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Carg24401 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24401
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome oxidase assembly protein
Genome locationCarg_Chr04:10704255..10705409
RNA-Seq ExpressionCarg24401
SyntenyCarg24401
Gene Ontology termsGO:0006535 - cysteine biosynthetic process from serine (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601607.1 hypothetical protein SDJN03_06840, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2098.18Show/hide
Query:  QGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
        +GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
Subjt:  QGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
KAG7032365.1 hypothetical protein SDJN02_06410, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-45100Show/hide
Query:  MLLYEVYAHECDHDKNPNLDPVSCGHQQYPIFVVSNQGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
        MLLYEVYAHECDHDKNPNLDPVSCGHQQYPIFVVSNQGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
Subjt:  MLLYEVYAHECDHDKNPNLDPVSCGHQQYPIFVVSNQGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
XP_016900171.1 PREDICTED: uncharacterized protein LOC103488878 [Cucumis melo]5.9e-1892.59Show/hide
Query:  GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
        GL PKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAID+FEAQK NK+SNV
Subjt:  GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
XP_022956375.1 uncharacterized protein LOC111458133 [Cucurbita moschata]2.9e-2098.18Show/hide
Query:  QGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
        +GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
Subjt:  QGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
XP_038891345.1 uncharacterized protein LOC120080790 [Benincasa hispida]5.9e-1892.59Show/hide
Query:  QGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSN
        +GL PKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQK +KDSN
Subjt:  QGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSN
TrEMBL top hitse value%identityAlignment
A0A0A0KPU8 Uncharacterized protein3.8e-1892.59Show/hide
Query:  GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
        GL PKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFE+QK NK+SNV
Subjt:  GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
A0A1S4DW05 uncharacterized protein LOC1034888782.9e-1892.59Show/hide
Query:  GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
        GL PKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAID+FEAQK NK+SNV
Subjt:  GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
A0A5A7SUP4 Uncharacterized protein2.9e-1892.59Show/hide
Query:  GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
        GL PKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAID+FEAQK NK+SNV
Subjt:  GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
A0A6J1GXM1 uncharacterized protein LOC1114581331.4e-2098.18Show/hide
Query:  QGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
        +GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
Subjt:  QGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
A0A6J1KHY0 uncharacterized protein LOC1114933811.4e-2098.18Show/hide
Query:  QGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
        +GLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
Subjt:  QGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43780.1 unknown protein2.7e-1686.96Show/hide
Query:  LAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQK
        L PK KN VVAGGLTAFVFGVYFYTMRAVGG+DELQVAID+FE QK
Subjt:  LAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQK
AT2G43780.2 unknown protein2.7e-1686.96Show/hide
Query:  LAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQK
        L PK KN VVAGGLTAFVFGVYFYTMRAVGG+DELQVAID+FE QK
Subjt:  LAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTGTATGAAGTTTATGCACATGAGTGTGATCATGATAAGAACCCAAACCTGGACCCTGTTTCATGTGGACATCAGCAGTATCCTATTTTTGTAGTGTCCAACCA
GGGCCTTGCACCCAAGACAAAGAATATTGTTGTTGCTGGAGGTTTAACTGCCTTCGTGTTTGGGGTTTATTTCTACACAATGAGAGCTGTTGGAGGCTCCGATGAACTGC
AAGTAGCCATAGACCAGTTTGAAGCGCAGAAAGACAACAAGGATTCGAACGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGCTGTATGAAGTTTATGCACATGAGTGTGATCATGATAAGAACCCAAACCTGGACCCTGTTTCATGTGGACATCAGCAGTATCCTATTTTTGTAGTGTCCAACCA
GGGCCTTGCACCCAAGACAAAGAATATTGTTGTTGCTGGAGGTTTAACTGCCTTCGTGTTTGGGGTTTATTTCTACACAATGAGAGCTGTTGGAGGCTCCGATGAACTGC
AAGTAGCCATAGACCAGTTTGAAGCGCAGAAAGACAACAAGGATTCGAACGTGTAG
Protein sequenceShow/hide protein sequence
MLLYEVYAHECDHDKNPNLDPVSCGHQQYPIFVVSNQGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKDSNV