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Carg24438 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24438
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc_ribbon_15 domain-containing protein
Genome locationCarg_Chr04:18405358..18405696
RNA-Seq ExpressionCarg24438
SyntenyCarg24438
Gene Ontology termsNA
InterPro domainsIPR031493 - Zinc-ribbon 15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602097.1 hypothetical protein SDJN03_07330, partial [Cucurbita argyrosperma subsp. sororia]7.5e-63100Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
        MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCGSSL
Subjt:  DFSFCPFCGSSL

XP_022962458.1 uncharacterized protein LOC111462885 [Cucurbita moschata]5.4e-6197.32Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
        MFFF VGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSP PISDQLPPS ALLRALRCHSCNKVVEP
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCGSSL
Subjt:  DFSFCPFCGSSL

XP_022992997.1 uncharacterized protein LOC111489157 [Cucurbita maxima]1.6e-5285.71Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
        MFFF VGGLEQQVR LLK+ AGRCI+CNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFPRSFSP PISDQ  P  AL R LRC SCNKVVEP
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCG SL
Subjt:  DFSFCPFCGSSL

XP_023541925.1 uncharacterized protein LOC111801919 [Cucurbita pepo subsp. pepo]1.2e-6096.43Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
        MFFF VGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSP PISDQLPPS ALLRALRCHSCNKVVEP
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCGSS+
Subjt:  DFSFCPFCGSSL

XP_038884584.1 uncharacterized protein LOC120075351 [Benincasa hispida]2.4e-5384.82Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
        MFFF VGGL+QQVR ++K+ AGRCI+CNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFP+SFSP PISDQ  PS ALLRAL C SCN+VVEP
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCP+CGSSL
Subjt:  DFSFCPFCGSSL

TrEMBL top hitse value%identityAlignment
A0A0A0KDD6 zinc_ribbon_15 domain-containing protein7.1e-5184.82Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
        MFFF VGGLEQQVR LLK+GA RCI+CNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFP+S SP   SDQ   S  LLRALRC SCNKVVEP
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCP+CGSSL
Subjt:  DFSFCPFCGSSL

A0A6J1CIA7 uncharacterized protein LOC1110118761.2e-5082.3Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPS-TALLRALRCHSCNKVVE
        MFFF  GGLEQQVR LLK+GAGRCI CNSPADLVDYEKVLKLFF PVWRWPGKEPLMHCNNCKLFFP+S SP P+SDQLPP+  AL + LRC SCN++VE
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPS-TALLRALRCHSCNKVVE

Query:  PDFSFCPFCGSSL
        P FSFCPFCGSSL
Subjt:  PDFSFCPFCGSSL

A0A6J1FFV9 uncharacterized protein LOC1114451042.4e-5183.93Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
        MFFF VGGLEQQVR LLK+ AGRCI+CNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFP SFSP PISDQ  P  A  R LRC SCNKVVEP
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        +FSFCPFCGSSL
Subjt:  DFSFCPFCGSSL

A0A6J1HEV4 uncharacterized protein LOC1114628852.6e-6197.32Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
        MFFF VGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSP PISDQLPPS ALLRALRCHSCNKVVEP
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCGSSL
Subjt:  DFSFCPFCGSSL

A0A6J1JRI4 uncharacterized protein LOC1114891577.6e-5385.71Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
        MFFF VGGLEQQVR LLK+ AGRCI+CNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFPRSFSP PISDQ  P  AL R LRC SCNKVVEP
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCG SL
Subjt:  DFSFCPFCGSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G44414.1 unknown protein1.1e-4063.39Show/hide
Query:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP
        MFFF VGGL QQVR +LK+GAG CI C S ADLV+Y+KV+KLFFVPVWRWPGK+PL+HC +C LFFP+S SP P+S              C  C++VVEP
Subjt:  MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        +F FCPFCGSSL
Subjt:  DFSFCPFCGSSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCTTCTTGGTCGGAGGGTTAGAGCAACAAGTCCGCCATCTCTTGAAAGCCGGTGCCGGCCGATGCATAAGCTGCAACTCACCGGCCGATCTCGTAGACTACGA
AAAAGTTCTGAAGCTCTTCTTTGTTCCAGTGTGGCGGTGGCCGGGAAAAGAGCCGTTGATGCACTGCAACAACTGTAAGCTGTTTTTCCCTCGGTCATTCTCACCGCGGC
CTATTTCCGATCAATTGCCGCCGTCCACCGCTCTTTTGAGGGCCCTTCGTTGCCATTCCTGTAACAAAGTAGTGGAGCCCGATTTCAGCTTCTGCCCTTTCTGTGGCTCT
TCTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTCTTCTTGGTCGGAGGGTTAGAGCAACAAGTCCGCCATCTCTTGAAAGCCGGTGCCGGCCGATGCATAAGCTGCAACTCACCGGCCGATCTCGTAGACTACGA
AAAAGTTCTGAAGCTCTTCTTTGTTCCAGTGTGGCGGTGGCCGGGAAAAGAGCCGTTGATGCACTGCAACAACTGTAAGCTGTTTTTCCCTCGGTCATTCTCACCGCGGC
CTATTTCCGATCAATTGCCGCCGTCCACCGCTCTTTTGAGGGCCCTTCGTTGCCATTCCTGTAACAAAGTAGTGGAGCCCGATTTCAGCTTCTGCCCTTTCTGTGGCTCT
TCTCTGTAA
Protein sequenceShow/hide protein sequence
MFFFLVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPRPISDQLPPSTALLRALRCHSCNKVVEPDFSFCPFCGS
SL