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Carg24372 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24372
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description3-oxo-5-alpha-steroid 4-dehydrogenase family protein
Genome locationCarg_Chr07:5486465..5488164
RNA-Seq ExpressionCarg24372
SyntenyCarg24372
Gene Ontology termsGO:0006629 - lipid metabolic process (biological process)
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors (molecular function)
InterPro domainsIPR001104 - 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027329.1 Very-long-chain enoyl-CoA reductase, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-19100Show/hide
Query:  MKIETVVEREATKFHVGFLSFHVVTYANYTTEIHQWLGFNIATQTVLVIFL
        MKIETVVEREATKFHVGFLSFHVVTYANYTTEIHQWLGFNIATQTVLVIFL
Subjt:  MKIETVVEREATKFHVGFLSFHVVTYANYTTEIHQWLGFNIATQTVLVIFL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
Q9M2U2 Very-long-chain enoyl-CoA reductase5.2e-0680Show/hide
Query:  GFLSFHVVTYANYTTEIHQWLGFNIATQTV
        GFL F++VT ANYTTEI+QWLGFNIATQT+
Subjt:  GFLSFHVVTYANYTTEIHQWLGFNIATQTV
Arabidopsis top hitse value%identityAlignment
AT3G55360.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein3.7e-0780Show/hide
Query:  GFLSFHVVTYANYTTEIHQWLGFNIATQTV
        GFL F++VT ANYTTEI+QWLGFNIATQT+
Subjt:  GFLSFHVVTYANYTTEIHQWLGFNIATQTV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTGAGACCGTAGTGGAAAGGGAGGCTACAAAATTCCACGTGGGTTTCCTTTCCTTTCATGTTGTAACTTATGCCAACTACACAACTGAGATTCACCAATGGCT
GGGATTCAATATCGCAACACAAACTGTGCTGGTTATATTTTTG
mRNA sequenceShow/hide mRNA sequence
ACATTTCGTCCACATTTAGTCCAATCAATGAAGGTCTCCATTGTTTCCAGGAGTGGTAGAGAAAATCATCGCTGCCGGCCTTCAGATCGATGATTCGAGGAGCGTCATAC
CTACCCTGTTCAGACCGGATCATGTAGAACTTCTTGTTCATAGGCTTAGTCATACAGCTTCACCCTTGTCAAGTGTCTTCCGTAACTACACGTATCATTGGAGTTTTGGA
GCTCTCATAGCGTACTACATAAACCACCCACTTTACACCCTGGTGTATGACCGCCAAATGAAGATTGAGACCGTAGTGGAAAGGGAGGCTACAAAATTCCACGTGGGTTT
CCTTTCCTTTCATGTTGTAACTTATGCCAACTACACAACTGAGATTCACCAATGGCTGGGATTCAATATCGCAACACAAACTGTGCTGGTTATATTTTTG
Protein sequenceShow/hide protein sequence
MKIETVVEREATKFHVGFLSFHVVTYANYTTEIHQWLGFNIATQTVLVIFL