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Carg24376 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24376
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:4181129..4183336
RNA-Seq ExpressionCarg24376
SyntenyCarg24376
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593514.1 hypothetical protein SDJN03_12990, partial [Cucurbita argyrosperma subsp. sororia]5.9e-7480.39Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
        MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPR         K+R  +F+   +  T +                 +RYKFIWPMLLTVNLGV
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV

Query:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
        GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
Subjt:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS

Query:  VPNL
        VPNL
Subjt:  VPNL

KAG7025859.1 hypothetical protein SDJN02_12357, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-104100Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
        MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV

Query:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
        GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
Subjt:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS

Query:  VPNL
        VPNL
Subjt:  VPNL

XP_022964000.1 uncharacterized protein LOC111464152 isoform X1 [Cucurbita moschata]3.9e-10298.53Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
        MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQD HKVR ASFSPAPQV TNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV

Query:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
        GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
Subjt:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS

Query:  VPNL
        VPNL
Subjt:  VPNL

XP_022964001.1 uncharacterized protein LOC111464152 isoform X2 [Cucurbita moschata]1.8e-67100Show/hide
Query:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK
        MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK
Subjt:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK

Query:  WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
        WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
Subjt:  WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL

XP_023000402.1 uncharacterized protein LOC111494662 [Cucurbita maxima]1.1e-7295Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASS-PPLPPPTKEPFARRYKFIWPMLLTVNLG
        MATEGRSQMS QIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQD HKVRDASFSPAPQV TNMGSASS PP PPP KEPFARRYKFIWPMLLTVNL 
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASS-PPLPPPTKEPFARRYKFIWPMLLTVNLG

Query:  VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQ
        VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLAR AIVEPVKVREPIPVDQ
Subjt:  VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQ

TrEMBL top hitse value%identityAlignment
A0A1S3CIB4 uncharacterized protein LOC103500733 isoform X14.7e-6174.86Show/hide
Query:  ELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTA
        +L ++ PT   ++ QFQ+ HK  DAS S +  + +   S+SSPP P P KE FARRYKF+WPMLLTVNL VGAY+FMRTKKQDEH VAEEEAA DSAKT 
Subjt:  ELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTA

Query:  RIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
        +IAAPVVEESLA+PAIVEPVKVREPIPVDQQRELFKWILEEKRKI PKDR+EKKR+DEEKAILKEFIRAKS+PN+
Subjt:  RIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL

A0A6J1HHM5 uncharacterized protein LOC111464152 isoform X28.9e-68100Show/hide
Query:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK
        MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK
Subjt:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK

Query:  WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
        WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
Subjt:  WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL

A0A6J1HJK4 uncharacterized protein LOC111464152 isoform X11.9e-10298.53Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
        MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQD HKVR ASFSPAPQV TNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV

Query:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
        GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
Subjt:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS

Query:  VPNL
        VPNL
Subjt:  VPNL

A0A6J1KDJ6 uncharacterized protein LOC1114946625.4e-7395Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASS-PPLPPPTKEPFARRYKFIWPMLLTVNLG
        MATEGRSQMS QIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQD HKVRDASFSPAPQV TNMGSASS PP PPP KEPFARRYKFIWPMLLTVNL 
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASS-PPLPPPTKEPFARRYKFIWPMLLTVNLG

Query:  VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQ
        VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLAR AIVEPVKVREPIPVDQ
Subjt:  VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQ

E5GCA6 Uncharacterized protein8.9e-6074.86Show/hide
Query:  ELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTA
        +L ++ PT   ++ QFQ+ HK  DAS S +  + +   S+SSPP P P KE FARRYKF+WPMLLTVNL VGAY+FMRTKKQDEH VAEEEAA DSAKT 
Subjt:  ELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTA

Query:  RIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
        +IAAPVVEESLA+PAIVEPVKVREPIPVDQQRELFKWILEEKRKI PKDR+EKKR+DEEKAILKEFIRAKS+PN+
Subjt:  RIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55160.1 unknown protein2.9e-3963.57Show/hide
Query:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPV-VEESLARPAIVEPV--KVREPIPVDQQRE
        MG  S PP PPP KE FARRYK++WP+LLTVNL VG YLF RTKK+D   V EE A    AK++ +AAPV VE++L+   + EPV  K REPIP  QQRE
Subjt:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPV-VEESLARPAIVEPV--KVREPIPVDQQRE

Query:  LFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP
        LFKW+LEEKRK+NPK+ +EKKR DEEKAILK+FI +K++P
Subjt:  LFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP

AT1G55160.2 unknown protein2.9e-3963.57Show/hide
Query:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPV-VEESLARPAIVEPV--KVREPIPVDQQRE
        MG  S PP PPP KE FARRYK++WP+LLTVNL VG YLF RTKK+D   V EE A    AK++ +AAPV VE++L+   + EPV  K REPIP  QQRE
Subjt:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPV-VEESLARPAIVEPV--KVREPIPVDQQRE

Query:  LFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP
        LFKW+LEEKRK+NPK+ +EKKR DEEKAILK+FI +K++P
Subjt:  LFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP

AT1G55160.3 unknown protein3.4e-3553.94Show/hide
Query:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG-------------------------AYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPV-VEES
        MG  S PP PPP KE FARRYK++WP+LLTVNL VG                         +YLF RTKK+D   V EE A    AK++ +AAPV VE++
Subjt:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG-------------------------AYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPV-VEES

Query:  LARPAIVEPV--KVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP
        L+   + EPV  K REPIP  QQRELFKW+LEEKRK+NPK+ +EKKR DEEKAILK+FI +K++P
Subjt:  LARPAIVEPV--KVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP

AT2G19530.1 unknown protein8.3e-1838.04Show/hide
Query:  SSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQD-----------------------------EHDVAEEEAASDSAKTARIAAPVVEE--
        SSP    P ++  ++  K  W   +  NLG  AY+F   +++D                             E   AEE   +D AK A  A P  EE  
Subjt:  SSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQD-----------------------------EHDVAEEEAASDSAKTARIAAPVVEE--

Query:  -----------------SLARPAIVEPVKV-REPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
                         S+ +    E VKV R+PIP D+Q+ELFKWILEEKRKI PKDR EKK++DEEKAILK+FIRA+ +P L
Subjt:  -----------------SLARPAIVEPVKV-REPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGAGGGAAGAAGCCAAATGAGCCGTCAAATACAGAAGACTGAGAAAAAGGGAACTCGCAGTGATCGGAGATGGGCGAAGGAACTCCTAAGCTCTACGCCAAC
TAACCCAAGAAAGGTTGTGCAATTTCAAGATCTGCACAAAGTCAGAGACGCTTCTTTTTCACCGGCGCCACAAGTATTGACGAACATGGGATCTGCGTCTTCCCCACCGC
TGCCTCCTCCAACAAAGGAACCATTTGCAAGGCGATATAAGTTCATATGGCCCATGCTTTTGACTGTAAACCTTGGTGTTGGAGCTTATCTGTTTATGAGGACAAAGAAG
CAAGATGAACATGATGTAGCTGAAGAAGAGGCTGCCTCGGATTCAGCTAAAACTGCCAGGATTGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAGCCATTGTGGA
GCCAGTGAAGGTAAGGGAACCAATTCCGGTGGATCAGCAGCGTGAGCTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATAAACCCTAAAGATCGTGATGAGAAGAAGC
GCATGGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCAGAGCAAAATCTGTTCCAAATCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTGAGGGAAGAAGCCAAATGAGCCGTCAAATACAGAAGACTGAGAAAAAGGGAACTCGCAGTGATCGGAGATGGGCGAAGGAACTCCTAAGCTCTACGCCAAC
TAACCCAAGAAAGGTTGTGCAATTTCAAGATCTGCACAAAGTCAGAGACGCTTCTTTTTCACCGGCGCCACAAGTATTGACGAACATGGGATCTGCGTCTTCCCCACCGC
TGCCTCCTCCAACAAAGGAACCATTTGCAAGGCGATATAAGTTCATATGGCCCATGCTTTTGACTGTAAACCTTGGTGTTGGAGCTTATCTGTTTATGAGGACAAAGAAG
CAAGATGAACATGATGTAGCTGAAGAAGAGGCTGCCTCGGATTCAGCTAAAACTGCCAGGATTGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAGCCATTGTGGA
GCCAGTGAAGGTAAGGGAACCAATTCCGGTGGATCAGCAGCGTGAGCTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATAAACCCTAAAGATCGTGATGAGAAGAAGC
GCATGGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCAGAGCAAAATCTGTTCCAAATCTTTAA
Protein sequenceShow/hide protein sequence
MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDLHKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKK
QDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL