized protein LOC101207834 [Cucumis sativus]3.2e-4890.35Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
        MLR LYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G VRVPMD PGDV+CVPD LFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDD
        ACFVRALGLWADDD
Subjt:  ACFVRALGLWADDD

XP_022963374.1 uncharacterized protein LOC111463600 [Cucurbita moschata]3.5e-55100Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
        MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDDSL
        ACFVRALGLWADDDSL
Subjt:  ACFVRALGLWADDDSL

XP_022972738.1 uncharacterized protein LOC111471253 [Cucurbita maxima]1.3e-5499.14Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
        MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPM+FPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDDSL
        ACFVRALGLWADDDSL
Subjt:  ACFVRALGLWADDDSL

XP_038883336.1 uncharacterized protein LOC120074319 [Benincasa hispida]9.8e-5090.52Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
        MLR LYRRL+SRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSF +HCK+ G VRVPMD PGDV+CVPD LFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDDSL
        ACFVRALGLWADDD+L
Subjt:  ACFVRALGLWADDDSL

TrEMBL top hitse value%identityAlignment
A0A0A0L0V5 Uncharacterized protein1.5e-4890.35Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
        MLR LYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G VRVPMD PGDV+CVPD LFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDD
        ACFVRALGLWADDD
Subjt:  ACFVRALGLWADDD

A0A5A7STU5 Uncharacterized protein5.8e-4889.47Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
        MLR LYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G VRVPMD PGDV+CVPD LFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDD
        ACFVRALGLWADD+
Subjt:  ACFVRALGLWADDD

A0A6J1CRS0 uncharacterized protein LOC1110136702.3e-4484.17Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKA------AGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAA
        MLR L+RRLRSRWPLLVYSASWTILLTLTVA ASFAPELAFASAISPSSSFA+ CKA       G VRVPMD PGDV+CVPD LFRKS IDLIVPPIFAA
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKA------AGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAA

Query:  VVVAGSACFVRALGLWADDD
        VVVAGSAC VRA GLWADDD
Subjt:  VVVAGSACFVRALGLWADDD

A0A6J1HJX3 uncharacterized protein LOC1114636001.7e-55100Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
        MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDDSL
        ACFVRALGLWADDDSL
Subjt:  ACFVRALGLWADDDSL

A0A6J1IAZ3 uncharacterized protein LOC1114712536.4e-5599.14Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
        MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPM+FPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDDSL
        ACFVRALGLWADDDSL
Subjt:  ACFVRALGLWADDDSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07795.1 unknown protein4.1e-2250Show/hide
Query:  RRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRA
        R +  RWP++  +A+WT+LL  TVA ASFAPE+AF S +S S          GFV++PMDF G+ +CVP N+ ++S  DL VP IFAAV+V  SAC +R+
Subjt:  RRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRA

AT2G28725.1 unknown protein6.8e-1743.14Show/hide
Query:  LYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFV
        +  +  +RW +LV +A+WTILL +TVA ASFAPE+AF S +  SS         GFVR+PMD PG+++ +P  + + S +D+ +P IFA V+V  S   +
Subjt:  LYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFV

Query:  RA
        R+
Subjt:  RA

AT2G37530.1 unknown protein1.1e-2552.99Show/hide
Query:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSS--FASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVA
        M   L  R   R P  VY A+WT+ LTLTVA  S APE AF SAI PSSS  F+  C +   + VP+D P +V+C+P NLFR+S +DL+VPP+FAA+VVA
Subjt:  MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSS--FASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVA

Query:  GSACFVRALGLWADDDS
         SA  VR +GLW  D++
Subjt:  GSACFVRALGLWADDDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCGATTACTATACCGTCGTCTCCGATCGCGGTGGCCGCTTCTTGTCTACTCCGCCTCCTGGACGATTCTCTTGACTCTCACCGTCGCCGCCGCCTCCTTCGCGCC
CGAGCTCGCCTTCGCCTCCGCAATTTCTCCGTCCTCGTCCTTTGCTTCACACTGCAAGGCCGCTGGATTCGTTAGGGTTCCGATGGATTTTCCGGGAGACGTCGTCTGCG
TTCCGGATAATCTGTTTCGGAAATCCGGAATTGATCTCATCGTGCCTCCTATTTTCGCCGCGGTTGTAGTAGCCGGGTCGGCTTGCTTTGTTCGGGCCTTGGGCCTTTGG
GCCGACGATGACTCCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCGATTACTATACCGTCGTCTCCGATCGCGGTGGCCGCTTCTTGTCTACTCCGCCTCCTGGACGATTCTCTTGACTCTCACCGTCGCCGCCGCCTCCTTCGCGCC
CGAGCTCGCCTTCGCCTCCGCAATTTCTCCGTCCTCGTCCTTTGCTTCACACTGCAAGGCCGCTGGATTCGTTAGGGTTCCGATGGATTTTCCGGGAGACGTCGTCTGCG
TTCCGGATAATCTGTTTCGGAAATCCGGAATTGATCTCATCGTGCCTCCTATTTTCGCCGCGGTTGTAGTAGCCGGGTCGGCTTGCTTTGTTCGGGCCTTGGGCCTTTGG
GCCGACGATGACTCCCTCTGA
Protein sequenceShow/hide protein sequence
MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGFVRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLW
ADDDSL